RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 NWD1Q149M9 1564 aa2.4□□□□□ -2.02
TOPBP1-210ENST00000572787 SERF2P84101 59 aa2.4□□□□□ -2.03
TOPBP1-210ENST00000572787 FAM208AQ9UK61 1670 aaKnown RBP2.4□□□□□ -2.03
TOPBP1-210ENST00000572787 RPL38P63173 70 aaKnown RBP2.39□□□□□ -2.03
TOPBP1-210ENST00000572787 KRTAP13-4Q3LI77 160 aa2.39□□□□□ -2.03
TOPBP1-210ENST00000572787 COL4A4P53420 1690 aaPredicted RBP2.38□□□□□ -2.03
TOPBP1-210ENST00000572787 SSC5DA1L4H1 1573 aa2.38□□□□□ -2.03
TOPBP1-210ENST00000572787 DEFB114Q30KQ6 69 aa2.38□□□□□ -2.03
TOPBP1-210ENST00000572787 ABRACLQ9P1F3 81 aa2.38□□□□□ -2.03
TOPBP1-210ENST00000572787 TRPM2O94759 1503 aa2.37□□□□□ -2.03
TOPBP1-210ENST00000572787 LRRC37AA6NMS7 1700 aa2.37□□□□□ -2.03
TOPBP1-210ENST00000572787 SPRR5A0A1B0GTR4 108 aa2.37□□□□□ -2.03
TOPBP1-210ENST00000572787 LY6G6CO95867 125 aa2.37□□□□□ -2.03
TOPBP1-210ENST00000572787 PLNP26678 52 aa2.37□□□□□ -2.03
TOPBP1-210ENST00000572787 SSBP3-AS1Q7Z2R9 100 aa2.37□□□□□ -2.03
TOPBP1-210ENST00000572787 K7EMI3 77 aa2.36□□□□□ -2.03
TOPBP1-210ENST00000572787 DEFB103AP81534 67 aa2.36□□□□□ -2.03
TOPBP1-210ENST00000572787 QSER1Q2KHR3 1735 aa2.36□□□□□ -2.03
TOPBP1-210ENST00000572787 RPL37P61927 97 aaKnown RBP2.35□□□□□ -2.03
TOPBP1-210ENST00000572787 DDX60LQ5H9U9 1706 aaKnown RBP2.34□□□□□ -2.03
TOPBP1-210ENST00000572787 NFAT5O94916 1531 aa2.34□□□□□ -2.03
TOPBP1-210ENST00000572787 KCNQ1DNQ9H478 68 aa2.34□□□□□ -2.03
TOPBP1-210ENST00000572787 TULP4Q9NRJ4 1543 aa2.33□□□□□ -2.04
TOPBP1-210ENST00000572787 MED13LQ71F56 2210 aa2.33□□□□□ -2.04
TOPBP1-210ENST00000572787 SMIM27A0A1W2PRY6 76 aa2.33□□□□□ -2.04
TOPBP1-210ENST00000572787 CPSF4LA6NMK7 179 aaKnown RBP2.33□□□□□ -2.04
TOPBP1-210ENST00000572787 BRD3OSQ6XYD6 125 aa2.33□□□□□ -2.04
TOPBP1-210ENST00000572787 ICE1Q9Y2F5 2266 aa2.33□□□□□ -2.04
TOPBP1-210ENST00000572787 M0R1W7 72 aa2.32□□□□□ -2.04
TOPBP1-210ENST00000572787 CDC42BPAQ5VT25 1732 aa2.31□□□□□ -2.04
TOPBP1-210ENST00000572787 ETDCA0A1B0GVM5 59 aa2.31□□□□□ -2.04
TOPBP1-210ENST00000572787 IGIPA6NJ69 53 aa2.31□□□□□ -2.04
TOPBP1-210ENST00000572787 ARL14EPLP0DKL9 152 aa2.31□□□□□ -2.04
TOPBP1-210ENST00000572787 KRTAP10-1P60331 282 aa2.31□□□□□ -2.04
TOPBP1-210ENST00000572787 KRTAP10-3P60369 221 aa2.3□□□□□ -2.04
TOPBP1-210ENST00000572787 KRTAP10-12P60413 245 aa2.3□□□□□ -2.04
TOPBP1-210ENST00000572787 UBE2DNLQ8IWF7 75 aa2.3□□□□□ -2.04
TOPBP1-210ENST00000572787 ZFHX3Q15911 3703 aa2.3□□□□□ -2.04
TOPBP1-210ENST00000572787 SPTY2D1-AS1A0A0U1RR47 76 aa2.29□□□□□ -2.04
TOPBP1-210ENST00000572787 I3L3M4 83 aa2.29□□□□□ -2.04
TOPBP1-210ENST00000572787 MRPL33O75394 65 aaKnown RBP2.29□□□□□ -2.04
TOPBP1-210ENST00000572787 PLXNB2O15031 1838 aa2.28□□□□□ -2.04
TOPBP1-210ENST00000572787 ANGP03950 147 aaKnown RBP2.28□□□□□ -2.04
TOPBP1-210ENST00000572787 PRB1P04280 392 aa2.28□□□□□ -2.04
TOPBP1-210ENST00000572787 LCE3CQ5T5A8 94 aa2.28□□□□□ -2.04
TOPBP1-210ENST00000572787 F5P12259 2224 aa2.27□□□□□ -2.05
TOPBP1-210ENST00000572787 CACNA1CQ13936 2221 aa2.27□□□□□ -2.05
TOPBP1-210ENST00000572787 A0A1B0GVY2 172 aa2.27□□□□□ -2.05
TOPBP1-210ENST00000572787 PRB2P02812 416 aaPredicted RBP2.27□□□□□ -2.05
TOPBP1-210ENST00000572787 COX6B1P14854 86 aa2.27□□□□□ -2.05
TOPBP1-210ENST00000572787 PCOTHQ58A44 107 aa2.27□□□□□ -2.05
TOPBP1-210ENST00000572787 LINC01546A6NGU7 62 aa2.26□□□□□ -2.05
TOPBP1-210ENST00000572787 DEPDC5O75140 1603 aa2.26□□□□□ -2.05
TOPBP1-210ENST00000572787 ATP7AQ04656 1500 aa2.26□□□□□ -2.05
TOPBP1-210ENST00000572787 ABCA1O95477 2261 aa2.25□□□□□ -2.05
TOPBP1-210ENST00000572787 DEFB131BA0A096LNP1 70 aa2.25□□□□□ -2.05
TOPBP1-210ENST00000572787 FXYD6P3P58550 94 aa2.24□□□□□ -2.05
TOPBP1-210ENST00000572787 H0YGX0 51 aa2.23□□□□□ -2.05
TOPBP1-210ENST00000572787 CACNA1GO43497 2377 aa2.23□□□□□ -2.05
TOPBP1-210ENST00000572787 OBSCNQ5VST9 7968 aa2.22□□□□□ -2.05
TOPBP1-210ENST00000572787 CRIPTQ9P021 101 aa2.21□□□□□ -2.06
TOPBP1-210ENST00000572787 KRTAP10-5P60370 271 aa2.2□□□□□ -2.06
TOPBP1-210ENST00000572787 SAMD9LQ8IVG5 1584 aa2.19□□□□□ -2.06
TOPBP1-210ENST00000572787 KRTAP9-6A8MVA2 160 aa2.19□□□□□ -2.06
TOPBP1-210ENST00000572787 USMG5Q96IX5 58 aa2.19□□□□□ -2.06
TOPBP1-210ENST00000572787 TOGARAM1Q9Y4F4 1720 aa2.19□□□□□ -2.06
TOPBP1-210ENST00000572787 K7EIL1 84 aa2.18□□□□□ -2.06
TOPBP1-210ENST00000572787 KRTAP13-3Q3SY46 172 aa2.18□□□□□ -2.06
TOPBP1-210ENST00000572787 TNCP24821 2201 aa2.18□□□□□ -2.06
TOPBP1-210ENST00000572787 ASCC3Q8N3C0 2202 aaKnown RBP2.18□□□□□ -2.06
TOPBP1-210ENST00000572787 DDX60Q8IY21 1712 aaKnown RBP2.17□□□□□ -2.06
TOPBP1-210ENST00000572787 TP53AIP1Q9HCN2 124 aa2.17□□□□□ -2.06
TOPBP1-210ENST00000572787 CACNA1BQ00975 2339 aa2.17□□□□□ -2.06
TOPBP1-210ENST00000572787 C4AP0C0L4 1744 aa2.17□□□□□ -2.06
TOPBP1-210ENST00000572787 KIF21BO75037 1637 aa2.17□□□□□ -2.06
TOPBP1-210ENST00000572787 CADP27708 2225 aa2.16□□□□□ -2.06
TOPBP1-210ENST00000572787 PIGYQ3MUY2 71 aa2.16□□□□□ -2.06
TOPBP1-210ENST00000572787 DEFB119Q8N690 84 aa2.16□□□□□ -2.06
TOPBP1-210ENST00000572787 TIMM8BQ9Y5J9 83 aaPredicted RBP2.16□□□□□ -2.06
TOPBP1-210ENST00000572787 ANKRD17O75179 2603 aaKnown RBP2.16□□□□□ -2.06
TOPBP1-210ENST00000572787 TNRC6CQ9HCJ0 1690 aaKnown RBP2.15□□□□□ -2.06
TOPBP1-210ENST00000572787 I3L2K1 104 aa2.15□□□□□ -2.07
TOPBP1-210ENST00000572787 SPINK4O60575 86 aa2.15□□□□□ -2.07
TOPBP1-210ENST00000572787 CRIP1P50238 77 aa2.15□□□□□ -2.07
TOPBP1-210ENST00000572787 KRTAP12-1P59990 96 aa2.15□□□□□ -2.07
TOPBP1-210ENST00000572787 COX6B2Q6YFQ2 88 aa2.15□□□□□ -2.07
TOPBP1-210ENST00000572787 DEFB123Q8N688 67 aa2.15□□□□□ -2.07
TOPBP1-210ENST00000572787 BAHCC1Q9P281 2608 aa2.15□□□□□ -2.07
TOPBP1-210ENST00000572787 TECTAO75443 2155 aa2.15□□□□□ -2.07
TOPBP1-210ENST00000572787 LYNX1P0DP58 116 aa2.14□□□□□ -2.07
TOPBP1-210ENST00000572787 SNRPGP62308 76 aaKnown RBP2.14□□□□□ -2.07
TOPBP1-210ENST00000572787 KRTAP4-3Q9BYR4 195 aa2.14□□□□□ -2.07
TOPBP1-210ENST00000572787 IQGAP1P46940 1657 aa2.13□□□□□ -2.07
TOPBP1-210ENST00000572787 K7EQZ3 153 aa2.13□□□□□ -2.07
TOPBP1-210ENST00000572787 NDUFA3O95167 84 aa2.13□□□□□ -2.07
TOPBP1-210ENST00000572787 MRPL34Q9BQ48 92 aaKnown RBP2.13□□□□□ -2.07
TOPBP1-210ENST00000572787 CDKN2A-AS1Q9UH64 79 aa2.13□□□□□ -2.07
TOPBP1-210ENST00000572787 CCL22O00626 93 aa2.12□□□□□ -2.07
TOPBP1-210ENST00000572787 LINC00158P58513 81 aa2.12□□□□□ -2.07
TOPBP1-210ENST00000572787 Q8IZM0 81 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms