RNA–Protein interactions for RNA: ENST00000568108.1

PTPN9-205, Transcript of protein tyrosine phosphatase, non-receptor type 9, human

TSL 2

Gene PTPN9, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN9-205	ENST00000568108		A0A1B0GUV1	79 aa		4.26	□□□□□ -1.73
PTPN9-205	ENST00000568108	SMIM1	B2RUZ4	78 aa		4.26	□□□□□ -1.73
PTPN9-205	ENST00000568108		H3BMG7	143 aa		4.26	□□□□□ -1.73
PTPN9-205	ENST00000568108	GAGE6	Q13070	117 aa		4.26	□□□□□ -1.73
PTPN9-205	ENST00000568108	SS18	Q15532	418 aa		4.26	□□□□□ -1.73
PTPN9-205	ENST00000568108	ATXN8	Q156A1	80 aa		4.26	□□□□□ -1.73
PTPN9-205	ENST00000568108	MEIG1	Q5JSS6	88 aa		4.26	□□□□□ -1.73
PTPN9-205	ENST00000568108	WFDC10B	Q8IUB3	73 aa		4.26	□□□□□ -1.73
PTPN9-205	ENST00000568108	LINC01561	Q8N1V8	128 aa		4.26	□□□□□ -1.73
PTPN9-205	ENST00000568108	TRBV30	A0A0K0K1B3	111 aa		4.25	□□□□□ -1.73
PTPN9-205	ENST00000568108	LOC100131303	A0A0U1RQF7	123 aa		4.25	□□□□□ -1.73
PTPN9-205	ENST00000568108		M0QXV9	152 aa		4.25	□□□□□ -1.73
PTPN9-205	ENST00000568108	PSCA	O43653	123 aa		4.25	□□□□□ -1.73
PTPN9-205	ENST00000568108	IGHV3-33	P01772	117 aa		4.25	□□□□□ -1.73
PTPN9-205	ENST00000568108	COX7B2	Q8TF08	81 aa		4.25	□□□□□ -1.73
PTPN9-205	ENST00000568108	NTN5	Q8WTR8	489 aa	Predicted RBP	4.25	□□□□□ -1.73
PTPN9-205	ENST00000568108	LITAF	Q99732	161 aa		4.25	□□□□□ -1.73
PTPN9-205	ENST00000568108	MYCBP2	O75592	4640 aa		4.25	□□□□□ -1.73
PTPN9-205	ENST00000568108	LRCOL1	A6NCL2	159 aa		4.24	□□□□□ -1.73
PTPN9-205	ENST00000568108	TMEM262	E9PQX1	116 aa		4.24	□□□□□ -1.73
PTPN9-205	ENST00000568108	RBX1	P62877	108 aa		4.24	□□□□□ -1.73
PTPN9-205	ENST00000568108	COX6A2	Q02221	97 aa		4.24	□□□□□ -1.73
PTPN9-205	ENST00000568108		A0A087WZ39	114 aa		4.23	□□□□□ -1.73
PTPN9-205	ENST00000568108		H7C2G1	150 aa		4.23	□□□□□ -1.73
PTPN9-205	ENST00000568108	TCL1B	O95988	128 aa		4.23	□□□□□ -1.73
PTPN9-205	ENST00000568108	CXCL5	P42830	114 aa		4.23	□□□□□ -1.73
PTPN9-205	ENST00000568108		Q8N814	137 aa		4.23	□□□□□ -1.73
PTPN9-205	ENST00000568108	LINC00308	Q8TCZ7	52 aa		4.23	□□□□□ -1.73
PTPN9-205	ENST00000568108	ZNF625	Q96I27	306 aa	Predicted RBP	4.23	□□□□□ -1.73
PTPN9-205	ENST00000568108	TRAV13-2	A0A0B4J235	113 aa		4.22	□□□□□ -1.73
PTPN9-205	ENST00000568108	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.22	□□□□□ -1.73
PTPN9-205	ENST00000568108	IGKV3OR2-268	A0A0C4DH90	116 aa		4.22	□□□□□ -1.73
PTPN9-205	ENST00000568108	LINC00959	A0A1B0GUT2	108 aa		4.22	□□□□□ -1.73
PTPN9-205	ENST00000568108	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.22	□□□□□ -1.73
PTPN9-205	ENST00000568108	IBA57-AS1	B1ANH7	110 aa		4.22	□□□□□ -1.73
PTPN9-205	ENST00000568108	RPL13A	P40429	203 aa	Known RBP	4.22	□□□□□ -1.73
PTPN9-205	ENST00000568108	WFDC2	Q14508	124 aa		4.22	□□□□□ -1.73
PTPN9-205	ENST00000568108	LINC01556	Q5JQF7	62 aa		4.22	□□□□□ -1.73
PTPN9-205	ENST00000568108	ADAMTSL4-AS1	Q5T5F5	129 aa		4.22	□□□□□ -1.73
PTPN9-205	ENST00000568108	TEN1	Q86WV5	123 aa		4.22	□□□□□ -1.73
PTPN9-205	ENST00000568108	PPDPFL	Q8WWR9	84 aa		4.22	□□□□□ -1.73
PTPN9-205	ENST00000568108		Q9HAA7	133 aa		4.22	□□□□□ -1.73
PTPN9-205	ENST00000568108	PRO0461	Q9UI25	63 aa		4.22	□□□□□ -1.73
PTPN9-205	ENST00000568108	IGLV4-60	A0A075B6I1	120 aa		4.21	□□□□□ -1.74
PTPN9-205	ENST00000568108	SLC25A20	O43772	301 aa		4.21	□□□□□ -1.74
PTPN9-205	ENST00000568108	CRP	P02741	224 aa		4.21	□□□□□ -1.74
PTPN9-205	ENST00000568108	ETDB	Q3ZM63	59 aa		4.21	□□□□□ -1.74
PTPN9-205	ENST00000568108	LELP1	Q5T871	98 aa		4.21	□□□□□ -1.74
PTPN9-205	ENST00000568108	SERTAD4-AS1	Q5TG53	156 aa		4.21	□□□□□ -1.74
PTPN9-205	ENST00000568108		Q8IZM0	81 aa		4.21	□□□□□ -1.74
PTPN9-205	ENST00000568108	TOMM7	Q9P0U1	55 aa		4.21	□□□□□ -1.74
PTPN9-205	ENST00000568108	TRBV10-2	A0A0K0K1G8	114 aa		4.2	□□□□□ -1.74
PTPN9-205	ENST00000568108		C9JAW5	83 aa		4.2	□□□□□ -1.74
PTPN9-205	ENST00000568108		H3BT86	120 aa		4.2	□□□□□ -1.74
PTPN9-205	ENST00000568108	COX7A2L	O14548	114 aa		4.2	□□□□□ -1.74
PTPN9-205	ENST00000568108	TRIAP1	O43715	76 aa		4.2	□□□□□ -1.74
PTPN9-205	ENST00000568108	LINC00158	P58513	81 aa		4.2	□□□□□ -1.74
PTPN9-205	ENST00000568108	CKS1B	P61024	79 aa		4.2	□□□□□ -1.74
PTPN9-205	ENST00000568108	NPC2	P61916	151 aa		4.2	□□□□□ -1.74
PTPN9-205	ENST00000568108	LINC01620	Q4KN68	170 aa		4.2	□□□□□ -1.74
PTPN9-205	ENST00000568108	C6orf226	Q5I0X4	101 aa		4.2	□□□□□ -1.74
PTPN9-205	ENST00000568108	CD164L2	Q6UWJ8	174 aa		4.2	□□□□□ -1.74
PTPN9-205	ENST00000568108	LINC01600	Q96MT4	127 aa		4.2	□□□□□ -1.74
PTPN9-205	ENST00000568108	VPS13B	Q7Z7G8	4022 aa		4.2	□□□□□ -1.74
PTPN9-205	ENST00000568108	ANG	P03950	147 aa	Known RBP	4.19	□□□□□ -1.74
PTPN9-205	ENST00000568108	XCL1	P47992	114 aa		4.19	□□□□□ -1.74
PTPN9-205	ENST00000568108	REG3A	Q06141	175 aa		4.19	□□□□□ -1.74
PTPN9-205	ENST00000568108	FOXI1	Q12951	378 aa		4.19	□□□□□ -1.74
PTPN9-205	ENST00000568108	COX17	Q14061	63 aa		4.19	□□□□□ -1.74
PTPN9-205	ENST00000568108		Q6ZSA8	131 aa		4.19	□□□□□ -1.74
PTPN9-205	ENST00000568108	ANKRD29	Q8N6D5	301 aa		4.19	□□□□□ -1.74
PTPN9-205	ENST00000568108	CARD19	Q96LW7	228 aa		4.19	□□□□□ -1.74
PTPN9-205	ENST00000568108	SND1-IT1	Q9HBX3	110 aa		4.19	□□□□□ -1.74
PTPN9-205	ENST00000568108	LST1	O00453	97 aa		4.18	□□□□□ -1.74
PTPN9-205	ENST00000568108	LECT2	O14960	151 aa		4.18	□□□□□ -1.74
PTPN9-205	ENST00000568108	SCGB1A1	P11684	91 aa		4.18	□□□□□ -1.74
PTPN9-205	ENST00000568108	C5orf38	Q86SI9	138 aa		4.18	□□□□□ -1.74
PTPN9-205	ENST00000568108	MIR7-3HG	Q8N6C7	128 aa		4.18	□□□□□ -1.74
PTPN9-205	ENST00000568108	DAND5	Q8N907	189 aa		4.18	□□□□□ -1.74
PTPN9-205	ENST00000568108	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	4.17	□□□□□ -1.74
PTPN9-205	ENST00000568108	TRAV8-4	A0A0B4J246	113 aa		4.17	□□□□□ -1.74
PTPN9-205	ENST00000568108		A0A0U1RRA0	63 aa		4.17	□□□□□ -1.74
PTPN9-205	ENST00000568108	GAGE12H	A6NDE8	117 aa		4.17	□□□□□ -1.74
PTPN9-205	ENST00000568108	SNCG	O76070	127 aa		4.17	□□□□□ -1.74
PTPN9-205	ENST00000568108	TRAC	P01848	142 aa		4.17	□□□□□ -1.74
PTPN9-205	ENST00000568108	PCP4	P48539	62 aa		4.17	□□□□□ -1.74
PTPN9-205	ENST00000568108	C2orf82	Q6UX34	121 aa		4.17	□□□□□ -1.74
PTPN9-205	ENST00000568108	LINC00269	Q8N2A0	174 aa		4.17	□□□□□ -1.74
PTPN9-205	ENST00000568108	MTURN	Q8N3F0	131 aa		4.17	□□□□□ -1.74
PTPN9-205	ENST00000568108	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.17	□□□□□ -1.74
PTPN9-205	ENST00000568108	UBE2W	Q96B02	151 aa		4.17	□□□□□ -1.74
PTPN9-205	ENST00000568108	SIGMAR1	Q99720	223 aa		4.17	□□□□□ -1.74
PTPN9-205	ENST00000568108		H0YGX0	51 aa		4.16	□□□□□ -1.74
PTPN9-205	ENST00000568108	OXT	P01178	125 aa		4.16	□□□□□ -1.74
PTPN9-205	ENST00000568108	RPL28	P46779	137 aa	Known RBP	4.16	□□□□□ -1.74
PTPN9-205	ENST00000568108	CLPSL2	Q6UWE3	100 aa		4.16	□□□□□ -1.74
PTPN9-205	ENST00000568108	SOSTDC1	Q6X4U4	206 aa		4.16	□□□□□ -1.74
PTPN9-205	ENST00000568108	SCX	Q7RTU7	201 aa		4.16	□□□□□ -1.74
PTPN9-205	ENST00000568108		Q8N3U1	123 aa		4.16	□□□□□ -1.74
PTPN9-205	ENST00000568108	NDUFC2	O95298	119 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms