RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 C9orf66Q5T8R8 295 aa8.86□□□□□ -0.99
COMMD4-209ENST00000564068 V9GYY9 64 aa8.85□□□□□ -0.99
COMMD4-209ENST00000564068 UNC79Q9P2D8 2635 aa8.85□□□□□ -0.99
COMMD4-209ENST00000564068 KLK9Q2XQG4 91 aa8.84□□□□□ -0.99
COMMD4-209ENST00000564068 Q8N9L7 120 aa8.84□□□□□ -0.99
COMMD4-209ENST00000564068 SPTSSBQ8NFR3 76 aa8.84□□□□□ -0.99
COMMD4-209ENST00000564068 FAM30AQ9NZY2 134 aa8.84□□□□□ -0.99
COMMD4-209ENST00000564068 LYRM9A8MSI8 78 aa8.84□□□□□ -0.99
COMMD4-209ENST00000564068 LINC00575Q6W349 94 aa8.83□□□□□ -1
COMMD4-209ENST00000564068 C1orf195Q5TG92 126 aa8.83□□□□□ -1
COMMD4-209ENST00000564068 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.83□□□□□ -1
COMMD4-209ENST00000564068 NDUFS5O43920 106 aa8.82□□□□□ -1
COMMD4-209ENST00000564068 UBE2DNLQ8IWF7 75 aa8.82□□□□□ -1
COMMD4-209ENST00000564068 LINC01561Q8N1V8 128 aa8.82□□□□□ -1
COMMD4-209ENST00000564068 ATP5EP56381 51 aaPredicted RBP8.81□□□□□ -1
COMMD4-209ENST00000564068 TACC2O95359 2948 aa8.81□□□□□ -1
COMMD4-209ENST00000564068 A0A096LNI7 61 aa8.81□□□□□ -1
COMMD4-209ENST00000564068 TMEM254Q8TBM7 123 aa8.81□□□□□ -1
COMMD4-209ENST00000564068 MUC7Q8TAX7 377 aa8.8□□□□□ -1
COMMD4-209ENST00000564068 HIGD2AQ9BW72 106 aa8.8□□□□□ -1
COMMD4-209ENST00000564068 ATMQ13315 3056 aa8.8□□□□□ -1
COMMD4-209ENST00000564068 STAB1Q9NY15 2570 aa8.8□□□□□ -1
COMMD4-209ENST00000564068 COL12A1Q99715 3063 aa8.8□□□□□ -1
COMMD4-209ENST00000564068 TRBV7-6A0A0J9YX20 115 aa8.79□□□□□ -1
COMMD4-209ENST00000564068 C9orf129Q5T035 196 aaKnown RBP8.79□□□□□ -1
COMMD4-209ENST00000564068 WFDC10BQ8IUB3 73 aa8.79□□□□□ -1
COMMD4-209ENST00000564068 WFDC13Q8IUB5 93 aa8.79□□□□□ -1
COMMD4-209ENST00000564068 M0R378 163 aa8.79□□□□□ -1
COMMD4-209ENST00000564068 ZZEF1O43149 2961 aa8.79□□□□□ -1
COMMD4-209ENST00000564068 NANOS2P60321 138 aaKnown RBP8.79□□□□□ -1
COMMD4-209ENST00000564068 RPL37AP8A6NKH3 93 aa8.78□□□□□ -1
COMMD4-209ENST00000564068 LOC400499M0QZD8 3231 aa8.78□□□□□ -1
COMMD4-209ENST00000564068 IGKV2-24A0A0C4DH68 120 aa8.78□□□□□ -1
COMMD4-209ENST00000564068 SYCNQ0VAF6 134 aa8.77□□□□□ -1.01
COMMD4-209ENST00000564068 TRAV10A0A0B4J240 114 aa8.77□□□□□ -1.01
COMMD4-209ENST00000564068 A0A1B0GUV1 79 aa8.76□□□□□ -1.01
COMMD4-209ENST00000564068 PRYO14603 147 aa8.76□□□□□ -1.01
COMMD4-209ENST00000564068 LELP1Q5T871 98 aa8.76□□□□□ -1.01
COMMD4-209ENST00000564068 PRO0628Q9UI54 55 aa8.76□□□□□ -1.01
COMMD4-209ENST00000564068 H0Y9J4 135 aa8.76□□□□□ -1.01
COMMD4-209ENST00000564068 IGLV1-51P01701 117 aa8.75□□□□□ -1.01
COMMD4-209ENST00000564068 DMDP11532 3685 aa8.75□□□□□ -1.01
COMMD4-209ENST00000564068 SPATA3Q8NHX4 192 aa8.75□□□□□ -1.01
COMMD4-209ENST00000564068 PSPHP1O15172 72 aa8.74□□□□□ -1.01
COMMD4-209ENST00000564068 A0A0J9YWU9 116 aa8.73□□□□□ -1.01
COMMD4-209ENST00000564068 COL6A5A8TX70 2615 aa8.73□□□□□ -1.01
COMMD4-209ENST00000564068 C10orf25Q5T742 122 aa8.73□□□□□ -1.01
COMMD4-209ENST00000564068 NDUFB1O75438 58 aa8.73□□□□□ -1.01
COMMD4-209ENST00000564068 TM2D3Q9BRN9 247 aa8.73□□□□□ -1.01
COMMD4-209ENST00000564068 Q6ZQT0 140 aa8.72□□□□□ -1.01
COMMD4-209ENST00000564068 KPRPQ5T749 579 aaPredicted RBP8.71□□□□□ -1.02
COMMD4-209ENST00000564068 CXCL6P80162 114 aa8.71□□□□□ -1.02
COMMD4-209ENST00000564068 C1orf137Q5JT78 98 aa8.7□□□□□ -1.02
COMMD4-209ENST00000564068 C2orf48Q96LS8 159 aa8.69□□□□□ -1.02
COMMD4-209ENST00000564068 ESRGQ1W209 222 aa8.69□□□□□ -1.02
COMMD4-209ENST00000564068 ITPR2Q14571 2701 aa8.68□□□□□ -1.02
COMMD4-209ENST00000564068 TEX15Q9BXT5 2789 aa8.68□□□□□ -1.02
COMMD4-209ENST00000564068 EGFEM1PQ0D2K5 195 aa8.68□□□□□ -1.02
COMMD4-209ENST00000564068 UBE2AP49459 152 aa8.68□□□□□ -1.02
COMMD4-209ENST00000564068 LINC00208Q96KT6 92 aa8.68□□□□□ -1.02
COMMD4-209ENST00000564068 CHKB-CPT1BH3BT56 60 aa8.67□□□□□ -1.02
COMMD4-209ENST00000564068 DEFB116Q30KQ4 102 aa8.67□□□□□ -1.02
COMMD4-209ENST00000564068 DEFB131BA0A096LNP1 70 aa8.67□□□□□ -1.02
COMMD4-209ENST00000564068 FAM104AQ969W3 186 aa8.67□□□□□ -1.02
COMMD4-209ENST00000564068 DHRS4-AS1Q9P1J3 65 aa8.67□□□□□ -1.02
COMMD4-209ENST00000564068 MRPL55Q7Z7F7 128 aaKnown RBP8.66□□□□□ -1.02
COMMD4-209ENST00000564068 LINC01600Q96MT4 127 aa8.66□□□□□ -1.02
COMMD4-209ENST00000564068 LINC00474Q9P2X8 69 aa8.65□□□□□ -1.02
COMMD4-209ENST00000564068 C11orf45Q8TAV5 145 aa8.65□□□□□ -1.02
COMMD4-209ENST00000564068 PMAIP1Q13794 54 aa8.65□□□□□ -1.02
COMMD4-209ENST00000564068 LINC00336Q6ZUF6 198 aa8.65□□□□□ -1.03
COMMD4-209ENST00000564068 A6NED7 52 aa8.64□□□□□ -1.03
COMMD4-209ENST00000564068 Q6ZRU5 148 aa8.64□□□□□ -1.03
COMMD4-209ENST00000564068 IGKV4-1P06312 121 aa8.63□□□□□ -1.03
COMMD4-209ENST00000564068 SMIM29Q86T20 159 aa8.63□□□□□ -1.03
COMMD4-209ENST00000564068 LRBAP50851 2863 aa8.63□□□□□ -1.03
COMMD4-209ENST00000564068 UBR5O95071 2799 aaPredicted RBP8.63□□□□□ -1.03
COMMD4-209ENST00000564068 ITPR1Q14643 2758 aa8.62□□□□□ -1.03
COMMD4-209ENST00000564068 BCE1O60756 84 aa8.62□□□□□ -1.03
COMMD4-209ENST00000564068 CYSTM1Q9H1C7 97 aa8.62□□□□□ -1.03
COMMD4-209ENST00000564068 LOC110117498A0A087WWA1 95 aa8.62□□□□□ -1.03
COMMD4-209ENST00000564068 C6orf48Q9UBA6 75 aa8.62□□□□□ -1.03
COMMD4-209ENST00000564068 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.61□□□□□ -1.03
COMMD4-209ENST00000564068 NBEAL1Q6ZS30 2694 aa8.61□□□□□ -1.03
COMMD4-209ENST00000564068 H7BZZ5 65 aa8.6□□□□□ -1.03
COMMD4-209ENST00000564068 KIAA0087Q14695 138 aa8.6□□□□□ -1.03
COMMD4-209ENST00000564068 IGHV4-30-4P0DP06 118 aa8.6□□□□□ -1.03
COMMD4-209ENST00000564068 RETNQ9HD89 108 aa8.59□□□□□ -1.03
COMMD4-209ENST00000564068 NBEAL2Q6ZNJ1 2754 aa8.58□□□□□ -1.04
COMMD4-209ENST00000564068 LYPD5Q6UWN5 251 aa8.58□□□□□ -1.04
COMMD4-209ENST00000564068 A0A087WSZ3 146 aa8.58□□□□□ -1.04
COMMD4-209ENST00000564068 M0R2N4 97 aa8.58□□□□□ -1.04
COMMD4-209ENST00000564068 OXLD1Q5BKU9 147 aa8.57□□□□□ -1.04
COMMD4-209ENST00000564068 PRR15LQ9BU68 103 aa8.57□□□□□ -1.04
COMMD4-209ENST00000564068 ASPMQ8IZT6 3477 aa8.56□□□□□ -1.04
COMMD4-209ENST00000564068 KLKP1Q107X0 134 aa8.56□□□□□ -1.04
COMMD4-209ENST00000564068 Q6ZTC4 211 aa8.56□□□□□ -1.04
COMMD4-209ENST00000564068 DCHS1Q96JQ0 3298 aa8.55□□□□□ -1.04
COMMD4-209ENST00000564068 ASH1LQ9NR48 2969 aaKnown RBP8.55□□□□□ -1.04
COMMD4-209ENST00000564068 ELOF1P60002 83 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms