RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 Q9BRP9 147 aa3.55□□□□□ -1.84
CAPN3-211ENST00000562199 PRUNE2Q8WUY3 3088 aa3.55□□□□□ -1.84
CAPN3-211ENST00000562199 ZDBF2Q9HCK1 2354 aa3.55□□□□□ -1.84
CAPN3-211ENST00000562199 WDR87Q6ZQQ6 2873 aa3.55□□□□□ -1.84
CAPN3-211ENST00000562199 ICE1Q9Y2F5 2266 aa3.55□□□□□ -1.84
CAPN3-211ENST00000562199 ABCA1O95477 2261 aa3.54□□□□□ -1.84
CAPN3-211ENST00000562199 IGKV3-7A0A075B6H7 116 aa3.54□□□□□ -1.84
CAPN3-211ENST00000562199 TRAV10A0A0B4J240 114 aa3.54□□□□□ -1.84
CAPN3-211ENST00000562199 A0A1W2PNM2 257 aa3.54□□□□□ -1.84
CAPN3-211ENST00000562199 Q6ZR54 194 aa3.54□□□□□ -1.84
CAPN3-211ENST00000562199 ORMDL1Q9P0S3 153 aa3.54□□□□□ -1.84
CAPN3-211ENST00000562199 A0A1W2PPR1 153 aa3.53□□□□□ -1.84
CAPN3-211ENST00000562199 LRCOL1A6NCL2 159 aa3.53□□□□□ -1.84
CAPN3-211ENST00000562199 A8MTW9 85 aa3.53□□□□□ -1.84
CAPN3-211ENST00000562199 INSP01308 110 aa3.53□□□□□ -1.84
CAPN3-211ENST00000562199 DEFB113Q30KQ7 82 aa3.53□□□□□ -1.84
CAPN3-211ENST00000562199 LINC00483Q53H64 154 aa3.53□□□□□ -1.84
CAPN3-211ENST00000562199 ENHOQ6UWT2 76 aa3.53□□□□□ -1.84
CAPN3-211ENST00000562199 SMIM29Q86T20 159 aa3.53□□□□□ -1.84
CAPN3-211ENST00000562199 TRIOBPQ9H2D6 2365 aa3.53□□□□□ -1.84
CAPN3-211ENST00000562199 URB1O60287 2271 aaKnown RBP3.53□□□□□ -1.85
CAPN3-211ENST00000562199 PKDREJQ9NTG1 2253 aa3.53□□□□□ -1.85
CAPN3-211ENST00000562199 TRBV10-1A0A0K0K1A3 114 aa3.52□□□□□ -1.85
CAPN3-211ENST00000562199 H3BUX3 64 aa3.52□□□□□ -1.85
CAPN3-211ENST00000562199 SPINK13Q1W4C9 94 aa3.52□□□□□ -1.85
CAPN3-211ENST00000562199 LINC00308Q8TCZ7 52 aa3.52□□□□□ -1.85
CAPN3-211ENST00000562199 COL6A3P12111 3177 aa3.52□□□□□ -1.85
CAPN3-211ENST00000562199 ARHGAP32A7KAX9 2087 aa3.51□□□□□ -1.85
CAPN3-211ENST00000562199 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.51□□□□□ -1.85
CAPN3-211ENST00000562199 IGKV2-29A2NJV5 120 aaPredicted RBP3.51□□□□□ -1.85
CAPN3-211ENST00000562199 LY6EQ16553 131 aa3.51□□□□□ -1.85
CAPN3-211ENST00000562199 HIGD2BQ4VC39 106 aa3.51□□□□□ -1.85
CAPN3-211ENST00000562199 KPRPQ5T749 579 aaPredicted RBP3.51□□□□□ -1.85
CAPN3-211ENST00000562199 BRD3OSQ6XYD6 125 aa3.51□□□□□ -1.85
CAPN3-211ENST00000562199 LINC00167Q96N53 147 aa3.51□□□□□ -1.85
CAPN3-211ENST00000562199 UBL5Q9BZL1 73 aa3.51□□□□□ -1.85
CAPN3-211ENST00000562199 PLAC8Q9NZF1 115 aa3.51□□□□□ -1.85
CAPN3-211ENST00000562199 CDKN2A-AS1Q9UH64 79 aa3.51□□□□□ -1.85
CAPN3-211ENST00000562199 FRYQ5TBA9 3013 aa3.5□□□□□ -1.85
CAPN3-211ENST00000562199 VPS13AQ96RL7 3174 aa3.5□□□□□ -1.85
CAPN3-211ENST00000562199 DMDP11532 3685 aa3.5□□□□□ -1.85
CAPN3-211ENST00000562199 PANO1I0J062 215 aa3.5□□□□□ -1.85
CAPN3-211ENST00000562199 IGKV3-20P01619 116 aa3.5□□□□□ -1.85
CAPN3-211ENST00000562199 IGHV3-53P01767 116 aa3.5□□□□□ -1.85
CAPN3-211ENST00000562199 SPAG11BQ08648 103 aa3.5□□□□□ -1.85
CAPN3-211ENST00000562199 SPAG11AQ6PDA7 123 aa3.5□□□□□ -1.85
CAPN3-211ENST00000562199 LINC01558Q9Y6Z2 57 aa3.5□□□□□ -1.85
CAPN3-211ENST00000562199 CELSR3Q9NYQ7 3312 aa3.5□□□□□ -1.85
CAPN3-211ENST00000562199 NCOR1O75376 2440 aa3.49□□□□□ -1.85
CAPN3-211ENST00000562199 LCE6AA0A183 80 aa3.49□□□□□ -1.85
CAPN3-211ENST00000562199 KRTAP26-1Q6PEX3 210 aa3.49□□□□□ -1.85
CAPN3-211ENST00000562199 ZNF625Q96I27 306 aaPredicted RBP3.49□□□□□ -1.85
CAPN3-211ENST00000562199 NBEAQ8NFP9 2946 aa3.49□□□□□ -1.85
CAPN3-211ENST00000562199 ZZEF1O43149 2961 aa3.48□□□□□ -1.85
CAPN3-211ENST00000562199 NDUFB1O75438 58 aa3.48□□□□□ -1.85
CAPN3-211ENST00000562199 CNBPP62633 177 aaKnown RBP3.48□□□□□ -1.85
CAPN3-211ENST00000562199 C1orf137Q5JT78 98 aa3.48□□□□□ -1.85
CAPN3-211ENST00000562199 PRR34Q9NV39 138 aa3.48□□□□□ -1.85
CAPN3-211ENST00000562199 OTOGLQ3ZCN5 2332 aa3.48□□□□□ -1.85
CAPN3-211ENST00000562199 APC2O95996 2303 aa3.47□□□□□ -1.85
CAPN3-211ENST00000562199 ROS1P08922 2347 aa3.47□□□□□ -1.85
CAPN3-211ENST00000562199 H3BQ85 93 aa3.47□□□□□ -1.85
CAPN3-211ENST00000562199 KRTAP10-7P60409 375 aaPredicted RBP3.47□□□□□ -1.85
CAPN3-211ENST00000562199 COX6A2Q02221 97 aa3.47□□□□□ -1.85
CAPN3-211ENST00000562199 ZCCHC13Q8WW36 166 aaKnown RBP3.47□□□□□ -1.85
CAPN3-211ENST00000562199 BSNQ9UPA5 3926 aa3.47□□□□□ -1.85
CAPN3-211ENST00000562199 NDUFAF8A1L188 74 aa3.46□□□□□ -1.86
CAPN3-211ENST00000562199 DEFB131AP59861 70 aa3.46□□□□□ -1.86
CAPN3-211ENST00000562199 KRTAP25-1Q3LHN0 102 aa3.46□□□□□ -1.86
CAPN3-211ENST00000562199 CFAP47Q6ZTR5 3102 aa3.45□□□□□ -1.86
CAPN3-211ENST00000562199 H0YGX0 51 aa3.45□□□□□ -1.86
CAPN3-211ENST00000562199 C10orf99Q6UWK7 81 aa3.45□□□□□ -1.86
CAPN3-211ENST00000562199 SPANXA2-OT1Q8N9U9 137 aa3.45□□□□□ -1.86
CAPN3-211ENST00000562199 WFDC9Q8NEX5 89 aa3.45□□□□□ -1.86
CAPN3-211ENST00000562199 COX7B2Q8TF08 81 aa3.45□□□□□ -1.86
CAPN3-211ENST00000562199 DMAC1Q96GE9 116 aa3.45□□□□□ -1.86
CAPN3-211ENST00000562199 LINC00208Q96KT6 92 aa3.45□□□□□ -1.86
CAPN3-211ENST00000562199 KRTAP2-2Q9BYT5 123 aa3.45□□□□□ -1.86
CAPN3-211ENST00000562199 ZFHX4Q86UP3 3567 aa3.45□□□□□ -1.86
CAPN3-211ENST00000562199 PRRC2AP48634 2157 aaKnown RBP3.45□□□□□ -1.86
CAPN3-211ENST00000562199 ZNF318Q5VUA4 2279 aa3.45□□□□□ -1.86
CAPN3-211ENST00000562199 DSPP15924 2871 aaKnown RBP3.45□□□□□ -1.86
CAPN3-211ENST00000562199 CR1P17927 2039 aa3.44□□□□□ -1.86
CAPN3-211ENST00000562199 ANKHD1Q8IWZ3 2542 aaKnown RBP3.44□□□□□ -1.86
CAPN3-211ENST00000562199 IGKV2-28A0A075B6P5 120 aa3.44□□□□□ -1.86
CAPN3-211ENST00000562199 A0A087WYN8 130 aa3.44□□□□□ -1.86
CAPN3-211ENST00000562199 JMJD7-PLA2G4BH0Y9G9 81 aa3.44□□□□□ -1.86
CAPN3-211ENST00000562199 IGKV2D-28P01615 120 aa3.44□□□□□ -1.86
CAPN3-211ENST00000562199 DEFB112Q30KQ8 113 aa3.44□□□□□ -1.86
CAPN3-211ENST00000562199 CCL19Q99731 98 aa3.44□□□□□ -1.86
CAPN3-211ENST00000562199 LOC400499M0QZD8 3231 aa3.43□□□□□ -1.86
CAPN3-211ENST00000562199 SMG1Q96Q15 3661 aaKnown RBP3.43□□□□□ -1.86
CAPN3-211ENST00000562199 IGLV7-46A0A075B6I9 117 aa3.43□□□□□ -1.86
CAPN3-211ENST00000562199 IGKV2D-30A0A075B6S6 120 aa3.43□□□□□ -1.86
CAPN3-211ENST00000562199 NUPR2A6NF83 97 aa3.43□□□□□ -1.86
CAPN3-211ENST00000562199 HTN1P15515 57 aa3.43□□□□□ -1.86
CAPN3-211ENST00000562199 SMIM11BQ8TCY0 68 aa3.43□□□□□ -1.86
CAPN3-211ENST00000562199 C16orf74Q96GX8 76 aa3.43□□□□□ -1.86
CAPN3-211ENST00000562199 HIGD2AQ9BW72 106 aa3.43□□□□□ -1.86
CAPN3-211ENST00000562199 ABCA4P78363 2273 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms