RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 Q6ZQT0 140 aa4.55□□□□□ -1.68
TSPAN3-209ENST00000560715 hDV103S1A0JD37 113 aa4.55□□□□□ -1.68
TSPAN3-209ENST00000560715 KTN1-AS1Q86SY8 53 aa4.55□□□□□ -1.68
TSPAN3-209ENST00000560715 C7orf33Q8WU49 177 aa4.55□□□□□ -1.68
TSPAN3-209ENST00000560715 LOC110117498A0A087WWA1 95 aa4.55□□□□□ -1.68
TSPAN3-209ENST00000560715 KRTAP4-16G5E9R7 235 aaPredicted RBP4.55□□□□□ -1.68
TSPAN3-209ENST00000560715 LY6G6DO95868 133 aa4.55□□□□□ -1.68
TSPAN3-209ENST00000560715 Q8N814 137 aa4.55□□□□□ -1.68
TSPAN3-209ENST00000560715 CCL18P55774 89 aa4.54□□□□□ -1.68
TSPAN3-209ENST00000560715 UBR5O95071 2799 aaPredicted RBP4.54□□□□□ -1.68
TSPAN3-209ENST00000560715 ZNF73O43830 326 aaPredicted RBP4.54□□□□□ -1.68
TSPAN3-209ENST00000560715 C5orf56Q8N8D9 126 aa4.54□□□□□ -1.68
TSPAN3-209ENST00000560715 ZFHX3Q15911 3703 aa4.54□□□□□ -1.68
TSPAN3-209ENST00000560715 WNK2Q9Y3S1 2297 aa4.53□□□□□ -1.68
TSPAN3-209ENST00000560715 VPS13CQ709C8 3753 aa4.53□□□□□ -1.68
TSPAN3-209ENST00000560715 BPY2O14599 106 aa4.53□□□□□ -1.68
TSPAN3-209ENST00000560715 C18orf65Q6ZTR6 163 aa4.53□□□□□ -1.68
TSPAN3-209ENST00000560715 IGHV3-73A0A0B4J1V6 119 aa4.53□□□□□ -1.68
TSPAN3-209ENST00000560715 LUZP6Q538Z0 58 aa4.53□□□□□ -1.68
TSPAN3-209ENST00000560715 MAST4O15021 2626 aa4.53□□□□□ -1.68
TSPAN3-209ENST00000560715 TRBV10-1A0A0K0K1A3 114 aa4.52□□□□□ -1.69
TSPAN3-209ENST00000560715 HECTD1Q9ULT8 2610 aa4.52□□□□□ -1.69
TSPAN3-209ENST00000560715 CSMD1Q96PZ7 3565 aa4.52□□□□□ -1.69
TSPAN3-209ENST00000560715 TRBV6-4A0A1B0GX49 114 aa4.52□□□□□ -1.69
TSPAN3-209ENST00000560715 G3V318 75 aa4.52□□□□□ -1.69
TSPAN3-209ENST00000560715 NDUFA4O00483 81 aa4.52□□□□□ -1.69
TSPAN3-209ENST00000560715 LINC00158P58513 81 aa4.52□□□□□ -1.69
TSPAN3-209ENST00000560715 LINC00588Q9Y4M8 146 aa4.52□□□□□ -1.69
TSPAN3-209ENST00000560715 TRAV22A0A0B4J277 110 aa4.51□□□□□ -1.69
TSPAN3-209ENST00000560715 A6NED7 52 aa4.51□□□□□ -1.69
TSPAN3-209ENST00000560715 MSMBP08118 114 aa4.51□□□□□ -1.69
TSPAN3-209ENST00000560715 IGKV3-7A0A075B6H7 116 aa4.51□□□□□ -1.69
TSPAN3-209ENST00000560715 B4DSR2 109 aa4.51□□□□□ -1.69
TSPAN3-209ENST00000560715 LINC01006Q8NI28 216 aa4.51□□□□□ -1.69
TSPAN3-209ENST00000560715 PTPN13Q12923 2485 aa4.51□□□□□ -1.69
TSPAN3-209ENST00000560715 ABCA2Q9BZC7 2435 aa4.51□□□□□ -1.69
TSPAN3-209ENST00000560715 SVEP1Q4LDE5 3571 aa4.51□□□□□ -1.69
TSPAN3-209ENST00000560715 M0R2N4 97 aa4.51□□□□□ -1.69
TSPAN3-209ENST00000560715 UBE2BP63146 152 aa4.51□□□□□ -1.69
TSPAN3-209ENST00000560715 BRD3OSQ6XYD6 125 aa4.51□□□□□ -1.69
TSPAN3-209ENST00000560715 IGLV7-46A0A075B6I9 117 aa4.5□□□□□ -1.69
TSPAN3-209ENST00000560715 A0A096LNT2 108 aa4.5□□□□□ -1.69
TSPAN3-209ENST00000560715 M0R378 163 aa4.5□□□□□ -1.69
TSPAN3-209ENST00000560715 PDE6GP18545 87 aa4.5□□□□□ -1.69
TSPAN3-209ENST00000560715 NTM-AS1Q6ZSK4 140 aa4.5□□□□□ -1.69
TSPAN3-209ENST00000560715 COX7B2Q8TF08 81 aa4.5□□□□□ -1.69
TSPAN3-209ENST00000560715 DOPEY2Q9Y3R5 2298 aa4.5□□□□□ -1.69
TSPAN3-209ENST00000560715 NAV2Q8IVL1 2488 aa4.5□□□□□ -1.69
TSPAN3-209ENST00000560715 A6NDX4 124 aa4.5□□□□□ -1.69
TSPAN3-209ENST00000560715 H3BUA1 57 aa4.5□□□□□ -1.69
TSPAN3-209ENST00000560715 LRCOL1A6NCL2 159 aa4.49□□□□□ -1.69
TSPAN3-209ENST00000560715 SYCNQ0VAF6 134 aa4.49□□□□□ -1.69
TSPAN3-209ENST00000560715 C1orf64Q8NEQ6 169 aa4.49□□□□□ -1.69
TSPAN3-209ENST00000560715 RHPN1-AS1Q9BWJ2 59 aa4.49□□□□□ -1.69
TSPAN3-209ENST00000560715 COL12A1Q99715 3063 aa4.49□□□□□ -1.69
TSPAN3-209ENST00000560715 H3BUX3 64 aa4.48□□□□□ -1.69
TSPAN3-209ENST00000560715 USMG5Q96IX5 58 aa4.48□□□□□ -1.69
TSPAN3-209ENST00000560715 HIGD2AQ9BW72 106 aa4.48□□□□□ -1.69
TSPAN3-209ENST00000560715 NANOS2P60321 138 aaKnown RBP4.48□□□□□ -1.69
TSPAN3-209ENST00000560715 Q8N377 158 aa4.48□□□□□ -1.69
TSPAN3-209ENST00000560715 MED13LQ71F56 2210 aa4.48□□□□□ -1.69
TSPAN3-209ENST00000560715 INSP01308 110 aa4.47□□□□□ -1.69
TSPAN3-209ENST00000560715 IGHV3-53P01767 116 aa4.47□□□□□ -1.69
TSPAN3-209ENST00000560715 LY6EQ16553 131 aa4.47□□□□□ -1.69
TSPAN3-209ENST00000560715 CDC42SE2Q9NRR3 84 aa4.47□□□□□ -1.69
TSPAN3-209ENST00000560715 NBPF19A0A087WUL8 3843 aa4.47□□□□□ -1.69
TSPAN3-209ENST00000560715 DOPEY1Q5JWR5 2465 aa4.47□□□□□ -1.69
TSPAN3-209ENST00000560715 A8MU10 97 aa4.47□□□□□ -1.69
TSPAN3-209ENST00000560715 IGKV3-20P01619 116 aa4.47□□□□□ -1.69
TSPAN3-209ENST00000560715 SPINK13Q1W4C9 94 aa4.47□□□□□ -1.69
TSPAN3-209ENST00000560715 SCXQ7RTU7 201 aa4.47□□□□□ -1.69
TSPAN3-209ENST00000560715 FLNCQ14315 2725 aa4.47□□□□□ -1.69
TSPAN3-209ENST00000560715 PHF5AQ7RTV0 110 aaKnown RBP4.47□□□□□ -1.69
TSPAN3-209ENST00000560715 AKAP6Q13023 2319 aa4.47□□□□□ -1.69
TSPAN3-209ENST00000560715 UBE2L6O14933 153 aa4.46□□□□□ -1.7
TSPAN3-209ENST00000560715 TOMM7Q9P0U1 55 aa4.46□□□□□ -1.7
TSPAN3-209ENST00000560715 TLX1NBP0CAT3 122 aa4.46□□□□□ -1.7
TSPAN3-209ENST00000560715 PSCAO43653 123 aa4.45□□□□□ -1.7
TSPAN3-209ENST00000560715 UBE2AP49459 152 aa4.45□□□□□ -1.7
TSPAN3-209ENST00000560715 CASC10Q5T4H9 136 aa4.45□□□□□ -1.7
TSPAN3-209ENST00000560715 LINC00575Q6W349 94 aa4.45□□□□□ -1.7
TSPAN3-209ENST00000560715 LINC00269Q8N2A0 174 aa4.45□□□□□ -1.7
TSPAN3-209ENST00000560715 CAMK2N2Q96S95 79 aa4.45□□□□□ -1.7
TSPAN3-209ENST00000560715 Q5VV11 94 aa4.45□□□□□ -1.7
TSPAN3-209ENST00000560715 MUC7Q8TAX7 377 aa4.45□□□□□ -1.7
TSPAN3-209ENST00000560715 C16orf90A8MZG2 172 aa4.44□□□□□ -1.7
TSPAN3-209ENST00000560715 IGKV4-1P06312 121 aa4.44□□□□□ -1.7
TSPAN3-209ENST00000560715 DEFB112Q30KQ8 113 aa4.44□□□□□ -1.7
TSPAN3-209ENST00000560715 ATP11AUNQ6ZP68 121 aa4.44□□□□□ -1.7
TSPAN3-209ENST00000560715 LCA10Q71F78 164 aa4.44□□□□□ -1.7
TSPAN3-209ENST00000560715 CIRBP-AS1Q8TBR5 109 aa4.44□□□□□ -1.7
TSPAN3-209ENST00000560715 CR1P17927 2039 aa4.44□□□□□ -1.7
TSPAN3-209ENST00000560715 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.44□□□□□ -1.73e-6■■■□□ 16.3
TSPAN3-209ENST00000560715 LCE6AA0A183 80 aa4.44□□□□□ -1.7
TSPAN3-209ENST00000560715 H3BQ85 93 aa4.44□□□□□ -1.7
TSPAN3-209ENST00000560715 DEFB113Q30KQ7 82 aa4.44□□□□□ -1.7
TSPAN3-209ENST00000560715 CYP4F30PQ9H0H9 118 aa4.44□□□□□ -1.7
TSPAN3-209ENST00000560715 LRRK2Q5S007 2527 aa4.44□□□□□ -1.7
TSPAN3-209ENST00000560715 USP9YO00507 2555 aaPredicted RBP4.44□□□□□ -1.7
TSPAN3-209ENST00000560715 PRM2P04554 102 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms