RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 DEFB109BQ30KR1 87 aa0.32□□□□□ -2.36
GPHN-216ENST00000557678 LINC00643Q86TS7 51 aa0.32□□□□□ -2.36
GPHN-216ENST00000557678 TMEM131LA2VDJ0 1609 aa0.31□□□□□ -2.36
GPHN-216ENST00000557678 UBR3Q6ZT12 1888 aa0.31□□□□□ -2.36
GPHN-216ENST00000557678 ATP7BP35670 1465 aa0.31□□□□□ -2.36
GPHN-216ENST00000557678 ATRQ13535 2644 aa0.31□□□□□ -2.36
GPHN-216ENST00000557678 TIAM2Q8IVF5 1701 aa0.31□□□□□ -2.36
GPHN-216ENST00000557678 SPTA1P02549 2419 aa0.31□□□□□ -2.36
GPHN-216ENST00000557678 A0A1B0GUT8 65 aa0.31□□□□□ -2.36
GPHN-216ENST00000557678 RPL38P63173 70 aaKnown RBP0.31□□□□□ -2.36
GPHN-216ENST00000557678 CRIPTQ9P021 101 aa0.31□□□□□ -2.36
GPHN-216ENST00000557678 U3KQA8 63 aa0.31□□□□□ -2.36
GPHN-216ENST00000557678 RGPD2P0DJD1 1756 aa0.31□□□□□ -2.36
GPHN-216ENST00000557678 GVINP1Q7Z2Y8 2422 aa0.3□□□□□ -2.36
GPHN-216ENST00000557678 FMN2Q9NZ56 1722 aa0.3□□□□□ -2.36
GPHN-216ENST00000557678 LTN1O94822 1766 aa0.3□□□□□ -2.36
GPHN-216ENST00000557678 BCORQ6W2J9 1755 aa0.3□□□□□ -2.36
GPHN-216ENST00000557678 NEXMIFQ5QGS0 1516 aa0.3□□□□□ -2.36
GPHN-216ENST00000557678 MYMXA0A1B0GTQ4 84 aa0.3□□□□□ -2.36
GPHN-216ENST00000557678 I3L3M4 83 aa0.3□□□□□ -2.36
GPHN-216ENST00000557678 SPINK4O60575 86 aa0.3□□□□□ -2.36
GPHN-216ENST00000557678 NDUFB1O75438 58 aa0.3□□□□□ -2.36
GPHN-216ENST00000557678 IGLC2P0DOY2 106 aa0.3□□□□□ -2.36
GPHN-216ENST00000557678 IGLC3P0DOY3 106 aa0.3□□□□□ -2.36
GPHN-216ENST00000557678 SPRR1AP35321 89 aa0.3□□□□□ -2.36
GPHN-216ENST00000557678 KRTAP21-1Q3LI58 79 aa0.3□□□□□ -2.36
GPHN-216ENST00000557678 MDN1Q9NU22 5596 aa0.3□□□□□ -2.36
GPHN-216ENST00000557678 CHD6Q8TD26 2715 aa0.29□□□□□ -2.36
GPHN-216ENST00000557678 UBR5O95071 2799 aaPredicted RBP0.29□□□□□ -2.36
GPHN-216ENST00000557678 NKTRP30414 1462 aaKnown RBP0.29□□□□□ -2.36
GPHN-216ENST00000557678 KMT2DO14686 5537 aa0.29□□□□□ -2.36
GPHN-216ENST00000557678 DCAF1Q9Y4B6 1507 aa0.29□□□□□ -2.36
GPHN-216ENST00000557678 SPTY2D1-AS1A0A0U1RR47 76 aa0.29□□□□□ -2.36
GPHN-216ENST00000557678 CEBPZOSA8MTT3 80 aa0.29□□□□□ -2.36
GPHN-216ENST00000557678 IQCF6A8MYZ5 107 aa0.29□□□□□ -2.36
GPHN-216ENST00000557678 DEFB112Q30KQ8 113 aa0.29□□□□□ -2.36
GPHN-216ENST00000557678 ST20Q9HBF5 79 aa0.29□□□□□ -2.36
GPHN-216ENST00000557678 NCOR1O75376 2440 aa0.29□□□□□ -2.36
GPHN-216ENST00000557678 OTOGQ6ZRI0 2925 aa0.29□□□□□ -2.36
GPHN-216ENST00000557678 ARHGAP35Q9NRY4 1499 aa0.29□□□□□ -2.36
GPHN-216ENST00000557678 SLIT1O75093 1534 aa0.28□□□□□ -2.36
GPHN-216ENST00000557678 LRRC7Q96NW7 1537 aa0.28□□□□□ -2.36
GPHN-216ENST00000557678 FRAS1Q86XX4 4008 aa0.28□□□□□ -2.36
GPHN-216ENST00000557678 MAST4O15021 2626 aa0.28□□□□□ -2.36
GPHN-216ENST00000557678 RGPD8O14715 1765 aaPredicted RBP0.28□□□□□ -2.36
GPHN-216ENST00000557678 RGPD5Q99666 1765 aa0.28□□□□□ -2.36
GPHN-216ENST00000557678 CCL22O00626 93 aa0.28□□□□□ -2.36
GPHN-216ENST00000557678 HMGA1P17096 107 aaKnown RBP0.28□□□□□ -2.36
GPHN-216ENST00000557678 SPRR1BP22528 89 aa0.28□□□□□ -2.36
GPHN-216ENST00000557678 GAFA1Q96PS6 74 aa0.28□□□□□ -2.36
GPHN-216ENST00000557678 CLIP1P30622 1438 aa0.28□□□□□ -2.37
GPHN-216ENST00000557678 NSD1Q96L73 2696 aaPredicted RBP0.28□□□□□ -2.37
GPHN-216ENST00000557678 URB2Q14146 1524 aaKnown RBP0.28□□□□□ -2.37
GPHN-216ENST00000557678 KDM5DQ9BY66 1539 aa0.28□□□□□ -2.37
GPHN-216ENST00000557678 WNK2Q9Y3S1 2297 aa0.27□□□□□ -2.37
GPHN-216ENST00000557678 PREX1Q8TCU6 1659 aa0.27□□□□□ -2.37
GPHN-216ENST00000557678 NCOR2Q9Y618 2525 aa0.27□□□□□ -2.37
GPHN-216ENST00000557678 CHD8Q9HCK8 2581 aa0.27□□□□□ -2.37
GPHN-216ENST00000557678 FLNAP21333 2647 aaKnown RBP0.27□□□□□ -2.37
GPHN-216ENST00000557678 TENM4Q6N022 2769 aa0.27□□□□□ -2.37
GPHN-216ENST00000557678 PKD1L1Q8TDX9 2849 aa0.27□□□□□ -2.37
GPHN-216ENST00000557678 A0A087WXM4 84 aa0.27□□□□□ -2.37
GPHN-216ENST00000557678 CPSF4LA6NMK7 179 aaKnown RBP0.27□□□□□ -2.37
GPHN-216ENST00000557678 TDRG1Q3Y452 100 aa0.27□□□□□ -2.37
GPHN-216ENST00000557678 ABCA2Q9BZC7 2435 aa0.27□□□□□ -2.37
GPHN-216ENST00000557678 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.27□□□□□ -2.37
GPHN-216ENST00000557678 SETXQ7Z333 2677 aaKnown RBP0.27□□□□□ -2.37
GPHN-216ENST00000557678 POLR1AO95602 1720 aaPredicted RBP0.27□□□□□ -2.37
GPHN-216ENST00000557678 RGPD1P0DJD0 1748 aa0.27□□□□□ -2.37
GPHN-216ENST00000557678 DMBT1Q9UGM3 2413 aaPredicted RBP0.26□□□□□ -2.37
GPHN-216ENST00000557678 TRAV21A0A0B4J279 112 aa0.26□□□□□ -2.37
GPHN-216ENST00000557678 IFI27P40305 119 aaPredicted RBP0.26□□□□□ -2.37
GPHN-216ENST00000557678 ATP5EP2Q5VTU8 51 aa0.26□□□□□ -2.37
GPHN-216ENST00000557678 HEPN1Q6WQI6 88 aa0.26□□□□□ -2.37
GPHN-216ENST00000557678 WFDC9Q8NEX5 89 aa0.26□□□□□ -2.37
GPHN-216ENST00000557678 DEFB105AQ8NG35 78 aa0.26□□□□□ -2.37
GPHN-216ENST00000557678 FXYD6Q9H0Q3 95 aa0.26□□□□□ -2.37
GPHN-216ENST00000557678 ERVK-7P63135 1459 aa0.26□□□□□ -2.37
GPHN-216ENST00000557678 ABCC1P33527 1531 aa0.26□□□□□ -2.37
GPHN-216ENST00000557678 MAGI3Q5TCQ9 1506 aa0.26□□□□□ -2.37
GPHN-216ENST00000557678 CFAP74Q9C0B2 1584 aa0.26□□□□□ -2.37
GPHN-216ENST00000557678 DIP2BQ9P265 1576 aa0.26□□□□□ -2.37
GPHN-216ENST00000557678 PTPN23Q9H3S7 1636 aa0.26□□□□□ -2.37
GPHN-216ENST00000557678 PIK3C2BO00750 1634 aa0.25□□□□□ -2.37
GPHN-216ENST00000557678 CCDC88BA6NC98 1476 aa0.25□□□□□ -2.37
GPHN-216ENST00000557678 UMAD1C9J7I0 102 aa0.25□□□□□ -2.37
GPHN-216ENST00000557678 H3BUT2 72 aa0.25□□□□□ -2.37
GPHN-216ENST00000557678 SMIM13P0DJ93 91 aa0.25□□□□□ -2.37
GPHN-216ENST00000557678 COX7BP24311 80 aa0.25□□□□□ -2.37
GPHN-216ENST00000557678 COX6B2Q6YFQ2 88 aa0.25□□□□□ -2.37
GPHN-216ENST00000557678 CDKN2A-AS1Q9UH64 79 aa0.25□□□□□ -2.37
GPHN-216ENST00000557678 APLNQ9ULZ1 77 aa0.25□□□□□ -2.37
GPHN-216ENST00000557678 TRANK1O15050 2925 aa0.25□□□□□ -2.37
GPHN-216ENST00000557678 HIVEP3Q5T1R4 2406 aa0.25□□□□□ -2.37
GPHN-216ENST00000557678 SCN11AQ9UI33 1791 aa0.24□□□□□ -2.37
GPHN-216ENST00000557678 VWFP04275 2813 aa0.24□□□□□ -2.37
GPHN-216ENST00000557678 FLNCQ14315 2725 aa0.24□□□□□ -2.37
GPHN-216ENST00000557678 CEP170BQ9Y4F5 1589 aaPredicted RBP0.24□□□□□ -2.37
GPHN-216ENST00000557678 MAP1BP46821 2468 aaKnown RBP0.24□□□□□ -2.37
GPHN-216ENST00000557678 CSPG4Q6UVK1 2322 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms