RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 XCL1P47992 114 aa3.33□□□□□ -1.88
ATXN3-247ENST00000557311 FXYD7P58549 80 aa3.33□□□□□ -1.88
ATXN3-247ENST00000557311 RIGQ13278 110 aa3.33□□□□□ -1.88
ATXN3-247ENST00000557311 CIRBPQ14011 172 aaKnown RBP3.33□□□□□ -1.88
ATXN3-247ENST00000557311 Q1RN00 199 aa3.33□□□□□ -1.88
ATXN3-247ENST00000557311 S100A7L2Q5SY68 101 aa3.33□□□□□ -1.88
ATXN3-247ENST00000557311 Q6JHZ5 121 aa3.33□□□□□ -1.88
ATXN3-247ENST00000557311 ZNF818PQ6ZRF7 136 aa3.33□□□□□ -1.88
ATXN3-247ENST00000557311 Q6ZVQ6 151 aa3.33□□□□□ -1.88
ATXN3-247ENST00000557311 SLC25A29Q8N8R3 303 aa3.33□□□□□ -1.88
ATXN3-247ENST00000557311 TMEM75Q8N9X5 138 aa3.33□□□□□ -1.88
ATXN3-247ENST00000557311 TOMM6Q96B49 74 aa3.33□□□□□ -1.88
ATXN3-247ENST00000557311 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.32□□□□□ -1.88
ATXN3-247ENST00000557311 M0R381 172 aa3.32□□□□□ -1.88
ATXN3-247ENST00000557311 IGLV2-11P01706 119 aa3.32□□□□□ -1.88
ATXN3-247ENST00000557311 PRSS1P07477 247 aa3.32□□□□□ -1.88
ATXN3-247ENST00000557311 CFC1BP0CG36 223 aa3.32□□□□□ -1.88
ATXN3-247ENST00000557311 CFC1P0CG37 223 aa3.32□□□□□ -1.88
ATXN3-247ENST00000557311 DEFB130BP0DP73 79 aa3.32□□□□□ -1.88
ATXN3-247ENST00000557311 DEFB130AP0DP74 79 aa3.32□□□□□ -1.88
ATXN3-247ENST00000557311 ZNF22P17026 224 aaPredicted RBP3.32□□□□□ -1.88
ATXN3-247ENST00000557311 ZNF138P52744 262 aa3.32□□□□□ -1.88
ATXN3-247ENST00000557311 KRTAP10-1P60331 282 aa3.32□□□□□ -1.88
ATXN3-247ENST00000557311 PRCDQ00LT1 54 aa3.32□□□□□ -1.88
ATXN3-247ENST00000557311 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
ATXN3-247ENST00000557311 DAND5Q8N907 189 aa3.32□□□□□ -1.88
ATXN3-247ENST00000557311 RPP21Q9H633 154 aaKnown RBP3.32□□□□□ -1.88
ATXN3-247ENST00000557311 FLG2Q5D862 2391 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-247ENST00000557311 TRAV8-3A0A0A6YYJ7 113 aa3.31□□□□□ -1.88
ATXN3-247ENST00000557311 TRBV30A0A0K0K1B3 111 aa3.31□□□□□ -1.88
ATXN3-247ENST00000557311 NXPH4O95158 308 aa3.31□□□□□ -1.88
ATXN3-247ENST00000557311 IGKV1-17P01599 117 aa3.31□□□□□ -1.88
ATXN3-247ENST00000557311 MT3P25713 68 aa3.31□□□□□ -1.88
ATXN3-247ENST00000557311 FUSP35637 526 aaKnown RBP eCLIP3.31□□□□□ -1.88
ATXN3-247ENST00000557311 ESRGQ1W209 222 aa3.31□□□□□ -1.88
ATXN3-247ENST00000557311 ZNF876PQ49A33 203 aa3.31□□□□□ -1.88
ATXN3-247ENST00000557311 C20orf197Q8N268 126 aa3.31□□□□□ -1.88
ATXN3-247ENST00000557311 TTTY13Q9BZ97 58 aa3.31□□□□□ -1.88
ATXN3-247ENST00000557311 LINC00474Q9P2X8 69 aa3.31□□□□□ -1.88
ATXN3-247ENST00000557311 TRAV13-2A0A0B4J235 113 aa3.3□□□□□ -1.88
ATXN3-247ENST00000557311 A8MUN3 132 aa3.3□□□□□ -1.88
ATXN3-247ENST00000557311 IBA57-AS1B1ANH7 110 aa3.3□□□□□ -1.88
ATXN3-247ENST00000557311 H7BZZ5 65 aa3.3□□□□□ -1.88
ATXN3-247ENST00000557311 LST1O00453 97 aa3.3□□□□□ -1.88
ATXN3-247ENST00000557311 IGLV2-8P01709 118 aa3.3□□□□□ -1.88
ATXN3-247ENST00000557311 LINC00315P59091 139 aa3.3□□□□□ -1.88
ATXN3-247ENST00000557311 DEFB1P60022 68 aa3.3□□□□□ -1.88
ATXN3-247ENST00000557311 RHOHQ15669 191 aa3.3□□□□□ -1.88
ATXN3-247ENST00000557311 Q6ZRN7 208 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-247ENST00000557311 DEFB104AQ8WTQ1 72 aa3.3□□□□□ -1.88
ATXN3-247ENST00000557311 MRPL36Q9P0J6 103 aaKnown RBP3.3□□□□□ -1.88
ATXN3-247ENST00000557311 SRRM2Q9UQ35 2752 aaKnown RBP3.3□□□□□ -1.88
ATXN3-247ENST00000557311 HMCN2Q8NDA2 5059 aa3.3□□□□□ -1.88
ATXN3-247ENST00000557311 TRAV7A0A075B6U4 112 aa3.29□□□□□ -1.88
ATXN3-247ENST00000557311 A0A087WTM6 91 aa3.29□□□□□ -1.88
ATXN3-247ENST00000557311 A0A096LNJ9 63 aa3.29□□□□□ -1.88
ATXN3-247ENST00000557311 A0A0J9YX75 114 aa3.29□□□□□ -1.88
ATXN3-247ENST00000557311 A0A1B0GUT8 65 aa3.29□□□□□ -1.88
ATXN3-247ENST00000557311 ZNF815PA8K554 130 aa3.29□□□□□ -1.88
ATXN3-247ENST00000557311 H3BNG1 76 aa3.29□□□□□ -1.88
ATXN3-247ENST00000557311 H7C423 109 aa3.29□□□□□ -1.88
ATXN3-247ENST00000557311 COX7A2LO14548 114 aa3.29□□□□□ -1.88
ATXN3-247ENST00000557311 IGHV3-33P01772 117 aa3.29□□□□□ -1.88
ATXN3-247ENST00000557311 PRM2P04554 102 aa3.29□□□□□ -1.88
ATXN3-247ENST00000557311 S100A4P26447 101 aaKnown RBP3.29□□□□□ -1.88
ATXN3-247ENST00000557311 UBE2AP49459 152 aa3.29□□□□□ -1.88
ATXN3-247ENST00000557311 ZNF80P51504 273 aaPredicted RBP3.29□□□□□ -1.88
ATXN3-247ENST00000557311 MP68P56378 58 aa3.29□□□□□ -1.88
ATXN3-247ENST00000557311 SEC61BP60468 96 aaKnown RBP3.29□□□□□ -1.88
ATXN3-247ENST00000557311 CXCL6P80162 114 aa3.29□□□□□ -1.88
ATXN3-247ENST00000557311 SPINK9Q5DT21 86 aa3.29□□□□□ -1.88
ATXN3-247ENST00000557311 ATP5EP2Q5VTU8 51 aa3.29□□□□□ -1.88
ATXN3-247ENST00000557311 C7orf65Q6ZTY9 151 aa3.29□□□□□ -1.88
ATXN3-247ENST00000557311 FAM19A3Q7Z5A8 133 aa3.29□□□□□ -1.88
ATXN3-247ENST00000557311 ORMDL3Q8N138 153 aa3.29□□□□□ -1.88
ATXN3-247ENST00000557311 NKAPP1Q8N9T2 125 aa3.29□□□□□ -1.88
ATXN3-247ENST00000557311 SMCR5Q8TEV8 140 aa3.29□□□□□ -1.88
ATXN3-247ENST00000557311 VPS13BQ7Z7G8 4022 aa3.28□□□□□ -1.88
ATXN3-247ENST00000557311 A0A087WYN8 130 aa3.28□□□□□ -1.88
ATXN3-247ENST00000557311 LOC389332A0A1B0GUA5 103 aa3.28□□□□□ -1.88
ATXN3-247ENST00000557311 A8MTW9 85 aa3.28□□□□□ -1.88
ATXN3-247ENST00000557311 F8WEM9 126 aa3.28□□□□□ -1.88
ATXN3-247ENST00000557311 SOCS3O14543 225 aa3.28□□□□□ -1.88
ATXN3-247ENST00000557311 INSP01308 110 aa3.28□□□□□ -1.88
ATXN3-247ENST00000557311 IGKV1-39P01597 117 aa3.28□□□□□ -1.88
ATXN3-247ENST00000557311 IGKV1D-39P04432 117 aa3.28□□□□□ -1.88
ATXN3-247ENST00000557311 KLKP1Q107X0 134 aa3.28□□□□□ -1.88
ATXN3-247ENST00000557311 LYPD5Q6UWN5 251 aa3.28□□□□□ -1.88
ATXN3-247ENST00000557311 PHF5AQ7RTV0 110 aaKnown RBP3.28□□□□□ -1.88
ATXN3-247ENST00000557311 MRPL35Q9NZE8 188 aaKnown RBP3.28□□□□□ -1.88
ATXN3-247ENST00000557311 TRAV12-1A0A0B4J245 112 aa3.27□□□□□ -1.89
ATXN3-247ENST00000557311 A0A0J9YY99 117 aa3.27□□□□□ -1.89
ATXN3-247ENST00000557311 GAS8-AS1O95177 125 aa3.27□□□□□ -1.89
ATXN3-247ENST00000557311 DNAL4O96015 105 aa3.27□□□□□ -1.89
ATXN3-247ENST00000557311 P0C879 139 aa3.27□□□□□ -1.89
ATXN3-247ENST00000557311 Q1T7F1 81 aa3.27□□□□□ -1.89
ATXN3-247ENST00000557311 SOSTDC1Q6X4U4 206 aa3.27□□□□□ -1.89
ATXN3-247ENST00000557311 OPRPNQ99935 248 aaPredicted RBP3.27□□□□□ -1.89
ATXN3-247ENST00000557311 TIMM21Q9BVV7 248 aa3.27□□□□□ -1.89
ATXN3-247ENST00000557311 NOP10Q9NPE3 64 aaKnown RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms