RNA–Protein interactions for RNA: ENST00000557084.1

SYNE2-226, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-226ENST00000557084 ODF1Q14990 250 aa7.25□□□□□ -1.25
SYNE2-226ENST00000557084 SERF1AO75920 110 aa7.24□□□□□ -1.25
SYNE2-226ENST00000557084 LEPROTL1O95214 131 aa7.24□□□□□ -1.25
SYNE2-226ENST00000557084 LINC00158P58513 81 aa7.24□□□□□ -1.25
SYNE2-226ENST00000557084 LINC00310P59036 64 aa7.24□□□□□ -1.25
SYNE2-226ENST00000557084 LINC00167Q96N53 147 aa7.24□□□□□ -1.25
SYNE2-226ENST00000557084 UBR4Q5T4S7 5183 aa7.23□□□□□ -1.25
SYNE2-226ENST00000557084 TMEM223A0PJW6 202 aa7.23□□□□□ -1.25
SYNE2-226ENST00000557084 ZNF861PO60384 105 aa7.23□□□□□ -1.25
SYNE2-226ENST00000557084 RPL28P46779 137 aaKnown RBP7.23□□□□□ -1.25
SYNE2-226ENST00000557084 RPL24P83731 157 aaKnown RBP7.23□□□□□ -1.25
SYNE2-226ENST00000557084 SND1-IT1Q9HBX3 110 aa7.23□□□□□ -1.25
SYNE2-226ENST00000557084 HSPB8Q9UJY1 196 aa7.23□□□□□ -1.25
SYNE2-226ENST00000557084 IGLV5-37A0A075B6J1 123 aa7.22□□□□□ -1.25
SYNE2-226ENST00000557084 BCE1O60756 84 aa7.22□□□□□ -1.25
SYNE2-226ENST00000557084 PRR26Q8N8Z3 221 aa7.22□□□□□ -1.25
SYNE2-226ENST00000557084 FABP4P15090 132 aa7.21□□□□□ -1.26
SYNE2-226ENST00000557084 KRTAP4-8Q9BYQ9 185 aa7.21□□□□□ -1.26
SYNE2-226ENST00000557084 IGLV1-50A0A075B6I6 118 aa7.2□□□□□ -1.26
SYNE2-226ENST00000557084 IGKV2-28A0A075B6P5 120 aa7.2□□□□□ -1.26
SYNE2-226ENST00000557084 A0A0U1RRA0 63 aa7.2□□□□□ -1.26
SYNE2-226ENST00000557084 HIST1H2BKO60814 126 aa7.2□□□□□ -1.26
SYNE2-226ENST00000557084 IGKV2D-28P01615 120 aa7.2□□□□□ -1.26
SYNE2-226ENST00000557084 HIST1H2BJP06899 126 aa7.2□□□□□ -1.26
SYNE2-226ENST00000557084 HIST1H2BOP23527 126 aa7.2□□□□□ -1.26
SYNE2-226ENST00000557084 PLNP26678 52 aa7.2□□□□□ -1.26
SYNE2-226ENST00000557084 HIST1H2BBP33778 126 aa7.2□□□□□ -1.26
SYNE2-226ENST00000557084 UBE2AP49459 152 aa7.2□□□□□ -1.26
SYNE2-226ENST00000557084 HIST1H2BDP58876 126 aa7.2□□□□□ -1.26
SYNE2-226ENST00000557084 HIST1H2BCP62807 126 aa7.2□□□□□ -1.26
SYNE2-226ENST00000557084 HIST2H2BEQ16778 126 aa7.2□□□□□ -1.26
SYNE2-226ENST00000557084 MEIG1Q5JSS6 88 aa7.2□□□□□ -1.26
SYNE2-226ENST00000557084 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.2□□□□□ -1.26
SYNE2-226ENST00000557084 HIST1H2BHQ93079 126 aa7.2□□□□□ -1.26
SYNE2-226ENST00000557084 HIST1H2BNQ99877 126 aa7.2□□□□□ -1.26
SYNE2-226ENST00000557084 HIST1H2BMQ99879 126 aa7.2□□□□□ -1.26
SYNE2-226ENST00000557084 RPL13AP40429 203 aaKnown RBP7.19□□□□□ -1.26
SYNE2-226ENST00000557084 MYMXA0A1B0GTQ4 84 aa7.18□□□□□ -1.26
SYNE2-226ENST00000557084 LINC00587B1AMM8 73 aa7.18□□□□□ -1.26
SYNE2-226ENST00000557084 DPM2O94777 84 aa7.18□□□□□ -1.26
SYNE2-226ENST00000557084 VPREB1P12018 145 aa7.18□□□□□ -1.26
SYNE2-226ENST00000557084 HERVK_113P61574 105 aa7.18□□□□□ -1.26
SYNE2-226ENST00000557084 HERV-K104P63124 156 aa7.18□□□□□ -1.26
SYNE2-226ENST00000557084 NDUFA12Q9UI09 145 aa7.18□□□□□ -1.26
SYNE2-226ENST00000557084 SMIM13P0DJ93 91 aa7.17□□□□□ -1.26
SYNE2-226ENST00000557084 MAP1LC3CQ9BXW4 147 aa7.17□□□□□ -1.26
SYNE2-226ENST00000557084 LRP2P98164 4655 aa7.16□□□□□ -1.26
SYNE2-226ENST00000557084 KRTAP1-4P0C5Y4 121 aa7.16□□□□□ -1.26
SYNE2-226ENST00000557084 PLEKHB2Q96CS7 222 aa7.16□□□□□ -1.26
SYNE2-226ENST00000557084 LEPROTO15243 131 aa7.15□□□□□ -1.26
SYNE2-226ENST00000557084 IGKCP01834 107 aa7.15□□□□□ -1.26
SYNE2-226ENST00000557084 FAM19A1Q7Z5A9 133 aa7.15□□□□□ -1.26
SYNE2-226ENST00000557084 BOD1L2Q8IYS8 172 aa7.15□□□□□ -1.26
SYNE2-226ENST00000557084 PMCHL2Q9BQD1 86 aa7.15□□□□□ -1.26
SYNE2-226ENST00000557084 TMEM238C9JI98 176 aa7.14□□□□□ -1.27
SYNE2-226ENST00000557084 M0R378 163 aa7.14□□□□□ -1.27
SYNE2-226ENST00000557084 LGALS3P17931 250 aaKnown RBP7.14□□□□□ -1.27
SYNE2-226ENST00000557084 COA6Q5JTJ3 125 aaKnown RBP7.14□□□□□ -1.27
SYNE2-226ENST00000557084 MIR7-3HGQ8N6C7 128 aa7.14□□□□□ -1.27
SYNE2-226ENST00000557084 TMEM126AQ9H061 195 aa7.14□□□□□ -1.27
SYNE2-226ENST00000557084 J3QQQ9 107 aa7.13□□□□□ -1.27
SYNE2-226ENST00000557084 CRYGAP11844 174 aa7.13□□□□□ -1.27
SYNE2-226ENST00000557084 PRLHP81277 87 aa7.12□□□□□ -1.27
SYNE2-226ENST00000557084 Q8NDZ9 215 aa7.12□□□□□ -1.27
SYNE2-226ENST00000557084 NCR3O14931 201 aa7.11□□□□□ -1.27
SYNE2-226ENST00000557084 NMUP48645 174 aa7.11□□□□□ -1.27
SYNE2-226ENST00000557084 TSPEAR-AS2P59090 65 aa7.11□□□□□ -1.27
SYNE2-226ENST00000557084 S100A12P80511 92 aa7.11□□□□□ -1.27
SYNE2-226ENST00000557084 MIEN1Q9BRT3 115 aa7.11□□□□□ -1.27
SYNE2-226ENST00000557084 KRTAP13-1Q8IUC0 172 aa7.1□□□□□ -1.27
SYNE2-226ENST00000557084 IGKV2D-26A0A0A0MRZ7 120 aa7.09□□□□□ -1.27
SYNE2-226ENST00000557084 SYS1-DBNDD2H3BUS1 97 aa7.09□□□□□ -1.27
SYNE2-226ENST00000557084 DAND5Q8N907 189 aa7.09□□□□□ -1.27
SYNE2-226ENST00000557084 TYMSOSQ8TAI1 123 aa7.09□□□□□ -1.27
SYNE2-226ENST00000557084 HIGD2AQ9BW72 106 aa7.09□□□□□ -1.27
SYNE2-226ENST00000557084 ANAPC11Q9NYG5 84 aa7.09□□□□□ -1.27
SYNE2-226ENST00000557084 KRTAP9-2Q9BYQ4 174 aa7.08□□□□□ -1.28
SYNE2-226ENST00000557084 A0A087X002 238 aa7.07□□□□□ -1.28
SYNE2-226ENST00000557084 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.07□□□□□ -1.28
SYNE2-226ENST00000557084 PRYO14603 147 aa7.07□□□□□ -1.28
SYNE2-226ENST00000557084 ETDCA0A1B0GVM5 59 aa7.06□□□□□ -1.28
SYNE2-226ENST00000557084 E9PLD3 99 aa7.06□□□□□ -1.28
SYNE2-226ENST00000557084 TSPAN13O95857 204 aa7.06□□□□□ -1.28
SYNE2-226ENST00000557084 FAM229BQ4G0N7 80 aa7.06□□□□□ -1.28
SYNE2-226ENST00000557084 PET117Q6UWS5 81 aa7.06□□□□□ -1.28
SYNE2-226ENST00000557084 RNF213Q63HN8 5207 aa7.06□□□□□ -1.28
SYNE2-226ENST00000557084 TRBV10-3A0A0K0K1G6 114 aa7.05□□□□□ -1.28
SYNE2-226ENST00000557084 KRTAP9-6A0A140TA67 174 aa7.05□□□□□ -1.28
SYNE2-226ENST00000557084 PRR4Q16378 134 aa7.05□□□□□ -1.28
SYNE2-226ENST00000557084 KCNQ1DNQ9H478 68 aa7.05□□□□□ -1.28
SYNE2-226ENST00000557084 DDTP30046 118 aa7.04□□□□□ -1.28
SYNE2-226ENST00000557084 KRTDAPP60985 99 aa7.04□□□□□ -1.28
SYNE2-226ENST00000557084 ANKRD39Q53RE8 183 aa7.04□□□□□ -1.28
SYNE2-226ENST00000557084 S100A7L2Q5SY68 101 aa7.04□□□□□ -1.28
SYNE2-226ENST00000557084 LINC01545Q5VT33 79 aa7.04□□□□□ -1.28
SYNE2-226ENST00000557084 SPANXB1Q9NS25 103 aaPredicted RBP7.04□□□□□ -1.28
SYNE2-226ENST00000557084 ZNF706Q9Y5V0 76 aaPredicted RBP7.04□□□□□ -1.28
SYNE2-226ENST00000557084 LOC107984156A0A0G2JMH3 177 aa7.03□□□□□ -1.28
SYNE2-226ENST00000557084 A0A0J9YXY3 114 aa7.03□□□□□ -1.28
SYNE2-226ENST00000557084 TRBV10-2A0A0K0K1G8 114 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms