RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 PLECQ15149 4684 aaKnown RBP5.96□□□□□ -1.46
TDP1-210ENST00000554976 IGLV10-54A0A075B6I4 117 aa5.96□□□□□ -1.46
TDP1-210ENST00000554976 COX7A2LO14548 114 aa5.96□□□□□ -1.46
TDP1-210ENST00000554976 ATXN8Q156A1 80 aa5.96□□□□□ -1.46
TDP1-210ENST00000554976 C4orf26Q17RF5 130 aa5.96□□□□□ -1.46
TDP1-210ENST00000554976 IBA57-AS1B1ANH7 110 aa5.95□□□□□ -1.46
TDP1-210ENST00000554976 HRCT1Q6UXD1 115 aa5.95□□□□□ -1.46
TDP1-210ENST00000554976 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.95□□□□□ -1.46
TDP1-210ENST00000554976 C2orf48Q96LS8 159 aa5.94□□□□□ -1.46
TDP1-210ENST00000554976 NOTCH1P46531 2555 aa5.94□□□□□ -1.46
TDP1-210ENST00000554976 H3BT86 120 aa5.93□□□□□ -1.46
TDP1-210ENST00000554976 ACYP1P07311 99 aa5.93□□□□□ -1.46
TDP1-210ENST00000554976 TRACP01848 142 aa5.93□□□□□ -1.46
TDP1-210ENST00000554976 NPC2P61916 151 aa5.93□□□□□ -1.46
TDP1-210ENST00000554976 CIRBPQ14011 172 aaKnown RBP5.93□□□□□ -1.46
TDP1-210ENST00000554976 C2orf82Q6UX34 121 aa5.93□□□□□ -1.46
TDP1-210ENST00000554976 OXTP01178 125 aa5.93□□□□□ -1.46
TDP1-210ENST00000554976 CXCL5P42830 114 aa5.93□□□□□ -1.46
TDP1-210ENST00000554976 SEC61GP60059 68 aa5.93□□□□□ -1.46
TDP1-210ENST00000554976 C15orf56Q8N910 161 aa5.93□□□□□ -1.46
TDP1-210ENST00000554976 TOMM7Q9P0U1 55 aa5.93□□□□□ -1.46
TDP1-210ENST00000554976 APLNQ9ULZ1 77 aa5.93□□□□□ -1.46
TDP1-210ENST00000554976 IGKV2-28A0A075B6P5 120 aa5.92□□□□□ -1.46
TDP1-210ENST00000554976 IGKV2D-28P01615 120 aa5.92□□□□□ -1.46
TDP1-210ENST00000554976 VPS13DQ5THJ4 4388 aa5.92□□□□□ -1.46
TDP1-210ENST00000554976 GVQW2A0A096LPI5 108 aaPredicted RBP5.92□□□□□ -1.46
TDP1-210ENST00000554976 MIR7-3HGQ8N6C7 128 aa5.92□□□□□ -1.46
TDP1-210ENST00000554976 COX17Q14061 63 aa5.91□□□□□ -1.46
TDP1-210ENST00000554976 C10orf25Q5T742 122 aa5.91□□□□□ -1.46
TDP1-210ENST00000554976 C6orf223Q8N319 242 aa5.91□□□□□ -1.46
TDP1-210ENST00000554976 DNAH10Q8IVF4 4471 aa5.91□□□□□ -1.46
TDP1-210ENST00000554976 DNAH6Q9C0G6 4158 aa5.91□□□□□ -1.46
TDP1-210ENST00000554976 HIST1H4AP62805 103 aaKnown RBP5.91□□□□□ -1.46
TDP1-210ENST00000554976 LINC00643Q86TS7 51 aa5.91□□□□□ -1.46
TDP1-210ENST00000554976 MEGF8Q7Z7M0 2845 aa5.91□□□□□ -1.46
TDP1-210ENST00000554976 TRBV30A0A0K0K1B3 111 aa5.91□□□□□ -1.46
TDP1-210ENST00000554976 ATOX1O00244 68 aa5.91□□□□□ -1.46
TDP1-210ENST00000554976 CCL18P55774 89 aa5.91□□□□□ -1.46
TDP1-210ENST00000554976 C6orf226Q5I0X4 101 aa5.91□□□□□ -1.46
TDP1-210ENST00000554976 A0A0U1RRA0 63 aa5.9□□□□□ -1.46
TDP1-210ENST00000554976 CRPP02741 224 aa5.9□□□□□ -1.46
TDP1-210ENST00000554976 PRSS2P07478 247 aa5.9□□□□□ -1.46
TDP1-210ENST00000554976 SDIM1Q6ZPB5 146 aa5.9□□□□□ -1.47
TDP1-210ENST00000554976 Q8NDZ9 215 aa5.9□□□□□ -1.47
TDP1-210ENST00000554976 hADV29S1A0JD25 119 aa5.89□□□□□ -1.47
TDP1-210ENST00000554976 COPS9Q8WXC6 57 aa5.89□□□□□ -1.47
TDP1-210ENST00000554976 TRIAP1O43715 76 aa5.89□□□□□ -1.47
TDP1-210ENST00000554976 SPAG11BQ08648 103 aa5.89□□□□□ -1.47
TDP1-210ENST00000554976 UNQ6190/PRO20217Q6UXQ8 127 aa5.88□□□□□ -1.47
TDP1-210ENST00000554976 LINC00337Q8N6G1 96 aa5.88□□□□□ -1.47
TDP1-210ENST00000554976 C6orf48Q9UBA6 75 aa5.88□□□□□ -1.47
TDP1-210ENST00000554976 C9orf116Q5BN46 136 aaPredicted RBP5.88□□□□□ -1.47
TDP1-210ENST00000554976 KRTAP1-5Q9BYS1 174 aa5.88□□□□□ -1.47
TDP1-210ENST00000554976 MUC7Q8TAX7 377 aa5.88□□□□□ -1.47
TDP1-210ENST00000554976 C1orf43Q9BWL3 253 aa5.88□□□□□ -1.47
TDP1-210ENST00000554976 DSCR8Q96T75 97 aa5.87□□□□□ -1.47
TDP1-210ENST00000554976 PFN2P35080 140 aa5.87□□□□□ -1.47
TDP1-210ENST00000554976 LINC00158P58513 81 aa5.87□□□□□ -1.47
TDP1-210ENST00000554976 CYSTM1Q9H1C7 97 aa5.87□□□□□ -1.47
TDP1-210ENST00000554976 V9GYY9 64 aa5.87□□□□□ -1.47
TDP1-210ENST00000554976 MGAM2Q2M2H8 2515 aa5.87□□□□□ -1.47
TDP1-210ENST00000554976 SND1-IT1Q9HBX3 110 aa5.86□□□□□ -1.47
TDP1-210ENST00000554976 NDUFC2O95298 119 aa5.86□□□□□ -1.47
TDP1-210ENST00000554976 CASC10Q5T4H9 136 aa5.86□□□□□ -1.47
TDP1-210ENST00000554976 SMCR5Q8TEV8 140 aa5.85□□□□□ -1.47
TDP1-210ENST00000554976 LINC00336Q6ZUF6 198 aa5.85□□□□□ -1.47
TDP1-210ENST00000554976 NDUFC2-KCTD14E9PQ53 114 aa5.85□□□□□ -1.47
TDP1-210ENST00000554976 EPM2AB3EWF7 344 aa5.84□□□□□ -1.47
TDP1-210ENST00000554976 RPL28P46779 137 aaKnown RBP5.84□□□□□ -1.47
TDP1-210ENST00000554976 Q1RN00 199 aa5.84□□□□□ -1.47
TDP1-210ENST00000554976 SLPIP03973 132 aa5.84□□□□□ -1.47
TDP1-210ENST00000554976 Q6ZRU5 148 aa5.84□□□□□ -1.47
TDP1-210ENST00000554976 SERP2Q8N6R1 65 aa5.84□□□□□ -1.47
TDP1-210ENST00000554976 TRAV13-2A0A0B4J235 113 aa5.83□□□□□ -1.48
TDP1-210ENST00000554976 RPL18AQ02543 176 aaKnown RBP5.83□□□□□ -1.48
TDP1-210ENST00000554976 NUPR2A6NF83 97 aa5.83□□□□□ -1.48
TDP1-210ENST00000554976 H7C2G1 150 aa5.83□□□□□ -1.48
TDP1-210ENST00000554976 LST1O00453 97 aa5.83□□□□□ -1.48
TDP1-210ENST00000554976 HIGD2BQ4VC39 106 aa5.83□□□□□ -1.48
TDP1-210ENST00000554976 ALMS1Q8TCU4 4167 aa5.83□□□□□ -1.48
TDP1-210ENST00000554976 IGKV2D-24A0A075B6R9 120 aa5.82□□□□□ -1.48
TDP1-210ENST00000554976 COX6CP09669 75 aa5.82□□□□□ -1.48
TDP1-210ENST00000554976 FRAS1Q86XX4 4008 aa5.82□□□□□ -1.48
TDP1-210ENST00000554976 DNAH2Q9P225 4427 aa5.82□□□□□ -1.48
TDP1-210ENST00000554976 PKIGQ9Y2B9 76 aa5.82□□□□□ -1.48
TDP1-210ENST00000554976 SMIM11BQ8TCY0 68 aa5.81□□□□□ -1.48
TDP1-210ENST00000554976 KMT2AQ03164 3969 aa5.81□□□□□ -1.48
TDP1-210ENST00000554976 TLX1NBP0CAT3 122 aa5.81□□□□□ -1.48
TDP1-210ENST00000554976 CLEC2BQ92478 149 aa5.81□□□□□ -1.48
TDP1-210ENST00000554976 FAM218AQ96MZ4 157 aa5.81□□□□□ -1.48
TDP1-210ENST00000554976 Q9HAA7 133 aa5.81□□□□□ -1.48
TDP1-210ENST00000554976 PRR3P79522 188 aaKnown RBP5.8□□□□□ -1.48
TDP1-210ENST00000554976 C4orf48Q5BLP8 95 aa5.8□□□□□ -1.48
TDP1-210ENST00000554976 STAB2Q8WWQ8 2551 aa5.8□□□□□ -1.48
TDP1-210ENST00000554976 ZNF561-AS1K7EIQ3 104 aa5.8□□□□□ -1.48
TDP1-210ENST00000554976 CAMK2N2Q96S95 79 aa5.8□□□□□ -1.48
TDP1-210ENST00000554976 USP17L23D6RBM5 183 aa5.8□□□□□ -1.48
TDP1-210ENST00000554976 C1orf195Q5TG92 126 aa5.8□□□□□ -1.48
TDP1-210ENST00000554976 Q6ZRN7 208 aaPredicted RBP5.8□□□□□ -1.48
TDP1-210ENST00000554976 Q6ZRP5 223 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms