RNA–Protein interactions for RNA: ENST00000554423.1

IFT43-208, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-208ENST00000554423 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.02□□□□□ -2.25
IFT43-208ENST00000554423 TRBV10-1A0A0K0K1A3 114 aa1.02□□□□□ -2.25
IFT43-208ENST00000554423 A0A1B0GV72 72 aa1.02□□□□□ -2.25
IFT43-208ENST00000554423 TRBV6-4A0A1B0GX49 114 aa1.02□□□□□ -2.25
IFT43-208ENST00000554423 C9JAW5 83 aa1.02□□□□□ -2.25
IFT43-208ENST00000554423 F8W1H4 67 aa1.02□□□□□ -2.25
IFT43-208ENST00000554423 NDUFA1O15239 70 aa1.02□□□□□ -2.25
IFT43-208ENST00000554423 IGHV3-33P01772 117 aa1.02□□□□□ -2.25
IFT43-208ENST00000554423 PFN2P35080 140 aa1.02□□□□□ -2.25
IFT43-208ENST00000554423 XCL1P47992 114 aa1.02□□□□□ -2.25
IFT43-208ENST00000554423 CMC4P56277 68 aaPredicted RBP1.02□□□□□ -2.25
IFT43-208ENST00000554423 LINC00158P58513 81 aa1.02□□□□□ -2.25
IFT43-208ENST00000554423 DAD1P61803 113 aa1.02□□□□□ -2.25
IFT43-208ENST00000554423 MIAQ16674 131 aa1.02□□□□□ -2.25
IFT43-208ENST00000554423 ETDBQ3ZM63 59 aa1.02□□□□□ -2.25
IFT43-208ENST00000554423 LYRM7Q5U5X0 104 aa1.02□□□□□ -2.25
IFT43-208ENST00000554423 ZFAND6Q6FIF0 208 aa1.02□□□□□ -2.25
IFT43-208ENST00000554423 IGSF10Q6WRI0 2623 aa1.02□□□□□ -2.25
IFT43-208ENST00000554423 SOSTDC1Q6X4U4 206 aa1.02□□□□□ -2.25
IFT43-208ENST00000554423 DAZ4Q86SG3 579 aaKnown RBP1.02□□□□□ -2.25
IFT43-208ENST00000554423 SBSPONQ8IVN8 264 aa1.02□□□□□ -2.25
IFT43-208ENST00000554423 ANKRD29Q8N6D5 301 aa1.02□□□□□ -2.25
IFT43-208ENST00000554423 SPANXA2-OT1Q8N9U9 137 aa1.02□□□□□ -2.25
IFT43-208ENST00000554423 ATP6V0E2Q8NHE4 81 aa1.02□□□□□ -2.25
IFT43-208ENST00000554423 CIRBP-AS1Q8TBR5 109 aa1.02□□□□□ -2.25
IFT43-208ENST00000554423 CLEC2BQ92478 149 aa1.02□□□□□ -2.25
IFT43-208ENST00000554423 SPANXDQ9BXN6 97 aa1.02□□□□□ -2.25
IFT43-208ENST00000554423 GTSF1LQ9H1H1 148 aa1.02□□□□□ -2.25
IFT43-208ENST00000554423 CDC42SE2Q9NRR3 84 aa1.02□□□□□ -2.25
IFT43-208ENST00000554423 SPANXCQ9NY87 97 aa1.02□□□□□ -2.25
IFT43-208ENST00000554423 PRO1854Q9UHT4 67 aa1.02□□□□□ -2.25
IFT43-208ENST00000554423 ERG28Q9UKR5 140 aa1.02□□□□□ -2.25
IFT43-208ENST00000554423 ICOSQ9Y6W8 199 aa1.02□□□□□ -2.25
IFT43-208ENST00000554423 CRYBG3Q68DQ2 2970 aa1.02□□□□□ -2.25
IFT43-208ENST00000554423 PIEZO1Q92508 2521 aa1.01□□□□□ -2.25
IFT43-208ENST00000554423 ZNF462Q96JM2 2506 aa1.01□□□□□ -2.25
IFT43-208ENST00000554423 USP24Q9UPU5 2620 aa1.01□□□□□ -2.25
IFT43-208ENST00000554423 POLQO75417 2590 aa1.01□□□□□ -2.25
IFT43-208ENST00000554423 USP9XQ93008 2570 aaPredicted RBP1.01□□□□□ -2.25
IFT43-208ENST00000554423 TRBV6-8A0A0A6YYG3 113 aa1.01□□□□□ -2.25
IFT43-208ENST00000554423 A0A0B4J2C4 111 aa1.01□□□□□ -2.25
IFT43-208ENST00000554423 TRBV10-2A0A0K0K1G8 114 aa1.01□□□□□ -2.25
IFT43-208ENST00000554423 LINC00959A0A1B0GUT2 108 aa1.01□□□□□ -2.25
IFT43-208ENST00000554423 J3QR89 54 aa1.01□□□□□ -2.25
IFT43-208ENST00000554423 NCR3O14931 201 aa1.01□□□□□ -2.25
IFT43-208ENST00000554423 SLC25A20O43772 301 aa1.01□□□□□ -2.25
IFT43-208ENST00000554423 CRPP02741 224 aa1.01□□□□□ -2.25
IFT43-208ENST00000554423 ANGP03950 147 aaKnown RBP1.01□□□□□ -2.25
IFT43-208ENST00000554423 CRYBA4P53673 196 aa1.01□□□□□ -2.25
IFT43-208ENST00000554423 SMAGPQ0VAQ4 97 aa1.01□□□□□ -2.25
IFT43-208ENST00000554423 CIRBPQ14011 172 aaKnown RBP1.01□□□□□ -2.25
IFT43-208ENST00000554423 SS18Q15532 418 aa1.01□□□□□ -2.25
IFT43-208ENST00000554423 ATXN8Q156A1 80 aa1.01□□□□□ -2.25
IFT43-208ENST00000554423 C2orf82Q6UX34 121 aa1.01□□□□□ -2.25
IFT43-208ENST00000554423 LINC00269Q8N2A0 174 aa1.01□□□□□ -2.25
IFT43-208ENST00000554423 OR13C6PQ8NH95 151 aa1.01□□□□□ -2.25
IFT43-208ENST00000554423 LINC00308Q8TCZ7 52 aa1.01□□□□□ -2.25
IFT43-208ENST00000554423 COX7B2Q8TF08 81 aa1.01□□□□□ -2.25
IFT43-208ENST00000554423 PPDPFLQ8WWR9 84 aa1.01□□□□□ -2.25
IFT43-208ENST00000554423 LINC00526Q96FQ7 95 aa1.01□□□□□ -2.25
IFT43-208ENST00000554423 CARD19Q96LW7 228 aa1.01□□□□□ -2.25
IFT43-208ENST00000554423 DOPEY1Q5JWR5 2465 aa1.01□□□□□ -2.25
IFT43-208ENST00000554423 SPG11Q96JI7 2443 aa1.01□□□□□ -2.25
IFT43-208ENST00000554423 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.01□□□□□ -2.25
IFT43-208ENST00000554423 DOPEY2Q9Y3R5 2298 aa1.01□□□□□ -2.25
IFT43-208ENST00000554423 CELSR2Q9HCU4 2923 aa1.01□□□□□ -2.25
IFT43-208ENST00000554423 CFAP46Q8IYW2 2715 aa1.01□□□□□ -2.25
IFT43-208ENST00000554423 CACNA1AO00555 2505 aa1□□□□□ -2.25
IFT43-208ENST00000554423 SPTAN1Q13813 2472 aaKnown RBP1□□□□□ -2.25
IFT43-208ENST00000554423 DNAH3Q8TD57 4116 aa1□□□□□ -2.25
IFT43-208ENST00000554423 UBR5O95071 2799 aaPredicted RBP1□□□□□ -2.25
IFT43-208ENST00000554423 ANKRD17O75179 2603 aaKnown RBP1□□□□□ -2.25
IFT43-208ENST00000554423 TRBV20-1A0A075B6N2 111 aa1□□□□□ -2.25
IFT43-208ENST00000554423 TRAV8-4A0A0B4J246 113 aa1□□□□□ -2.25
IFT43-208ENST00000554423 TEX49A0A1B0GTD5 131 aa1□□□□□ -2.25
IFT43-208ENST00000554423 LYRM9A8MSI8 78 aa1□□□□□ -2.25
IFT43-208ENST00000554423 COX7A2LO14548 114 aa1□□□□□ -2.25
IFT43-208ENST00000554423 TIMM17BO60830 172 aa1□□□□□ -2.25
IFT43-208ENST00000554423 MT-ATP8P03928 68 aa1□□□□□ -2.25
IFT43-208ENST00000554423 ATP5G1P05496 136 aa1□□□□□ -2.25
IFT43-208ENST00000554423 COX6CP09669 75 aa1□□□□□ -2.25
IFT43-208ENST00000554423 SPART-AS1P0CW21 52 aa1□□□□□ -2.25
IFT43-208ENST00000554423 IFITM1P13164 125 aa1□□□□□ -2.25
IFT43-208ENST00000554423 CCL18P55774 89 aa1□□□□□ -2.25
IFT43-208ENST00000554423 CKS1BP61024 79 aa1□□□□□ -2.25
IFT43-208ENST00000554423 PRR3P79522 188 aaKnown RBP1□□□□□ -2.25
IFT43-208ENST00000554423 SPAG11BQ08648 103 aa1□□□□□ -2.25
IFT43-208ENST00000554423 C9orf116Q5BN46 136 aaPredicted RBP1□□□□□ -2.25
IFT43-208ENST00000554423 C6orf226Q5I0X4 101 aa1□□□□□ -2.25
IFT43-208ENST00000554423 TTC32Q5I0X7 151 aa1□□□□□ -2.25
IFT43-208ENST00000554423 FAM19A3Q7Z5A8 133 aa1□□□□□ -2.25
IFT43-208ENST00000554423 TEN1Q86WV5 123 aa1□□□□□ -2.25
IFT43-208ENST00000554423 WFDC10BQ8IUB3 73 aa1□□□□□ -2.25
IFT43-208ENST00000554423 C3orf56Q8N813 242 aa1□□□□□ -2.25
IFT43-208ENST00000554423 Q8NAQ8 132 aa1□□□□□ -2.25
IFT43-208ENST00000554423 SMIM11BQ8TCY0 68 aa1□□□□□ -2.25
IFT43-208ENST00000554423 UBE2WQ96B02 151 aa1□□□□□ -2.25
IFT43-208ENST00000554423 SIGMAR1Q99720 223 aa1□□□□□ -2.25
IFT43-208ENST00000554423 SND1-IT1Q9HBX3 110 aa1□□□□□ -2.25
IFT43-208ENST00000554423 C8orf17Q9NRJ1 99 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms