RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 ALKQ9UM73 1620 aa0.58□□□□□ -2.32
SRP54-204ENST00000553923 CCL22O00626 93 aa0.58□□□□□ -2.32
SRP54-204ENST00000553923 HMGA1P17096 107 aaKnown RBP0.58□□□□□ -2.32
SRP54-204ENST00000553923 SPRR1BP22528 89 aa0.58□□□□□ -2.32
SRP54-204ENST00000553923 SPRR1AP35321 89 aa0.58□□□□□ -2.32
SRP54-204ENST00000553923 SPINK6Q6UWN8 80 aa0.58□□□□□ -2.32
SRP54-204ENST00000553923 ENHOQ6UWT2 76 aa0.58□□□□□ -2.32
SRP54-204ENST00000553923 DEFB105AQ8NG35 78 aa0.58□□□□□ -2.32
SRP54-204ENST00000553923 ERICH3Q5RHP9 1530 aa0.58□□□□□ -2.32
SRP54-204ENST00000553923 PKD1L3Q7Z443 1732 aa0.58□□□□□ -2.32
SRP54-204ENST00000553923 MYO5CQ9NQX4 1742 aa0.58□□□□□ -2.32
SRP54-204ENST00000553923 ROS1P08922 2347 aa0.58□□□□□ -2.32
SRP54-204ENST00000553923 ADAMTS12P58397 1594 aa0.57□□□□□ -2.32
SRP54-204ENST00000553923 CEP170BQ9Y4F5 1589 aaPredicted RBP0.57□□□□□ -2.32
SRP54-204ENST00000553923 RGPD2P0DJD1 1756 aa0.57□□□□□ -2.32
SRP54-204ENST00000553923 MEGF8Q7Z7M0 2845 aa0.57□□□□□ -2.32
SRP54-204ENST00000553923 PLXNB2O15031 1838 aa0.57□□□□□ -2.32
SRP54-204ENST00000553923 COL6A6A6NMZ7 2263 aa0.57□□□□□ -2.32
SRP54-204ENST00000553923 A0A087WWC5 75 aa0.57□□□□□ -2.32
SRP54-204ENST00000553923 KLK9Q2XQG4 91 aa0.57□□□□□ -2.32
SRP54-204ENST00000553923 LRRC37AA6NMS7 1700 aa0.57□□□□□ -2.32
SRP54-204ENST00000553923 AHNAKQ09666 5890 aaKnown RBP0.57□□□□□ -2.32
SRP54-204ENST00000553923 LMTK2Q8IWU2 1503 aa0.57□□□□□ -2.32
SRP54-204ENST00000553923 HFM1A2PYH4 1435 aa0.56□□□□□ -2.32
SRP54-204ENST00000553923 RGPD1P0DJD0 1748 aa0.56□□□□□ -2.32
SRP54-204ENST00000553923 ASXL1Q8IXJ9 1541 aa0.56□□□□□ -2.32
SRP54-204ENST00000553923 NDUFA3O95167 84 aa0.56□□□□□ -2.32
SRP54-204ENST00000553923 SFTA3P0C7M3 94 aa0.56□□□□□ -2.32
SRP54-204ENST00000553923 C3orf79P0CE67 100 aa0.56□□□□□ -2.32
SRP54-204ENST00000553923 DEFB109BQ30KR1 87 aa0.56□□□□□ -2.32
SRP54-204ENST00000553923 H1FX-AS1Q4G0G2 97 aa0.56□□□□□ -2.32
SRP54-204ENST00000553923 Q5VSD8 79 aa0.56□□□□□ -2.32
SRP54-204ENST00000553923 UBL5Q9BZL1 73 aa0.56□□□□□ -2.32
SRP54-204ENST00000553923 PPRC1Q5VV67 1664 aaKnown RBP0.56□□□□□ -2.32
SRP54-204ENST00000553923 ANKRD50Q9ULJ7 1429 aa0.55□□□□□ -2.32
SRP54-204ENST00000553923 SCN11AQ9UI33 1791 aa0.55□□□□□ -2.32
SRP54-204ENST00000553923 LCE6AA0A183 80 aa0.55□□□□□ -2.32
SRP54-204ENST00000553923 SPINK4O60575 86 aa0.55□□□□□ -2.32
SRP54-204ENST00000553923 SPINK1P00995 79 aa0.55□□□□□ -2.32
SRP54-204ENST00000553923 SMIM5Q71RC9 77 aa0.55□□□□□ -2.32
SRP54-204ENST00000553923 CDKN2A-AS1Q9UH64 79 aa0.55□□□□□ -2.32
SRP54-204ENST00000553923 MADDQ8WXG6 1647 aa0.55□□□□□ -2.32
SRP54-204ENST00000553923 ZNF831Q5JPB2 1677 aa0.55□□□□□ -2.32
SRP54-204ENST00000553923 ZDBF2Q9HCK1 2354 aa0.55□□□□□ -2.32
SRP54-204ENST00000553923 CD163L1Q9NR16 1453 aa0.54□□□□□ -2.32
SRP54-204ENST00000553923 UBR3Q6ZT12 1888 aa0.54□□□□□ -2.32
SRP54-204ENST00000553923 EFCAB5A4FU69 1503 aa0.54□□□□□ -2.32
SRP54-204ENST00000553923 MAGI3Q5TCQ9 1506 aa0.54□□□□□ -2.32
SRP54-204ENST00000553923 DIP2AQ14689 1571 aa0.54□□□□□ -2.32
SRP54-204ENST00000553923 JMJD1CQ15652 2540 aa0.54□□□□□ -2.32
SRP54-204ENST00000553923 LINC01549A6NIU2 74 aa0.54□□□□□ -2.32
SRP54-204ENST00000553923 LELP1Q5T871 98 aa0.54□□□□□ -2.32
SRP54-204ENST00000553923 FMN2Q9NZ56 1722 aa0.54□□□□□ -2.32
SRP54-204ENST00000553923 RGPD8O14715 1765 aaPredicted RBP0.54□□□□□ -2.32
SRP54-204ENST00000553923 LTN1O94822 1766 aa0.54□□□□□ -2.32
SRP54-204ENST00000553923 RGPD5Q99666 1765 aa0.54□□□□□ -2.32
SRP54-204ENST00000553923 DNAJC13O75165 2243 aa0.54□□□□□ -2.32
SRP54-204ENST00000553923 CDC42BPGQ6DT37 1551 aa0.53□□□□□ -2.32
SRP54-204ENST00000553923 MROH1Q8NDA8 1641 aa0.53□□□□□ -2.32
SRP54-204ENST00000553923 BIVM-ERCC5R4GMW8 1640 aa0.53□□□□□ -2.32
SRP54-204ENST00000553923 ASXL3Q9C0F0 2248 aa0.53□□□□□ -2.32
SRP54-204ENST00000553923 ZC3H13Q5T200 1668 aaKnown RBP0.53□□□□□ -2.32
SRP54-204ENST00000553923 KIF20BQ96Q89 1820 aa0.53□□□□□ -2.32
SRP54-204ENST00000553923 FCER1GP30273 86 aa0.53□□□□□ -2.32
SRP54-204ENST00000553923 WFDC13Q8IUB5 93 aa0.53□□□□□ -2.32
SRP54-204ENST00000553923 PRO3102Q9H379 93 aa0.53□□□□□ -2.32
SRP54-204ENST00000553923 RALGAPBQ86X10 1494 aa0.53□□□□□ -2.33
SRP54-204ENST00000553923 CADP27708 2225 aa0.52□□□□□ -2.33
SRP54-204ENST00000553923 MRPL33O75394 65 aaKnown RBP0.52□□□□□ -2.33
SRP54-204ENST00000553923 KNTC1P50748 2209 aa0.52□□□□□ -2.33
SRP54-204ENST00000553923 MACF1Q9UPN3 7388 aaKnown RBP0.52□□□□□ -2.33
SRP54-204ENST00000553923 LOC730098B7Z3J9 87 aa0.51□□□□□ -2.33
SRP54-204ENST00000553923 LINC00158P58513 81 aa0.51□□□□□ -2.33
SRP54-204ENST00000553923 COX6B2Q6YFQ2 88 aa0.51□□□□□ -2.33
SRP54-204ENST00000553923 KRTAP19-3Q7Z4W3 81 aa0.51□□□□□ -2.33
SRP54-204ENST00000553923 ABCA9Q8IUA7 1624 aa0.51□□□□□ -2.33
SRP54-204ENST00000553923 ARFGEF2Q9Y6D5 1785 aa0.5□□□□□ -2.33
SRP54-204ENST00000553923 POLR1AO95602 1720 aaPredicted RBP0.5□□□□□ -2.33
SRP54-204ENST00000553923 DOT1LQ8TEK3 1739 aa0.5□□□□□ -2.33
SRP54-204ENST00000553923 NWD1Q149M9 1564 aa0.5□□□□□ -2.33
SRP54-204ENST00000553923 INO80Q9ULG1 1556 aaPredicted RBP0.5□□□□□ -2.33
SRP54-204ENST00000553923 ETDCA0A1B0GVM5 59 aa0.5□□□□□ -2.33
SRP54-204ENST00000553923 COL14A1Q05707 1796 aaKnown RBP0.5□□□□□ -2.33
SRP54-204ENST00000553923 RICTORQ6R327 1708 aa0.5□□□□□ -2.33
SRP54-204ENST00000553923 CRIP1P50238 77 aa0.49□□□□□ -2.33
SRP54-204ENST00000553923 TIAM2Q8IVF5 1701 aa0.49□□□□□ -2.33
SRP54-204ENST00000553923 SYNE2Q8WXH0 6885 aaKnown RBP0.49□□□□□ -2.33
SRP54-204ENST00000553923 CFAP43Q8NDM7 1665 aa0.49□□□□□ -2.33
SRP54-204ENST00000553923 PREX1Q8TCU6 1659 aa0.49□□□□□ -2.33
SRP54-204ENST00000553923 ANKRD36A6QL64 1941 aa0.48□□□□□ -2.33
SRP54-204ENST00000553923 QSER1Q2KHR3 1735 aa0.48□□□□□ -2.33
SRP54-204ENST00000553923 DEFB131BA0A096LNP1 70 aa0.48□□□□□ -2.33
SRP54-204ENST00000553923 PRH1P02810 166 aa0.48□□□□□ -2.33
SRP54-204ENST00000553923 NCBP2-AS2Q69YL0 99 aa0.48□□□□□ -2.33
SRP54-204ENST00000553923 KCNQ1DNQ9H478 68 aa0.48□□□□□ -2.33
SRP54-204ENST00000553923 TENM3Q9P273 2699 aa0.47□□□□□ -2.33
SRP54-204ENST00000553923 KRTAP2-3P0C7H8 128 aa0.47□□□□□ -2.33
SRP54-204ENST00000553923 SMR3AQ99954 134 aa0.47□□□□□ -2.33
SRP54-204ENST00000553923 KRTAP2-4Q9BYR9 128 aa0.47□□□□□ -2.33
SRP54-204ENST00000553923 KRTAP2-1Q9BYU5 128 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms