RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 LYRM7Q5U5X0 104 aa8.56□□□□□ -1.04
VIPAS39-206ENST00000553888 TENM2Q9NT68 2774 aa8.55□□□□□ -1.04
VIPAS39-206ENST00000553888 RPL13AP40429 203 aaKnown RBP8.55□□□□□ -1.04
VIPAS39-206ENST00000553888 TCL1BO95988 128 aa8.54□□□□□ -1.04
VIPAS39-206ENST00000553888 Q9HAA7 133 aa8.54□□□□□ -1.04
VIPAS39-206ENST00000553888 SPAG11BQ08648 103 aa8.54□□□□□ -1.04
VIPAS39-206ENST00000553888 UNQ6190/PRO20217Q6UXQ8 127 aa8.54□□□□□ -1.04
VIPAS39-206ENST00000553888 DNAH10Q8IVF4 4471 aa8.54□□□□□ -1.04
VIPAS39-206ENST00000553888 TRIAP1O43715 76 aa8.53□□□□□ -1.04
VIPAS39-206ENST00000553888 SCGB1C2P0DMR2 95 aa8.53□□□□□ -1.04
VIPAS39-206ENST00000553888 CCL18P55774 89 aa8.53□□□□□ -1.04
VIPAS39-206ENST00000553888 KRTAP26-1Q6PEX3 210 aa8.53□□□□□ -1.04
VIPAS39-206ENST00000553888 MEGF8Q7Z7M0 2845 aa8.53□□□□□ -1.04
VIPAS39-206ENST00000553888 PLECQ15149 4684 aaKnown RBP8.53□□□□□ -1.04
VIPAS39-206ENST00000553888 IBA57-AS1B1ANH7 110 aa8.53□□□□□ -1.04
VIPAS39-206ENST00000553888 F8W1H4 67 aa8.53□□□□□ -1.04
VIPAS39-206ENST00000553888 HIGD2BQ4VC39 106 aa8.53□□□□□ -1.04
VIPAS39-206ENST00000553888 B9D2Q9BPU9 175 aa8.53□□□□□ -1.04
VIPAS39-206ENST00000553888 LINC01556Q5JQF7 62 aa8.53□□□□□ -1.04
VIPAS39-206ENST00000553888 C15orf53Q8NAA6 179 aa8.52□□□□□ -1.05
VIPAS39-206ENST00000553888 DYNC2H1Q8NCM8 4307 aaKnown RBP8.51□□□□□ -1.05
VIPAS39-206ENST00000553888 C9orf153Q5TBE3 101 aa8.51□□□□□ -1.05
VIPAS39-206ENST00000553888 SND1-IT1Q9HBX3 110 aa8.51□□□□□ -1.05
VIPAS39-206ENST00000553888 IGKV2-28A0A075B6P5 120 aa8.51□□□□□ -1.05
VIPAS39-206ENST00000553888 IGKV2D-24A0A075B6R9 120 aa8.51□□□□□ -1.05
VIPAS39-206ENST00000553888 IGKV2D-28P01615 120 aa8.51□□□□□ -1.05
VIPAS39-206ENST00000553888 TRAV8-4A0A0B4J246 113 aa8.5□□□□□ -1.05
VIPAS39-206ENST00000553888 LINC00337Q8N6G1 96 aa8.5□□□□□ -1.05
VIPAS39-206ENST00000553888 PRR3P79522 188 aaKnown RBP8.5□□□□□ -1.05
VIPAS39-206ENST00000553888 PRO0461Q9UI25 63 aa8.5□□□□□ -1.05
VIPAS39-206ENST00000553888 DNAH10OSP0CZ25 163 aa8.49□□□□□ -1.05
VIPAS39-206ENST00000553888 CLEC2BQ92478 149 aa8.49□□□□□ -1.05
VIPAS39-206ENST00000553888 STARD9Q9P2P6 4700 aa8.49□□□□□ -1.05
VIPAS39-206ENST00000553888 CASC10Q5T4H9 136 aa8.48□□□□□ -1.05
VIPAS39-206ENST00000553888 C15orf56Q8N910 161 aa8.48□□□□□ -1.05
VIPAS39-206ENST00000553888 SNCGO76070 127 aa8.48□□□□□ -1.05
VIPAS39-206ENST00000553888 SMCPP49901 116 aaPredicted RBP8.48□□□□□ -1.05
VIPAS39-206ENST00000553888 Q8NDZ9 215 aa8.48□□□□□ -1.05
VIPAS39-206ENST00000553888 TRBV30A0A0K0K1B3 111 aa8.47□□□□□ -1.05
VIPAS39-206ENST00000553888 CXCL5P42830 114 aa8.47□□□□□ -1.05
VIPAS39-206ENST00000553888 COPS9Q8WXC6 57 aa8.47□□□□□ -1.05
VIPAS39-206ENST00000553888 C6orf48Q9UBA6 75 aa8.47□□□□□ -1.05
VIPAS39-206ENST00000553888 CD164Q04900 197 aa8.46□□□□□ -1.06
VIPAS39-206ENST00000553888 NTN5Q8WTR8 489 aaPredicted RBP8.46□□□□□ -1.06
VIPAS39-206ENST00000553888 PMAIP1Q13794 54 aa8.43□□□□□ -1.06
VIPAS39-206ENST00000553888 Q6ZRU5 148 aa8.43□□□□□ -1.06
VIPAS39-206ENST00000553888 KRTAP1-5Q9BYS1 174 aa8.43□□□□□ -1.06
VIPAS39-206ENST00000553888 DPH3Q96FX2 82 aa8.43□□□□□ -1.06
VIPAS39-206ENST00000553888 CAMK2N2Q96S95 79 aa8.43□□□□□ -1.06
VIPAS39-206ENST00000553888 LECT2O14960 151 aa8.43□□□□□ -1.06
VIPAS39-206ENST00000553888 XAGE1AQ9HD64 81 aa8.43□□□□□ -1.06
VIPAS39-206ENST00000553888 APLNQ9ULZ1 77 aa8.43□□□□□ -1.06
VIPAS39-206ENST00000553888 COX17Q14061 63 aa8.42□□□□□ -1.06
VIPAS39-206ENST00000553888 BRK1Q8WUW1 75 aa8.42□□□□□ -1.06
VIPAS39-206ENST00000553888 DSCR8Q96T75 97 aa8.42□□□□□ -1.06
VIPAS39-206ENST00000553888 NCR3O14931 201 aa8.42□□□□□ -1.06
VIPAS39-206ENST00000553888 SMIM11BQ8TCY0 68 aa8.41□□□□□ -1.06
VIPAS39-206ENST00000553888 TRAV13-2A0A0B4J235 113 aa8.41□□□□□ -1.06
VIPAS39-206ENST00000553888 ATXN8Q156A1 80 aa8.41□□□□□ -1.06
VIPAS39-206ENST00000553888 FAM218AQ96MZ4 157 aa8.4□□□□□ -1.06
VIPAS39-206ENST00000553888 COX6CP09669 75 aa8.4□□□□□ -1.06
VIPAS39-206ENST00000553888 UPK3BQ9BT76 320 aa8.4□□□□□ -1.06
VIPAS39-206ENST00000553888 GAGE2AQ6NT46 116 aa8.4□□□□□ -1.07
VIPAS39-206ENST00000553888 UBE2DNLQ8IWF7 75 aa8.39□□□□□ -1.07
VIPAS39-206ENST00000553888 SLC25A20O43772 301 aa8.39□□□□□ -1.07
VIPAS39-206ENST00000553888 Q6Q795 121 aa8.38□□□□□ -1.07
VIPAS39-206ENST00000553888 GVQW2A0A096LPI5 108 aaPredicted RBP8.38□□□□□ -1.07
VIPAS39-206ENST00000553888 LST1O00453 97 aa8.38□□□□□ -1.07
VIPAS39-206ENST00000553888 SLPIP03973 132 aa8.38□□□□□ -1.07
VIPAS39-206ENST00000553888 C3orf22Q8N5N4 141 aa8.38□□□□□ -1.07
VIPAS39-206ENST00000553888 USP17L23D6RBM5 183 aa8.37□□□□□ -1.07
VIPAS39-206ENST00000553888 RPL28P46779 137 aaKnown RBP8.37□□□□□ -1.07
VIPAS39-206ENST00000553888 PRR26Q8N8Z3 221 aa8.37□□□□□ -1.07
VIPAS39-206ENST00000553888 TGP01266 2768 aa8.37□□□□□ -1.07
VIPAS39-206ENST00000553888 ANKRD29Q8N6D5 301 aa8.36□□□□□ -1.07
VIPAS39-206ENST00000553888 FBN3Q75N90 2809 aa8.36□□□□□ -1.07
VIPAS39-206ENST00000553888 VPS13DQ5THJ4 4388 aa8.35□□□□□ -1.07
VIPAS39-206ENST00000553888 RPL18AQ02543 176 aaKnown RBP8.35□□□□□ -1.07
VIPAS39-206ENST00000553888 SYCNQ0VAF6 134 aa8.35□□□□□ -1.07
VIPAS39-206ENST00000553888 SERTAD4-AS1Q5TG53 156 aa8.35□□□□□ -1.07
VIPAS39-206ENST00000553888 Q6ZRP5 223 aa8.35□□□□□ -1.07
VIPAS39-206ENST00000553888 A0A087WYN8 130 aa8.34□□□□□ -1.07
VIPAS39-206ENST00000553888 NDUFC2O95298 119 aa8.34□□□□□ -1.07
VIPAS39-206ENST00000553888 MRPL55Q7Z7F7 128 aaKnown RBP8.33□□□□□ -1.08
VIPAS39-206ENST00000553888 KMT2AQ03164 3969 aa8.33□□□□□ -1.08
VIPAS39-206ENST00000553888 TRBV10-2A0A0K0K1G8 114 aa8.33□□□□□ -1.08
VIPAS39-206ENST00000553888 UQCRQO14949 82 aa8.33□□□□□ -1.08
VIPAS39-206ENST00000553888 VPREB1P12018 145 aa8.33□□□□□ -1.08
VIPAS39-206ENST00000553888 PPDPFLQ8WWR9 84 aa8.33□□□□□ -1.08
VIPAS39-206ENST00000553888 NDUFC2-KCTD14E9PQ53 114 aa8.32□□□□□ -1.08
VIPAS39-206ENST00000553888 NUPR2A6NF83 97 aa8.32□□□□□ -1.08
VIPAS39-206ENST00000553888 TEN1Q86WV5 123 aa8.32□□□□□ -1.08
VIPAS39-206ENST00000553888 S100A7L2Q5SY68 101 aa8.31□□□□□ -1.08
VIPAS39-206ENST00000553888 C9orf129Q5T035 196 aaKnown RBP8.3□□□□□ -1.08
VIPAS39-206ENST00000553888 RMI2Q96E14 147 aa8.3□□□□□ -1.08
VIPAS39-206ENST00000553888 TEX49A0A1B0GTD5 131 aa8.3□□□□□ -1.08
VIPAS39-206ENST00000553888 TRBV10-3A0A0K0K1G6 114 aa8.29□□□□□ -1.08
VIPAS39-206ENST00000553888 C6orf99Q4VX62 202 aa8.29□□□□□ -1.08
VIPAS39-206ENST00000553888 hADV29S1A0JD25 119 aa8.29□□□□□ -1.08
VIPAS39-206ENST00000553888 M0R2N4 97 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms