RNA–Protein interactions for RNA: ENST00000549549.1

PRIM1-204, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-204ENST00000549549 IQCF6A8MYZ5 107 aa0.57□□□□□ -2.32
PRIM1-204ENST00000549549 SNRPFP62306 86 aaKnown RBP0.57□□□□□ -2.32
PRIM1-204ENST00000549549 MUC5BQ9HC84 5762 aaPredicted RBP0.57□□□□□ -2.32
PRIM1-204ENST00000549549 TENM4Q6N022 2769 aa0.57□□□□□ -2.32
PRIM1-204ENST00000549549 MAP3K4Q9Y6R4 1608 aa0.56□□□□□ -2.32
PRIM1-204ENST00000549549 PLGLAQ15195 96 aa0.56□□□□□ -2.32
PRIM1-204ENST00000549549 UACAQ9BZF9 1416 aa0.55□□□□□ -2.32
PRIM1-204ENST00000549549 VWFP04275 2813 aa0.55□□□□□ -2.32
PRIM1-204ENST00000549549 DEFB105AQ8NG35 78 aa0.54□□□□□ -2.32
PRIM1-204ENST00000549549 TMEM131LA2VDJ0 1609 aa0.53□□□□□ -2.32
PRIM1-204ENST00000549549 HIVEP3Q5T1R4 2406 aa0.53□□□□□ -2.32
PRIM1-204ENST00000549549 CPSF4LA6NMK7 179 aaKnown RBP0.53□□□□□ -2.32
PRIM1-204ENST00000549549 SPTBN1Q01082 2364 aaKnown RBP0.53□□□□□ -2.33
PRIM1-204ENST00000549549 I3L3M4 83 aa0.52□□□□□ -2.33
PRIM1-204ENST00000549549 DEFB112Q30KQ8 113 aa0.52□□□□□ -2.33
PRIM1-204ENST00000549549 TDRG1Q3Y452 100 aa0.52□□□□□ -2.33
PRIM1-204ENST00000549549 CELSR1Q9NYQ6 3014 aa0.52□□□□□ -2.33
PRIM1-204ENST00000549549 MYMXA0A1B0GTQ4 84 aa0.51□□□□□ -2.33
PRIM1-204ENST00000549549 LINC00643Q86TS7 51 aa0.51□□□□□ -2.33
PRIM1-204ENST00000549549 URB1O60287 2271 aaKnown RBP0.49□□□□□ -2.33
PRIM1-204ENST00000549549 A0A1B0GUT8 65 aa0.49□□□□□ -2.33
PRIM1-204ENST00000549549 GVINP1Q7Z2Y8 2422 aa0.49□□□□□ -2.33
PRIM1-204ENST00000549549 MAGI2Q86UL8 1455 aa0.48□□□□□ -2.33
PRIM1-204ENST00000549549 KIF20BQ96Q89 1820 aa0.48□□□□□ -2.33
PRIM1-204ENST00000549549 SPTY2D1-AS1A0A0U1RR47 76 aa0.48□□□□□ -2.33
PRIM1-204ENST00000549549 SPINK4O60575 86 aa0.48□□□□□ -2.33
PRIM1-204ENST00000549549 FXYD6Q9H0Q3 95 aa0.48□□□□□ -2.33
PRIM1-204ENST00000549549 CHD6Q8TD26 2715 aa0.48□□□□□ -2.33
PRIM1-204ENST00000549549 IGSF10Q6WRI0 2623 aa0.48□□□□□ -2.33
PRIM1-204ENST00000549549 LRRC9Q6ZRR7 1453 aa0.47□□□□□ -2.33
PRIM1-204ENST00000549549 LRRC7Q96NW7 1537 aa0.45□□□□□ -2.34
PRIM1-204ENST00000549549 QSER1Q2KHR3 1735 aa0.45□□□□□ -2.34
PRIM1-204ENST00000549549 KLK9Q2XQG4 91 aa0.45□□□□□ -2.34
PRIM1-204ENST00000549549 RGPD1P0DJD0 1748 aa0.44□□□□□ -2.34
PRIM1-204ENST00000549549 NCOR1O75376 2440 aa0.44□□□□□ -2.34
PRIM1-204ENST00000549549 APLNQ9ULZ1 77 aa0.44□□□□□ -2.34
PRIM1-204ENST00000549549 ACYP1P07311 99 aa0.43□□□□□ -2.34
PRIM1-204ENST00000549549 MRPL34Q9BQ48 92 aaKnown RBP0.43□□□□□ -2.34
PRIM1-204ENST00000549549 AHNAKQ09666 5890 aaKnown RBP0.43□□□□□ -2.34
PRIM1-204ENST00000549549 WNK2Q9Y3S1 2297 aa0.41□□□□□ -2.34
PRIM1-204ENST00000549549 COL14A1Q05707 1796 aaKnown RBP0.41□□□□□ -2.34
PRIM1-204ENST00000549549 HUWE1Q7Z6Z7 4374 aaKnown RBP0.41□□□□□ -2.34
PRIM1-204ENST00000549549 TNXBP22105 4242 aa0.4□□□□□ -2.35
PRIM1-204ENST00000549549 UBR5O95071 2799 aaPredicted RBP0.4□□□□□ -2.35
PRIM1-204ENST00000549549 RGPD2P0DJD1 1756 aa0.4□□□□□ -2.35
PRIM1-204ENST00000549549 PRM1P04553 51 aa0.39□□□□□ -2.35
PRIM1-204ENST00000549549 COX7BP24311 80 aa0.39□□□□□ -2.35
PRIM1-204ENST00000549549 CCDC18Q5T9S5 1454 aa0.39□□□□□ -2.35
PRIM1-204ENST00000549549 CLIP1P30622 1438 aa0.37□□□□□ -2.35
PRIM1-204ENST00000549549 CEBPZOSA8MTT3 80 aa0.36□□□□□ -2.35
PRIM1-204ENST00000549549 CACNA1AO00555 2505 aa0.36□□□□□ -2.35
PRIM1-204ENST00000549549 CCL22O00626 93 aa0.35□□□□□ -2.35
PRIM1-204ENST00000549549 ABCA2Q9BZC7 2435 aa0.35□□□□□ -2.35
PRIM1-204ENST00000549549 PTPN13Q12923 2485 aa0.34□□□□□ -2.36
PRIM1-204ENST00000549549 H1FX-AS1Q4G0G2 97 aa0.34□□□□□ -2.36
PRIM1-204ENST00000549549 KANTRA0A1W2PQU2 76 aa0.33□□□□□ -2.36
PRIM1-204ENST00000549549 SUPT6HQ7KZ85 1726 aaKnown RBP0.32□□□□□ -2.36
PRIM1-204ENST00000549549 PKD1L1Q8TDX9 2849 aa0.32□□□□□ -2.36
PRIM1-204ENST00000549549 USP32Q8NFA0 1604 aa0.31□□□□□ -2.36
PRIM1-204ENST00000549549 GAFA1Q96PS6 74 aa0.31□□□□□ -2.36
PRIM1-204ENST00000549549 MYCBP2O75592 4640 aa0.31□□□□□ -2.36
PRIM1-204ENST00000549549 DIP2BQ9P265 1576 aa0.3□□□□□ -2.36
PRIM1-204ENST00000549549 BCORQ6W2J9 1755 aa0.29□□□□□ -2.36
PRIM1-204ENST00000549549 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.29□□□□□ -2.36
PRIM1-204ENST00000549549 KMT2AQ03164 3969 aa0.29□□□□□ -2.36
PRIM1-204ENST00000549549 MDN1Q9NU22 5596 aa0.29□□□□□ -2.36
PRIM1-204ENST00000549549 TRAV21A0A0B4J279 112 aa0.29□□□□□ -2.36
PRIM1-204ENST00000549549 PREX1Q8TCU6 1659 aa0.29□□□□□ -2.36
PRIM1-204ENST00000549549 FAT2Q9NYQ8 4349 aa0.29□□□□□ -2.36
PRIM1-204ENST00000549549 MUC5ACP98088 5654 aa0.28□□□□□ -2.36
PRIM1-204ENST00000549549 SPRR2DP22532 72 aa0.28□□□□□ -2.36
PRIM1-204ENST00000549549 UBR3Q6ZT12 1888 aa0.27□□□□□ -2.37
PRIM1-204ENST00000549549 ST20Q9HBF5 79 aa0.27□□□□□ -2.37
PRIM1-204ENST00000549549 ARHGAP35Q9NRY4 1499 aa0.27□□□□□ -2.37
PRIM1-204ENST00000549549 KMT2DO14686 5537 aa0.26□□□□□ -2.37
PRIM1-204ENST00000549549 POLR1AO95602 1720 aaPredicted RBP0.25□□□□□ -2.37
PRIM1-204ENST00000549549 S100A13Q99584 98 aa0.25□□□□□ -2.37
PRIM1-204ENST00000549549 DMBT1Q9UGM3 2413 aaPredicted RBP0.25□□□□□ -2.37
PRIM1-204ENST00000549549 SCRIBQ14160 1630 aa0.24□□□□□ -2.37
PRIM1-204ENST00000549549 CEP170BQ9Y4F5 1589 aaPredicted RBP0.24□□□□□ -2.37
PRIM1-204ENST00000549549 URB2Q14146 1524 aaKnown RBP0.24□□□□□ -2.37
PRIM1-204ENST00000549549 COL7A1Q02388 2944 aa0.24□□□□□ -2.37
PRIM1-204ENST00000549549 DCAF1Q9Y4B6 1507 aa0.23□□□□□ -2.37
PRIM1-204ENST00000549549 ERVK-7P63135 1459 aa0.23□□□□□ -2.37
PRIM1-204ENST00000549549 ATRQ13535 2644 aa0.23□□□□□ -2.37
PRIM1-204ENST00000549549 LPAP08519 4548 aa0.23□□□□□ -2.37
PRIM1-204ENST00000549549 ZNF831Q5JPB2 1677 aa0.22□□□□□ -2.37
PRIM1-204ENST00000549549 ADIRFQ15847 76 aa0.22□□□□□ -2.37
PRIM1-204ENST00000549549 RPL38P63173 70 aaKnown RBP0.21□□□□□ -2.38
PRIM1-204ENST00000549549 LELP1Q5T871 98 aa0.21□□□□□ -2.38
PRIM1-204ENST00000549549 CSPG4Q6UVK1 2322 aa0.21□□□□□ -2.38
PRIM1-204ENST00000549549 LTN1O94822 1766 aa0.19□□□□□ -2.38
PRIM1-204ENST00000549549 LOC730098B7Z3J9 87 aa0.19□□□□□ -2.38
PRIM1-204ENST00000549549 NDUFB1O75438 58 aa0.19□□□□□ -2.38
PRIM1-204ENST00000549549 NCOA2Q15596 1464 aa0.18□□□□□ -2.38
PRIM1-204ENST00000549549 WFDC9Q8NEX5 89 aa0.18□□□□□ -2.38
PRIM1-204ENST00000549549 MAGI3Q5TCQ9 1506 aa0.18□□□□□ -2.38
PRIM1-204ENST00000549549 RGPD8O14715 1765 aaPredicted RBP0.17□□□□□ -2.38
PRIM1-204ENST00000549549 RGPD5Q99666 1765 aa0.17□□□□□ -2.38
PRIM1-204ENST00000549549 HEPN1Q6WQI6 88 aa0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms