RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 TRBV30A0A0K0K1B3 111 aa5.26□□□□□ -1.57
DEPDC4-207ENST00000549249 F8WDY8 70 aa5.26□□□□□ -1.57
DEPDC4-207ENST00000549249 PFN2P35080 140 aa5.26□□□□□ -1.57
DEPDC4-207ENST00000549249 FXYD2P54710 66 aa5.26□□□□□ -1.57
DEPDC4-207ENST00000549249 SYCNQ0VAF6 134 aa5.26□□□□□ -1.57
DEPDC4-207ENST00000549249 TAL2Q16559 108 aa5.26□□□□□ -1.57
DEPDC4-207ENST00000549249 BVES-AS1Q5T3Y7 98 aa5.26□□□□□ -1.57
DEPDC4-207ENST00000549249 C1orf134Q5TEV5 83 aa5.26□□□□□ -1.57
DEPDC4-207ENST00000549249 CEND1Q8N111 149 aa5.26□□□□□ -1.57
DEPDC4-207ENST00000549249 MIR7-3HGQ8N6C7 128 aa5.26□□□□□ -1.57
DEPDC4-207ENST00000549249 SNHG12Q9BXW3 62 aa5.26□□□□□ -1.57
DEPDC4-207ENST00000549249 RTL8CO15255 209 aa5.25□□□□□ -1.57
DEPDC4-207ENST00000549249 GCSHP23434 173 aa5.25□□□□□ -1.57
DEPDC4-207ENST00000549249 LINC00158P58513 81 aa5.25□□□□□ -1.57
DEPDC4-207ENST00000549249 NPC2P61916 151 aa5.25□□□□□ -1.57
DEPDC4-207ENST00000549249 SRSF9Q13242 221 aaKnown RBP eCLIP5.25□□□□□ -1.57
DEPDC4-207ENST00000549249 MUSTN1Q8IVN3 82 aa5.25□□□□□ -1.57
DEPDC4-207ENST00000549249 CARD19Q96LW7 228 aa5.25□□□□□ -1.57
DEPDC4-207ENST00000549249 KRTAP9-8Q9BYQ0 159 aa5.25□□□□□ -1.57
DEPDC4-207ENST00000549249 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.24□□□□□ -1.57
DEPDC4-207ENST00000549249 A0A087WTM6 91 aa5.24□□□□□ -1.57
DEPDC4-207ENST00000549249 PTTG1IPP53801 180 aa5.24□□□□□ -1.57
DEPDC4-207ENST00000549249 CIRBPQ14011 172 aaKnown RBP5.24□□□□□ -1.57
DEPDC4-207ENST00000549249 COX17Q14061 63 aa5.24□□□□□ -1.57
DEPDC4-207ENST00000549249 RNF151Q2KHN1 245 aa5.24□□□□□ -1.57
DEPDC4-207ENST00000549249 C14orf177Q52M58 125 aa5.24□□□□□ -1.57
DEPDC4-207ENST00000549249 Q6ZVH6 145 aa5.24□□□□□ -1.57
DEPDC4-207ENST00000549249 LINC00308Q8TCZ7 52 aa5.24□□□□□ -1.57
DEPDC4-207ENST00000549249 M0R143 59 aa5.23□□□□□ -1.57
DEPDC4-207ENST00000549249 IFITM1P13164 125 aa5.23□□□□□ -1.57
DEPDC4-207ENST00000549249 CNBPP62633 177 aaKnown RBP5.23□□□□□ -1.57
DEPDC4-207ENST00000549249 BATFQ16520 125 aa5.23□□□□□ -1.57
DEPDC4-207ENST00000549249 Q8N814 137 aa5.23□□□□□ -1.57
DEPDC4-207ENST00000549249 LOC107984156A0A0G2JMH3 177 aa5.22□□□□□ -1.57
DEPDC4-207ENST00000549249 A4D1N5 150 aa5.22□□□□□ -1.57
DEPDC4-207ENST00000549249 TLX1NBP0CAT3 122 aa5.22□□□□□ -1.57
DEPDC4-207ENST00000549249 FUSP35637 526 aaKnown RBP eCLIP5.22□□□□□ -1.57
DEPDC4-207ENST00000549249 Q6ZRP5 223 aa5.22□□□□□ -1.57
DEPDC4-207ENST00000549249 ARL17AQ8IVW1 177 aa5.22□□□□□ -1.57
DEPDC4-207ENST00000549249 Q8NDZ9 215 aa5.22□□□□□ -1.57
DEPDC4-207ENST00000549249 PPDPFQ9H3Y8 114 aa5.22□□□□□ -1.57
DEPDC4-207ENST00000549249 SND1-IT1Q9HBX3 110 aa5.22□□□□□ -1.57
DEPDC4-207ENST00000549249 NDUFC2-KCTD14E9PQ53 114 aa5.21□□□□□ -1.58
DEPDC4-207ENST00000549249 DNAH2Q9P225 4427 aa5.21□□□□□ -1.58
DEPDC4-207ENST00000549249 A0A1B0GWB2 263 aa5.2□□□□□ -1.58
DEPDC4-207ENST00000549249 K7ERJ3 54 aa5.2□□□□□ -1.58
DEPDC4-207ENST00000549249 CFC1BP0CG36 223 aa5.2□□□□□ -1.58
DEPDC4-207ENST00000549249 CFC1P0CG37 223 aa5.2□□□□□ -1.58
DEPDC4-207ENST00000549249 RPL24P83731 157 aaKnown RBP5.2□□□□□ -1.58
DEPDC4-207ENST00000549249 C21orf62-AS1Q17RA5 79 aa5.2□□□□□ -1.58
DEPDC4-207ENST00000549249 XAGE1AQ9HD64 81 aa5.2□□□□□ -1.58
DEPDC4-207ENST00000549249 NHP2Q9NX24 153 aaKnown RBP5.2□□□□□ -1.58
DEPDC4-207ENST00000549249 DNAH17Q9UFH2 4485 aa5.19□□□□□ -1.58
DEPDC4-207ENST00000549249 IGKV2-28A0A075B6P5 120 aa5.19□□□□□ -1.58
DEPDC4-207ENST00000549249 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.19□□□□□ -1.58
DEPDC4-207ENST00000549249 LOC107984640A0A0U1RRK4 108 aa5.19□□□□□ -1.58
DEPDC4-207ENST00000549249 IGKV2D-28P01615 120 aa5.19□□□□□ -1.58
DEPDC4-207ENST00000549249 RPL18AQ02543 176 aaKnown RBP5.19□□□□□ -1.58
DEPDC4-207ENST00000549249 LINC01620Q4KN68 170 aa5.19□□□□□ -1.58
DEPDC4-207ENST00000549249 GAGE2EQ4V326 116 aa5.19□□□□□ -1.58
DEPDC4-207ENST00000549249 C9orf129Q5T035 196 aaKnown RBP5.19□□□□□ -1.58
DEPDC4-207ENST00000549249 LINC00336Q6ZUF6 198 aa5.19□□□□□ -1.58
DEPDC4-207ENST00000549249 C9orf163Q8N9P6 203 aa5.19□□□□□ -1.58
DEPDC4-207ENST00000549249 GAGE2DQ9UEU5 116 aa5.19□□□□□ -1.58
DEPDC4-207ENST00000549249 A0A096LNI7 61 aa5.18□□□□□ -1.58
DEPDC4-207ENST00000549249 A0A0B4J2C4 111 aa5.18□□□□□ -1.58
DEPDC4-207ENST00000549249 A6NDN8 102 aa5.17□□□□□ -1.58
DEPDC4-207ENST00000549249 TAX1BP3O14907 124 aa5.17□□□□□ -1.58
DEPDC4-207ENST00000549249 VPREB1P12018 145 aa5.17□□□□□ -1.58
DEPDC4-207ENST00000549249 PRR3P79522 188 aaKnown RBP5.17□□□□□ -1.58
DEPDC4-207ENST00000549249 GAGE2BQ13066 116 aa5.17□□□□□ -1.58
DEPDC4-207ENST00000549249 SDIM1Q6ZPB5 146 aa5.17□□□□□ -1.58
DEPDC4-207ENST00000549249 KRTAP7-1Q8IUC3 87 aa5.17□□□□□ -1.58
DEPDC4-207ENST00000549249 LINC00337Q8N6G1 96 aa5.17□□□□□ -1.58
DEPDC4-207ENST00000549249 COPS9Q8WXC6 57 aa5.17□□□□□ -1.58
DEPDC4-207ENST00000549249 HECTD4Q9Y4D8 3996 aa5.17□□□□□ -1.58
DEPDC4-207ENST00000549249 HERC2O95714 4834 aa5.16□□□□□ -1.58
DEPDC4-207ENST00000549249 NDUFC2O95298 119 aa5.16□□□□□ -1.58
DEPDC4-207ENST00000549249 CHTF8P0CG12 524 aa5.16□□□□□ -1.58
DEPDC4-207ENST00000549249 COL5A1-AS1Q5SY13 56 aa5.16□□□□□ -1.58
DEPDC4-207ENST00000549249 SERTAD4-AS1Q5TG53 156 aa5.16□□□□□ -1.58
DEPDC4-207ENST00000549249 RAB37Q96AX2 223 aa5.16□□□□□ -1.58
DEPDC4-207ENST00000549249 FAM168BA1KXE4 195 aa5.15□□□□□ -1.59
DEPDC4-207ENST00000549249 C16orf90A8MZG2 172 aa5.15□□□□□ -1.59
DEPDC4-207ENST00000549249 PANO1I0J062 215 aa5.15□□□□□ -1.59
DEPDC4-207ENST00000549249 NCR3O14931 201 aa5.15□□□□□ -1.59
DEPDC4-207ENST00000549249 NAA38Q9BRA0 125 aaKnown RBP5.15□□□□□ -1.59
DEPDC4-207ENST00000549249 FAT2Q9NYQ8 4349 aa5.15□□□□□ -1.59
DEPDC4-207ENST00000549249 IGLV5-52A0A0A0MRZ9 124 aa5.14□□□□□ -1.59
DEPDC4-207ENST00000549249 IGKV2-24A0A0C4DH68 120 aa5.14□□□□□ -1.59
DEPDC4-207ENST00000549249 TSPAN13O95857 204 aa5.14□□□□□ -1.59
DEPDC4-207ENST00000549249 RPL13AP40429 203 aaKnown RBP5.14□□□□□ -1.59
DEPDC4-207ENST00000549249 PRO1854Q9UHT4 67 aa5.14□□□□□ -1.59
DEPDC4-207ENST00000549249 IGLV5-37A0A075B6J1 123 aa5.13□□□□□ -1.59
DEPDC4-207ENST00000549249 A0A1W2PNN7 141 aa5.13□□□□□ -1.59
DEPDC4-207ENST00000549249 LBHQ53QV2 105 aaPredicted RBP5.13□□□□□ -1.59
DEPDC4-207ENST00000549249 DNAH11Q96DT5 4516 aa5.12□□□□□ -1.59
DEPDC4-207ENST00000549249 TRAV13-2A0A0B4J235 113 aa5.12□□□□□ -1.59
DEPDC4-207ENST00000549249 TRBV10-2A0A0K0K1G8 114 aa5.12□□□□□ -1.59
DEPDC4-207ENST00000549249 A0A1B0GVY2 172 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms