RNA–Protein interactions for RNA: ENST00000549021.5

TGFBR1-206, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2

Gene TGFBR1, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-206ENST00000549021 SMIM29Q86T20 159 aa4.35□□□□□ -1.71
TGFBR1-206ENST00000549021 UBE2DNLQ8IWF7 75 aa4.35□□□□□ -1.71
TGFBR1-206ENST00000549021 RMI2Q96E14 147 aa4.35□□□□□ -1.71
TGFBR1-206ENST00000549021 PPDPFQ9H3Y8 114 aa4.35□□□□□ -1.71
TGFBR1-206ENST00000549021 NHP2Q9NX24 153 aaKnown RBP4.35□□□□□ -1.71
TGFBR1-206ENST00000549021 DNHD1Q96M86 4753 aa4.35□□□□□ -1.71
TGFBR1-206ENST00000549021 IGKV2D-24A0A075B6R9 120 aa4.34□□□□□ -1.71
TGFBR1-206ENST00000549021 A0A1B0GV90 55 aa4.34□□□□□ -1.71
TGFBR1-206ENST00000549021 SPAG11BQ08648 103 aa4.34□□□□□ -1.71
TGFBR1-206ENST00000549021 COX17Q14061 63 aa4.34□□□□□ -1.71
TGFBR1-206ENST00000549021 C2orf82Q6UX34 121 aa4.34□□□□□ -1.71
TGFBR1-206ENST00000549021 C15orf56Q8N910 161 aa4.34□□□□□ -1.71
TGFBR1-206ENST00000549021 LINC00308Q8TCZ7 52 aa4.34□□□□□ -1.71
TGFBR1-206ENST00000549021 COPS9Q8WXC6 57 aa4.34□□□□□ -1.71
TGFBR1-206ENST00000549021 KRTAP9-8Q9BYQ0 159 aa4.34□□□□□ -1.71
TGFBR1-206ENST00000549021 Q9HAA7 133 aa4.34□□□□□ -1.71
TGFBR1-206ENST00000549021 ERG28Q9UKR5 140 aa4.34□□□□□ -1.71
TGFBR1-206ENST00000549021 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.33□□□□□ -1.72
TGFBR1-206ENST00000549021 A0A0U1RRA0 63 aa4.33□□□□□ -1.72
TGFBR1-206ENST00000549021 F8WDY8 70 aa4.33□□□□□ -1.72
TGFBR1-206ENST00000549021 CFC1BP0CG36 223 aa4.33□□□□□ -1.72
TGFBR1-206ENST00000549021 CFC1P0CG37 223 aa4.33□□□□□ -1.72
TGFBR1-206ENST00000549021 XGP55808 180 aa4.33□□□□□ -1.72
TGFBR1-206ENST00000549021 C6orf223Q8N319 242 aa4.33□□□□□ -1.72
TGFBR1-206ENST00000549021 DAND5Q8N907 189 aa4.33□□□□□ -1.72
TGFBR1-206ENST00000549021 MUC7Q8TAX7 377 aa4.33□□□□□ -1.72
TGFBR1-206ENST00000549021 C2orf48Q96LS8 159 aa4.33□□□□□ -1.72
TGFBR1-206ENST00000549021 KRTAP1-5Q9BYS1 174 aa4.33□□□□□ -1.72
TGFBR1-206ENST00000549021 GVQW2A0A096LPI5 108 aaPredicted RBP4.32□□□□□ -1.72
TGFBR1-206ENST00000549021 LOC107984156A0A0G2JMH3 177 aa4.32□□□□□ -1.72
TGFBR1-206ENST00000549021 LINC00158P58513 81 aa4.32□□□□□ -1.72
TGFBR1-206ENST00000549021 NPC2P61916 151 aa4.32□□□□□ -1.72
TGFBR1-206ENST00000549021 UNQ6190/PRO20217Q6UXQ8 127 aa4.32□□□□□ -1.72
TGFBR1-206ENST00000549021 SOSTDC1Q6X4U4 206 aa4.32□□□□□ -1.72
TGFBR1-206ENST00000549021 ARL17AQ8IVW1 177 aa4.32□□□□□ -1.72
TGFBR1-206ENST00000549021 MIR7-3HGQ8N6C7 128 aa4.32□□□□□ -1.72
TGFBR1-206ENST00000549021 RAB37Q96AX2 223 aa4.32□□□□□ -1.72
TGFBR1-206ENST00000549021 LYSTQ99698 3801 aa4.32□□□□□ -1.72
TGFBR1-206ENST00000549021 A0A0B4J2C4 111 aa4.31□□□□□ -1.72
TGFBR1-206ENST00000549021 TRBV30A0A0K0K1B3 111 aa4.31□□□□□ -1.72
TGFBR1-206ENST00000549021 NBDYA0A0U1RRE5 68 aa4.31□□□□□ -1.72
TGFBR1-206ENST00000549021 K7ERJ3 54 aa4.31□□□□□ -1.72
TGFBR1-206ENST00000549021 PFN2P35080 140 aa4.31□□□□□ -1.72
TGFBR1-206ENST00000549021 TTC32Q5I0X7 151 aa4.31□□□□□ -1.72
TGFBR1-206ENST00000549021 LINC00526Q96FQ7 95 aa4.31□□□□□ -1.72
TGFBR1-206ENST00000549021 PRAC1Q96KF2 57 aa4.31□□□□□ -1.72
TGFBR1-206ENST00000549021 PRO1854Q9UHT4 67 aa4.31□□□□□ -1.72
TGFBR1-206ENST00000549021 DNAH1Q9P2D7 4330 aa4.31□□□□□ -1.72
TGFBR1-206ENST00000549021 PLECQ15149 4684 aaKnown RBP4.3□□□□□ -1.72
TGFBR1-206ENST00000549021 HIGD2BQ4VC39 106 aa4.3□□□□□ -1.72
TGFBR1-206ENST00000549021 C9orf116Q5BN46 136 aaPredicted RBP4.3□□□□□ -1.72
TGFBR1-206ENST00000549021 CASC10Q5T4H9 136 aa4.3□□□□□ -1.72
TGFBR1-206ENST00000549021 Q6ZVQ6 151 aa4.3□□□□□ -1.72
TGFBR1-206ENST00000549021 CAMK2N2Q96S95 79 aa4.3□□□□□ -1.72
TGFBR1-206ENST00000549021 C6orf48Q9UBA6 75 aa4.3□□□□□ -1.72
TGFBR1-206ENST00000549021 H3BUT2 72 aa4.29□□□□□ -1.72
TGFBR1-206ENST00000549021 SYCNQ0VAF6 134 aa4.29□□□□□ -1.72
TGFBR1-206ENST00000549021 Q6ZRU5 148 aa4.29□□□□□ -1.72
TGFBR1-206ENST00000549021 VPS13DQ5THJ4 4388 aa4.28□□□□□ -1.72
TGFBR1-206ENST00000549021 A0A1W2PPM0 123 aa4.28□□□□□ -1.72
TGFBR1-206ENST00000549021 KRTAP29-1A8MX34 341 aaPredicted RBP4.28□□□□□ -1.72
TGFBR1-206ENST00000549021 C3orf84H3BNL1 204 aa4.28□□□□□ -1.72
TGFBR1-206ENST00000549021 TSPAN13O95857 204 aa4.28□□□□□ -1.72
TGFBR1-206ENST00000549021 SND1-IT1Q9HBX3 110 aa4.28□□□□□ -1.72
TGFBR1-206ENST00000549021 STARD9Q9P2P6 4700 aa4.28□□□□□ -1.72
TGFBR1-206ENST00000549021 IGKV2-28A0A075B6P5 120 aa4.27□□□□□ -1.73
TGFBR1-206ENST00000549021 NDUFC2-KCTD14E9PQ53 114 aa4.27□□□□□ -1.73
TGFBR1-206ENST00000549021 PSCAO43653 123 aa4.27□□□□□ -1.73
TGFBR1-206ENST00000549021 NDUFC2O95298 119 aa4.27□□□□□ -1.73
TGFBR1-206ENST00000549021 IGKV2D-28P01615 120 aa4.27□□□□□ -1.73
TGFBR1-206ENST00000549021 TLX1NBP0CAT3 122 aa4.27□□□□□ -1.73
TGFBR1-206ENST00000549021 Q6ZR54 194 aa4.27□□□□□ -1.73
TGFBR1-206ENST00000549021 Q6ZRN7 208 aaPredicted RBP4.27□□□□□ -1.73
TGFBR1-206ENST00000549021 NAA38Q9BRA0 125 aaKnown RBP4.27□□□□□ -1.73
TGFBR1-206ENST00000549021 TRAV13-2A0A0B4J235 113 aa4.26□□□□□ -1.73
TGFBR1-206ENST00000549021 LECT2O14960 151 aa4.26□□□□□ -1.73
TGFBR1-206ENST00000549021 FABP2P12104 132 aa4.26□□□□□ -1.73
TGFBR1-206ENST00000549021 VAMP3Q15836 100 aa4.26□□□□□ -1.73
TGFBR1-206ENST00000549021 C14orf177Q52M58 125 aa4.26□□□□□ -1.73
TGFBR1-206ENST00000549021 LINC00337Q8N6G1 96 aa4.26□□□□□ -1.73
TGFBR1-206ENST00000549021 CARD19Q96LW7 228 aa4.26□□□□□ -1.73
TGFBR1-206ENST00000549021 FAM218AQ96MZ4 157 aa4.26□□□□□ -1.73
TGFBR1-206ENST00000549021 LRCOL1A6NCL2 159 aa4.25□□□□□ -1.73
TGFBR1-206ENST00000549021 K7EP34 96 aa4.25□□□□□ -1.73
TGFBR1-206ENST00000549021 RPL13AP40429 203 aaKnown RBP4.25□□□□□ -1.73
TGFBR1-206ENST00000549021 CNBPP62633 177 aaKnown RBP4.25□□□□□ -1.73
TGFBR1-206ENST00000549021 WFDC2Q14508 124 aa4.25□□□□□ -1.73
TGFBR1-206ENST00000549021 H7C2G1 150 aa4.24□□□□□ -1.73
TGFBR1-206ENST00000549021 M0R2N4 97 aa4.24□□□□□ -1.73
TGFBR1-206ENST00000549021 Q1RN00 199 aa4.24□□□□□ -1.73
TGFBR1-206ENST00000549021 LYRM7Q5U5X0 104 aa4.24□□□□□ -1.73
TGFBR1-206ENST00000549021 Q6ZRP5 223 aa4.24□□□□□ -1.73
TGFBR1-206ENST00000549021 GTF2H5Q6ZYL4 71 aa4.24□□□□□ -1.73
TGFBR1-206ENST00000549021 Q8NDZ9 215 aa4.24□□□□□ -1.73
TGFBR1-206ENST00000549021 CBY1Q9Y3M2 126 aa4.24□□□□□ -1.73
TGFBR1-206ENST00000549021 SPCS1Q9Y6A9 102 aa4.24□□□□□ -1.73
TGFBR1-206ENST00000549021 TRBV20-1A0A075B6N2 111 aa4.23□□□□□ -1.73
TGFBR1-206ENST00000549021 TRBV10-2A0A0K0K1G8 114 aa4.23□□□□□ -1.73
TGFBR1-206ENST00000549021 LOC107984640A0A0U1RRK4 108 aa4.23□□□□□ -1.73
TGFBR1-206ENST00000549021 LY6G6CO95867 125 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms