RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 KRTDAPP60985 99 aa-1.66□□□□□ -2.68
DEPDC4-205ENST00000548313 LAMA1P25391 3075 aa-1.66□□□□□ -2.68
DEPDC4-205ENST00000548313 CHD1O14646 1710 aa-1.66□□□□□ -2.68
DEPDC4-205ENST00000548313 SPHKAPQ2M3C7 1700 aa-1.66□□□□□ -2.68
DEPDC4-205ENST00000548313 CGREF1Q99674 301 aa-1.67□□□□□ -2.68
DEPDC4-205ENST00000548313 EIF4G3O43432 1585 aaKnown RBP-1.68□□□□□ -2.68
DEPDC4-205ENST00000548313 H3BQF6 201 aa-1.68□□□□□ -2.68
DEPDC4-205ENST00000548313 SNCAP37840 140 aa-1.68□□□□□ -2.68
DEPDC4-205ENST00000548313 PPP3R1P63098 170 aa-1.68□□□□□ -2.68
DEPDC4-205ENST00000548313 VAMP8Q9BV40 100 aa-1.68□□□□□ -2.68
DEPDC4-205ENST00000548313 COL4A6Q14031 1691 aa-1.68□□□□□ -2.68
DEPDC4-205ENST00000548313 TOPAZ1Q8N9V7 1692 aa-1.68□□□□□ -2.68
DEPDC4-205ENST00000548313 ANKRD36A6QL64 1941 aa-1.69□□□□□ -2.68
DEPDC4-205ENST00000548313 PRRC2CQ9Y520 2896 aaKnown RBP-1.69□□□□□ -2.68
DEPDC4-205ENST00000548313 DEFA5Q01523 94 aa-1.69□□□□□ -2.68
DEPDC4-205ENST00000548313 RNF213Q63HN8 5207 aa-1.69□□□□□ -2.68
DEPDC4-205ENST00000548313 DSPP15924 2871 aaKnown RBP-1.69□□□□□ -2.68
DEPDC4-205ENST00000548313 TARBP1Q13395 1621 aaKnown RBP-1.69□□□□□ -2.68
DEPDC4-205ENST00000548313 CC2D2AQ9P2K1 1620 aa-1.69□□□□□ -2.68
DEPDC4-205ENST00000548313 KNL1Q8NG31 2342 aa-1.7□□□□□ -2.68
DEPDC4-205ENST00000548313 PTPN23Q9H3S7 1636 aa-1.7□□□□□ -2.68
DEPDC4-205ENST00000548313 AKAP13Q12802 2813 aa-1.71□□□□□ -2.68
DEPDC4-205ENST00000548313 ADAMTS12P58397 1594 aa-1.71□□□□□ -2.68
DEPDC4-205ENST00000548313 C7orf77A4D0Y5 90 aa-1.71□□□□□ -2.68
DEPDC4-205ENST00000548313 TMEM262E9PQX1 116 aa-1.71□□□□□ -2.68
DEPDC4-205ENST00000548313 CORTO00230 105 aa-1.71□□□□□ -2.68
DEPDC4-205ENST00000548313 CCL22O00626 93 aa-1.71□□□□□ -2.68
DEPDC4-205ENST00000548313 DLEU1O43261 78 aa-1.71□□□□□ -2.68
DEPDC4-205ENST00000548313 TRANK1O15050 2925 aa-1.71□□□□□ -2.68
DEPDC4-205ENST00000548313 SLIT1O75093 1534 aa-1.71□□□□□ -2.68
DEPDC4-205ENST00000548313 DNAH9Q9NYC9 4486 aa-1.72□□□□□ -2.68
DEPDC4-205ENST00000548313 A0A0G2JND7 137 aa-1.72□□□□□ -2.68
DEPDC4-205ENST00000548313 H0Y9P7 68 aa-1.72□□□□□ -2.68
DEPDC4-205ENST00000548313 MRPL34Q9BQ48 92 aaKnown RBP-1.72□□□□□ -2.68
DEPDC4-205ENST00000548313 SHPRHQ149N8 1683 aa-1.72□□□□□ -2.68
DEPDC4-205ENST00000548313 KNDC1Q76NI1 1749 aa-1.73□□□□□ -2.69
DEPDC4-205ENST00000548313 EFCAB10A6NFE3 127 aa-1.73□□□□□ -2.69
DEPDC4-205ENST00000548313 MT1AP04731 61 aa-1.73□□□□□ -2.69
DEPDC4-205ENST00000548313 CUBNO60494 3623 aa-1.73□□□□□ -2.69
DEPDC4-205ENST00000548313 PZPP20742 1482 aa-1.74□□□□□ -2.69
DEPDC4-205ENST00000548313 COL14A1Q05707 1796 aaKnown RBP-1.74□□□□□ -2.69
DEPDC4-205ENST00000548313 HSD52Q0P140 79 aa-1.75□□□□□ -2.69
DEPDC4-205ENST00000548313 NCOA3Q9Y6Q9 1424 aa-1.75□□□□□ -2.69
DEPDC4-205ENST00000548313 DNHD1Q96M86 4753 aa-1.75□□□□□ -2.69
DEPDC4-205ENST00000548313 ANK3Q12955 4377 aaKnown RBP-1.76□□□□□ -2.69
DEPDC4-205ENST00000548313 VPS13BQ7Z7G8 4022 aa-1.76□□□□□ -2.69
DEPDC4-205ENST00000548313 GNGT1P63211 74 aa-1.76□□□□□ -2.69
DEPDC4-205ENST00000548313 DEFB107AQ8IZN7 70 aa-1.76□□□□□ -2.69
DEPDC4-205ENST00000548313 H0YGG7 62 aa-1.77□□□□□ -2.69
DEPDC4-205ENST00000548313 ABCA3Q99758 1704 aa-1.77□□□□□ -2.69
DEPDC4-205ENST00000548313 ANKRD11Q6UB99 2663 aaPredicted RBP-1.78□□□□□ -2.69
DEPDC4-205ENST00000548313 TRAV30A0A087WSZ9 112 aa-1.78□□□□□ -2.69
DEPDC4-205ENST00000548313 A0A1B0GV90 55 aa-1.78□□□□□ -2.69
DEPDC4-205ENST00000548313 hADV29S1A0JD25 119 aa-1.78□□□□□ -2.69
DEPDC4-205ENST00000548313 ARMS2P0C7Q2 107 aa-1.78□□□□□ -2.69
DEPDC4-205ENST00000548313 PSMG4Q5JS54 123 aa-1.78□□□□□ -2.69
DEPDC4-205ENST00000548313 HEPN1Q6WQI6 88 aa-1.78□□□□□ -2.69
DEPDC4-205ENST00000548313 CUX1P39880 1505 aa-1.79□□□□□ -2.7
DEPDC4-205ENST00000548313 CLIP1P30622 1438 aa-1.79□□□□□ -2.7
DEPDC4-205ENST00000548313 S100A1P23297 94 aa-1.79□□□□□ -2.7
DEPDC4-205ENST00000548313 CDKN2A-AS1Q9UH64 79 aa-1.79□□□□□ -2.7
DEPDC4-205ENST00000548313 LAMA3Q16787 3333 aa-1.79□□□□□ -2.7
DEPDC4-205ENST00000548313 SPTY2D1-AS1A0A0U1RR47 76 aa-1.8□□□□□ -2.7
DEPDC4-205ENST00000548313 NDUFC1O43677 76 aa-1.8□□□□□ -2.7
DEPDC4-205ENST00000548313 PMCHL1Q16048 86 aa-1.8□□□□□ -2.7
DEPDC4-205ENST00000548313 CACFD1Q9UGQ2 172 aa-1.8□□□□□ -2.7
DEPDC4-205ENST00000548313 WDR87Q6ZQQ6 2873 aa-1.8□□□□□ -2.7
DEPDC4-205ENST00000548313 MON2Q7Z3U7 1717 aa-1.8□□□□□ -2.7
DEPDC4-205ENST00000548313 TRBV25-1A0A075B6N4 114 aa-1.81□□□□□ -2.7
DEPDC4-205ENST00000548313 TEX15Q9BXT5 2789 aa-1.81□□□□□ -2.7
DEPDC4-205ENST00000548313 LYSTQ99698 3801 aa-1.82□□□□□ -2.7
DEPDC4-205ENST00000548313 H3BNG1 76 aa-1.82□□□□□ -2.7
DEPDC4-205ENST00000548313 MRPS10P82664 201 aaKnown RBP-1.82□□□□□ -2.7
DEPDC4-205ENST00000548313 ZZEF1O43149 2961 aa-1.82□□□□□ -2.7
DEPDC4-205ENST00000548313 BCORQ6W2J9 1755 aa-1.82□□□□□ -2.7
DEPDC4-205ENST00000548313 ABCC5O15440 1437 aa-1.83□□□□□ -2.7
DEPDC4-205ENST00000548313 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.83□□□□□ -2.7
DEPDC4-205ENST00000548313 C5P01031 1676 aa-1.83□□□□□ -2.7
DEPDC4-205ENST00000548313 ASIPP42127 132 aa-1.83□□□□□ -2.7
DEPDC4-205ENST00000548313 GTF2H5Q6ZYL4 71 aa-1.83□□□□□ -2.7
DEPDC4-205ENST00000548313 HIGD1BQ9P298 99 aa-1.83□□□□□ -2.7
DEPDC4-205ENST00000548313 MLH3Q9UHC1 1453 aa-1.83□□□□□ -2.7
DEPDC4-205ENST00000548313 ACACAQ13085 2346 aa-1.84□□□□□ -2.7
DEPDC4-205ENST00000548313 TRBV7-7A0A0K0K1E9 115 aa-1.84□□□□□ -2.7
DEPDC4-205ENST00000548313 LELP1Q5T871 98 aa-1.84□□□□□ -2.7
DEPDC4-205ENST00000548313 WFDC13Q8IUB5 93 aa-1.84□□□□□ -2.7
DEPDC4-205ENST00000548313 TMEM203Q969S6 136 aa-1.84□□□□□ -2.7
DEPDC4-205ENST00000548313 GNG8Q9UK08 70 aa-1.84□□□□□ -2.7
DEPDC4-205ENST00000548313 MGAM2Q2M2H8 2515 aa-1.84□□□□□ -2.7
DEPDC4-205ENST00000548313 CICQ96RK0 1608 aaPredicted RBP-1.84□□□□□ -2.7
DEPDC4-205ENST00000548313 DNAH11Q96DT5 4516 aa-1.85□□□□□ -2.7
DEPDC4-205ENST00000548313 SAMD9Q5K651 1589 aa-1.85□□□□□ -2.7
DEPDC4-205ENST00000548313 ABCC2Q92887 1545 aa-1.85□□□□□ -2.71
DEPDC4-205ENST00000548313 KIF20BQ96Q89 1820 aa-1.86□□□□□ -2.71
DEPDC4-205ENST00000548313 MT1HP80294 61 aa-1.86□□□□□ -2.71
DEPDC4-205ENST00000548313 C2orf88Q9BSF0 95 aa-1.86□□□□□ -2.71
DEPDC4-205ENST00000548313 RGPD2P0DJD1 1756 aa-1.86□□□□□ -2.71
DEPDC4-205ENST00000548313 FAM135AQ9P2D6 1515 aa-1.86□□□□□ -2.71
DEPDC4-205ENST00000548313 RIF1Q5UIP0 2472 aaKnown RBP-1.86□□□□□ -2.71
DEPDC4-205ENST00000548313 MPC2O95563 127 aa-1.87□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms