RNA–Protein interactions for RNA: ENST00000547188.1

PRDM4-202, Transcript of PR/SET domain 4, humanhuman

TSL 3

Gene PRDM4, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-202ENST00000547188 FLGP20930 4061 aaPredicted RBP12.95□□□□□ -0.34
PRDM4-202ENST00000547188 CKS1BP61024 79 aa12.95□□□□□ -0.34
PRDM4-202ENST00000547188 HERVK_113P63121 156 aa12.95□□□□□ -0.34
PRDM4-202ENST00000547188 CST9LQ9H4G1 147 aa12.95□□□□□ -0.34
PRDM4-202ENST00000547188 CDKN2A-AS1Q9UH64 79 aa12.95□□□□□ -0.34
PRDM4-202ENST00000547188 IGLV8-61A0A075B6I0 122 aa12.94□□□□□ -0.34
PRDM4-202ENST00000547188 PLEKHB2Q96CS7 222 aa12.93□□□□□ -0.34
PRDM4-202ENST00000547188 SYNE2Q8WXH0 6885 aaKnown RBP12.92□□□□□ -0.34
PRDM4-202ENST00000547188 PRSS2P07478 247 aa12.92□□□□□ -0.34
PRDM4-202ENST00000547188 Q8NBF4 154 aa12.92□□□□□ -0.34
PRDM4-202ENST00000547188 IGKV2-28A0A075B6P5 120 aa12.91□□□□□ -0.34
PRDM4-202ENST00000547188 IGLV5-45A0A087WSX0 123 aa12.91□□□□□ -0.34
PRDM4-202ENST00000547188 TINCRA0A1B0GVN0 87 aa12.91□□□□□ -0.34
PRDM4-202ENST00000547188 IGKV2D-28P01615 120 aa12.91□□□□□ -0.34
PRDM4-202ENST00000547188 PMVKQ15126 192 aa12.91□□□□□ -0.34
PRDM4-202ENST00000547188 PCOTHQ58A44 107 aa12.91□□□□□ -0.34
PRDM4-202ENST00000547188 GEMIN7Q9H840 131 aaKnown RBP12.91□□□□□ -0.34
PRDM4-202ENST00000547188 RAB5BP61020 215 aa12.9□□□□□ -0.34
PRDM4-202ENST00000547188 PDZD11Q5EBL8 140 aa12.9□□□□□ -0.34
PRDM4-202ENST00000547188 FAM19A1Q7Z5A9 133 aa12.9□□□□□ -0.34
PRDM4-202ENST00000547188 SCO1O75880 301 aa12.89□□□□□ -0.35
PRDM4-202ENST00000547188 HBDP02042 147 aa12.89□□□□□ -0.35
PRDM4-202ENST00000547188 C6orf226Q5I0X4 101 aa12.89□□□□□ -0.35
PRDM4-202ENST00000547188 Q8IZM0 81 aa12.89□□□□□ -0.35
PRDM4-202ENST00000547188 PMCHL1Q16048 86 aa12.88□□□□□ -0.35
PRDM4-202ENST00000547188 NDUFA12Q9UI09 145 aa12.87□□□□□ -0.35
PRDM4-202ENST00000547188 SMIM1B2RUZ4 78 aa12.86□□□□□ -0.35
PRDM4-202ENST00000547188 CHCHD1Q96BP2 118 aaKnown RBP12.85□□□□□ -0.35
PRDM4-202ENST00000547188 NKAPP1Q8N9T2 125 aa12.84□□□□□ -0.35
PRDM4-202ENST00000547188 TMEM238C9JI98 176 aa12.83□□□□□ -0.36
PRDM4-202ENST00000547188 SPINK1P00995 79 aa12.83□□□□□ -0.36
PRDM4-202ENST00000547188 TRGC2P03986 189 aa12.83□□□□□ -0.36
PRDM4-202ENST00000547188 IGLC3P0DOY3 106 aa12.83□□□□□ -0.36
PRDM4-202ENST00000547188 IGLV5-37A0A075B6J1 123 aa12.82□□□□□ -0.36
PRDM4-202ENST00000547188 COLCA2A8K830 154 aa12.82□□□□□ -0.36
PRDM4-202ENST00000547188 KRTAP4-16G5E9R7 235 aaPredicted RBP12.82□□□□□ -0.36
PRDM4-202ENST00000547188 ATP5LO75964 103 aa12.82□□□□□ -0.36
PRDM4-202ENST00000547188 MACF1Q9UPN3 7388 aaKnown RBP12.82□□□□□ -0.36
PRDM4-202ENST00000547188 F8VRH5 84 aa12.8□□□□□ -0.36
PRDM4-202ENST00000547188 TMEM126AQ9H061 195 aa12.8□□□□□ -0.36
PRDM4-202ENST00000547188 SPINK8P0C7L1 97 aa12.79□□□□□ -0.36
PRDM4-202ENST00000547188 NDUFA6P56556 154 aa12.79□□□□□ -0.36
PRDM4-202ENST00000547188 Q8N377 158 aa12.79□□□□□ -0.36
PRDM4-202ENST00000547188 SPRR4Q96PI1 79 aa12.79□□□□□ -0.36
PRDM4-202ENST00000547188 HIGD2AQ9BW72 106 aa12.79□□□□□ -0.36
PRDM4-202ENST00000547188 CXCL5P42830 114 aa12.78□□□□□ -0.36
PRDM4-202ENST00000547188 COX6B2Q6YFQ2 88 aa12.78□□□□□ -0.36
PRDM4-202ENST00000547188 COX7B2Q8TF08 81 aa12.78□□□□□ -0.36
PRDM4-202ENST00000547188 BAGE3Q86Y29 109 aa12.77□□□□□ -0.37
PRDM4-202ENST00000547188 IGLV5-39A0A0G2JS06 123 aa12.76□□□□□ -0.37
PRDM4-202ENST00000547188 H3BRM9 83 aa12.76□□□□□ -0.37
PRDM4-202ENST00000547188 ZNF22P17026 224 aaPredicted RBP12.76□□□□□ -0.37
PRDM4-202ENST00000547188 LINC00310P59036 64 aa12.76□□□□□ -0.37
PRDM4-202ENST00000547188 FAM19A2Q8N3H0 131 aa12.75□□□□□ -0.37
PRDM4-202ENST00000547188 C11orf86A6NJI1 115 aa12.74□□□□□ -0.37
PRDM4-202ENST00000547188 IFI27L1Q96BM0 104 aa12.74□□□□□ -0.37
PRDM4-202ENST00000547188 M0R378 163 aa12.73□□□□□ -0.37
PRDM4-202ENST00000547188 HSBP1O75506 76 aa12.73□□□□□ -0.37
PRDM4-202ENST00000547188 TRAV12-1A0A0B4J245 112 aa12.72□□□□□ -0.37
PRDM4-202ENST00000547188 SERF1AO75920 110 aa12.71□□□□□ -0.37
PRDM4-202ENST00000547188 CHTOPQ9Y3Y2 248 aaKnown RBP12.71□□□□□ -0.37
PRDM4-202ENST00000547188 KRTAP19-1Q8IUB9 90 aa12.7□□□□□ -0.38
PRDM4-202ENST00000547188 SLC25A20O43772 301 aa12.68□□□□□ -0.38
PRDM4-202ENST00000547188 TMEM170BQ5T4T1 132 aa12.66□□□□□ -0.38
PRDM4-202ENST00000547188 TMEM223A0PJW6 202 aa12.63□□□□□ -0.39
PRDM4-202ENST00000547188 LEPROTL1O95214 131 aa12.63□□□□□ -0.39
PRDM4-202ENST00000547188 RPS29P62273 56 aaKnown RBP12.63□□□□□ -0.39
PRDM4-202ENST00000547188 ZNF706Q9Y5V0 76 aaPredicted RBP12.63□□□□□ -0.39
PRDM4-202ENST00000547188 C9orf92A6NGG3 77 aa12.62□□□□□ -0.39
PRDM4-202ENST00000547188 ZNF625Q96I27 306 aaPredicted RBP12.61□□□□□ -0.39
PRDM4-202ENST00000547188 HIST1H2BKO60814 126 aa12.6□□□□□ -0.39
PRDM4-202ENST00000547188 HIST1H2BJP06899 126 aa12.6□□□□□ -0.39
PRDM4-202ENST00000547188 VPREB1P12018 145 aa12.6□□□□□ -0.39
PRDM4-202ENST00000547188 HIST1H2BOP23527 126 aa12.6□□□□□ -0.39
PRDM4-202ENST00000547188 HIST1H2BBP33778 126 aa12.6□□□□□ -0.39
PRDM4-202ENST00000547188 HIST1H2BDP58876 126 aa12.6□□□□□ -0.39
PRDM4-202ENST00000547188 HIST1H2BCP62807 126 aa12.6□□□□□ -0.39
PRDM4-202ENST00000547188 HIST2H2BEQ16778 126 aa12.6□□□□□ -0.39
PRDM4-202ENST00000547188 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.6□□□□□ -0.39
PRDM4-202ENST00000547188 HIST1H2BHQ93079 126 aa12.6□□□□□ -0.39
PRDM4-202ENST00000547188 HIST1H2BNQ99877 126 aa12.6□□□□□ -0.39
PRDM4-202ENST00000547188 HIST1H2BMQ99879 126 aa12.6□□□□□ -0.39
PRDM4-202ENST00000547188 MOBPQ13875 183 aa12.59□□□□□ -0.39
PRDM4-202ENST00000547188 SFTA2Q6UW10 78 aa12.59□□□□□ -0.39
PRDM4-202ENST00000547188 HSPB8Q9UJY1 196 aa12.59□□□□□ -0.39
PRDM4-202ENST00000547188 ERG28Q9UKR5 140 aa12.58□□□□□ -0.4
PRDM4-202ENST00000547188 PFN2P35080 140 aa12.57□□□□□ -0.4
PRDM4-202ENST00000547188 COX17Q14061 63 aa12.57□□□□□ -0.4
PRDM4-202ENST00000547188 IGLV9-49A0A0B4J1Y8 123 aa12.56□□□□□ -0.4
PRDM4-202ENST00000547188 CFC1P0CG37 223 aa12.56□□□□□ -0.4
PRDM4-202ENST00000547188 FABP4P15090 132 aa12.56□□□□□ -0.4
PRDM4-202ENST00000547188 H0Y8G0 127 aa12.55□□□□□ -0.4
PRDM4-202ENST00000547188 SND1-IT1Q9HBX3 110 aa12.54□□□□□ -0.4
PRDM4-202ENST00000547188 Q8NDZ9 215 aa12.53□□□□□ -0.4
PRDM4-202ENST00000547188 PLNP26678 52 aa12.52□□□□□ -0.41
PRDM4-202ENST00000547188 KRTAP9-8Q9BYQ0 159 aa12.52□□□□□ -0.41
PRDM4-202ENST00000547188 SMCR5Q8TEV8 140 aa12.51□□□□□ -0.41
PRDM4-202ENST00000547188 DPM2O94777 84 aa12.49□□□□□ -0.41
PRDM4-202ENST00000547188 GAGE2AQ6NT46 116 aa12.49□□□□□ -0.41
PRDM4-202ENST00000547188 SSBP3-AS1Q7Z2R9 100 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms