RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 KRTAP26-1Q6PEX3 210 aa7.94□□□□□ -1.14
CCDC38-202ENST00000546386 SMIM11BQ8TCY0 68 aa7.94□□□□□ -1.14
CCDC38-202ENST00000546386 H3BNG1 76 aa7.93□□□□□ -1.14
CCDC38-202ENST00000546386 VPS25Q9BRG1 176 aa7.93□□□□□ -1.14
CCDC38-202ENST00000546386 RPL18AQ02543 176 aaKnown RBP7.93□□□□□ -1.14
CCDC38-202ENST00000546386 LINC01556Q5JQF7 62 aa7.92□□□□□ -1.14
CCDC38-202ENST00000546386 SLC25A20O43772 301 aa7.92□□□□□ -1.14
CCDC38-202ENST00000546386 UBE2DNLQ8IWF7 75 aa7.92□□□□□ -1.14
CCDC38-202ENST00000546386 KLK5Q9Y337 293 aaPredicted RBP7.92□□□□□ -1.14
CCDC38-202ENST00000546386 TEX49A0A1B0GTD5 131 aa7.91□□□□□ -1.14
CCDC38-202ENST00000546386 F8W1H4 67 aa7.91□□□□□ -1.14
CCDC38-202ENST00000546386 LCE2AQ5TA79 106 aaPredicted RBP7.91□□□□□ -1.14
CCDC38-202ENST00000546386 A0A087WYN8 130 aa7.91□□□□□ -1.14
CCDC38-202ENST00000546386 TRBV30A0A0K0K1B3 111 aa7.91□□□□□ -1.14
CCDC38-202ENST00000546386 ANKRD29Q8N6D5 301 aa7.91□□□□□ -1.14
CCDC38-202ENST00000546386 B9D2Q9BPU9 175 aa7.91□□□□□ -1.14
CCDC38-202ENST00000546386 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.9□□□□□ -1.14
CCDC38-202ENST00000546386 COX6CP09669 75 aa7.9□□□□□ -1.15
CCDC38-202ENST00000546386 NTN5Q8WTR8 489 aaPredicted RBP7.9□□□□□ -1.15
CCDC38-202ENST00000546386 ATXN8Q156A1 80 aa7.89□□□□□ -1.15
CCDC38-202ENST00000546386 DNAH10OSP0CZ25 163 aa7.88□□□□□ -1.15
CCDC38-202ENST00000546386 Q6ZRP5 223 aa7.88□□□□□ -1.15
CCDC38-202ENST00000546386 CARD19Q96LW7 228 aa7.88□□□□□ -1.15
CCDC38-202ENST00000546386 VPS13DQ5THJ4 4388 aa7.88□□□□□ -1.15
CCDC38-202ENST00000546386 USP17L23D6RBM5 183 aa7.88□□□□□ -1.15
CCDC38-202ENST00000546386 C15orf53Q8NAA6 179 aa7.88□□□□□ -1.15
CCDC38-202ENST00000546386 DNAH2Q9P225 4427 aa7.88□□□□□ -1.15
CCDC38-202ENST00000546386 FAM168BA1KXE4 195 aa7.87□□□□□ -1.15
CCDC38-202ENST00000546386 TRBV20-1A0A075B6N2 111 aa7.87□□□□□ -1.15
CCDC38-202ENST00000546386 S100A7L2Q5SY68 101 aa7.86□□□□□ -1.15
CCDC38-202ENST00000546386 TRAV13-2A0A0B4J235 113 aa7.86□□□□□ -1.15
CCDC38-202ENST00000546386 C9orf129Q5T035 196 aaKnown RBP7.86□□□□□ -1.15
CCDC38-202ENST00000546386 K7ERU9 68 aa7.85□□□□□ -1.15
CCDC38-202ENST00000546386 LYRM7Q5U5X0 104 aa7.85□□□□□ -1.15
CCDC38-202ENST00000546386 C6orf99Q4VX62 202 aa7.85□□□□□ -1.15
CCDC38-202ENST00000546386 APLNQ9ULZ1 77 aa7.85□□□□□ -1.15
CCDC38-202ENST00000546386 LST1O00453 97 aa7.84□□□□□ -1.15
CCDC38-202ENST00000546386 PSCAO43653 123 aa7.84□□□□□ -1.15
CCDC38-202ENST00000546386 GAGE2BQ13066 116 aa7.84□□□□□ -1.15
CCDC38-202ENST00000546386 IGKV2-24A0A0C4DH68 120 aa7.83□□□□□ -1.16
CCDC38-202ENST00000546386 RPL37AP8A6NKH3 93 aa7.83□□□□□ -1.16
CCDC38-202ENST00000546386 CXCL5P42830 114 aa7.83□□□□□ -1.16
CCDC38-202ENST00000546386 COPS9Q8WXC6 57 aa7.83□□□□□ -1.16
CCDC38-202ENST00000546386 TRBV10-3A0A0K0K1G6 114 aa7.83□□□□□ -1.16
CCDC38-202ENST00000546386 SYCNQ0VAF6 134 aa7.83□□□□□ -1.16
CCDC38-202ENST00000546386 HYDINQ4G0P3 5121 aa7.82□□□□□ -1.16
CCDC38-202ENST00000546386 SERTAD4-AS1Q5TG53 156 aa7.81□□□□□ -1.16
CCDC38-202ENST00000546386 FRAS1Q86XX4 4008 aa7.81□□□□□ -1.16
CCDC38-202ENST00000546386 TEN1Q86WV5 123 aa7.81□□□□□ -1.16
CCDC38-202ENST00000546386 DYNC2H1Q8NCM8 4307 aaKnown RBP7.81□□□□□ -1.16
CCDC38-202ENST00000546386 BAALC-AS2P0C853 105 aa7.8□□□□□ -1.16
CCDC38-202ENST00000546386 RPL28P46779 137 aaKnown RBP7.8□□□□□ -1.16
CCDC38-202ENST00000546386 COX17Q14061 63 aa7.8□□□□□ -1.16
CCDC38-202ENST00000546386 TRBV10-2A0A0K0K1G8 114 aa7.8□□□□□ -1.16
CCDC38-202ENST00000546386 LINC01561Q8N1V8 128 aa7.79□□□□□ -1.16
CCDC38-202ENST00000546386 NDUFC2-KCTD14E9PQ53 114 aa7.78□□□□□ -1.16
CCDC38-202ENST00000546386 FAM19A5Q7Z5A7 132 aaPredicted RBP7.78□□□□□ -1.16
CCDC38-202ENST00000546386 CHTF8P0CG12 524 aa7.78□□□□□ -1.16
CCDC38-202ENST00000546386 DNAH6Q9C0G6 4158 aa7.78□□□□□ -1.16
CCDC38-202ENST00000546386 DNAL4O96015 105 aa7.77□□□□□ -1.16
CCDC38-202ENST00000546386 TMEM126AQ9H061 195 aa7.77□□□□□ -1.16
CCDC38-202ENST00000546386 GVQW2A0A096LPI5 108 aaPredicted RBP7.77□□□□□ -1.17
CCDC38-202ENST00000546386 C22orf24Q9Y442 160 aa7.76□□□□□ -1.17
CCDC38-202ENST00000546386 CDIP1Q9H305 208 aa7.76□□□□□ -1.17
CCDC38-202ENST00000546386 VPREB1P12018 145 aa7.75□□□□□ -1.17
CCDC38-202ENST00000546386 PPDPFLQ8WWR9 84 aa7.75□□□□□ -1.17
CCDC38-202ENST00000546386 C14orf132Q9NPU4 83 aa7.74□□□□□ -1.17
CCDC38-202ENST00000546386 KRTAP7-1Q8IUC3 87 aa7.73□□□□□ -1.17
CCDC38-202ENST00000546386 UPK3BQ9BT76 320 aa7.73□□□□□ -1.17
CCDC38-202ENST00000546386 LY6G6CO95867 125 aa7.73□□□□□ -1.17
CCDC38-202ENST00000546386 HECTD4Q9Y4D8 3996 aa7.73□□□□□ -1.17
CCDC38-202ENST00000546386 TRAV23DV6A0A075B6W5 121 aa7.72□□□□□ -1.17
CCDC38-202ENST00000546386 NDUFC2O95298 119 aa7.72□□□□□ -1.17
CCDC38-202ENST00000546386 C2orf48Q96LS8 159 aa7.72□□□□□ -1.17
CCDC38-202ENST00000546386 NKAPP1Q8N9T2 125 aa7.71□□□□□ -1.17
CCDC38-202ENST00000546386 DEFB105AQ8NG35 78 aa7.71□□□□□ -1.17
CCDC38-202ENST00000546386 DPH3Q96FX2 82 aa7.71□□□□□ -1.17
CCDC38-202ENST00000546386 NBDYA0A0U1RRE5 68 aa7.71□□□□□ -1.18
CCDC38-202ENST00000546386 NUPR2A6NF83 97 aa7.71□□□□□ -1.18
CCDC38-202ENST00000546386 IGLV6-57P01721 117 aa7.71□□□□□ -1.18
CCDC38-202ENST00000546386 Q8N814 137 aa7.71□□□□□ -1.18
CCDC38-202ENST00000546386 A0A096LNI7 61 aa7.7□□□□□ -1.18
CCDC38-202ENST00000546386 ZNF73O43830 326 aaPredicted RBP7.7□□□□□ -1.18
CCDC38-202ENST00000546386 MT-ATP8P03928 68 aa7.7□□□□□ -1.18
CCDC38-202ENST00000546386 NHLRC4P0CG21 123 aaPredicted RBP7.7□□□□□ -1.18
CCDC38-202ENST00000546386 J3QR89 54 aa7.7□□□□□ -1.18
CCDC38-202ENST00000546386 Q6ZQY7 126 aa7.7□□□□□ -1.18
CCDC38-202ENST00000546386 C7orf33Q8WU49 177 aa7.7□□□□□ -1.18
CCDC38-202ENST00000546386 PANO1I0J062 215 aa7.69□□□□□ -1.18
CCDC38-202ENST00000546386 XGP55808 180 aa7.69□□□□□ -1.18
CCDC38-202ENST00000546386 TRACP01848 142 aa7.69□□□□□ -1.18
CCDC38-202ENST00000546386 TTC32Q5I0X7 151 aa7.69□□□□□ -1.18
CCDC38-202ENST00000546386 GAGE2AQ6NT46 116 aa7.69□□□□□ -1.18
CCDC38-202ENST00000546386 LORP23490 312 aaPredicted RBP7.68□□□□□ -1.18
CCDC38-202ENST00000546386 PCP4P48539 62 aa7.68□□□□□ -1.18
CCDC38-202ENST00000546386 RMI2Q96E14 147 aa7.68□□□□□ -1.18
CCDC38-202ENST00000546386 A0A1W2PNN7 141 aa7.68□□□□□ -1.18
CCDC38-202ENST00000546386 H0YGX0 51 aa7.68□□□□□ -1.18
CCDC38-202ENST00000546386 H3BS24 57 aa7.67□□□□□ -1.18
CCDC38-202ENST00000546386 H3BT86 120 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms