RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 FAM19A4Q96LR4 140 aa6.18□□□□□ -1.42
CLIP1-218ENST00000545889 FAM240AA0A1B0GVK7 77 aa6.18□□□□□ -1.42
CLIP1-218ENST00000545889 FAM229AH3BQW9 127 aa6.18□□□□□ -1.42
CLIP1-218ENST00000545889 SBSPONQ8IVN8 264 aa6.18□□□□□ -1.42
CLIP1-218ENST00000545889 MDFIQ99750 246 aa6.18□□□□□ -1.42
CLIP1-218ENST00000545889 C6orf99Q4VX62 202 aa6.17□□□□□ -1.42
CLIP1-218ENST00000545889 C6orf223Q8N319 242 aa6.17□□□□□ -1.42
CLIP1-218ENST00000545889 TRBV30A0A0K0K1B3 111 aa6.17□□□□□ -1.42
CLIP1-218ENST00000545889 CRYGAP11844 174 aa6.17□□□□□ -1.42
CLIP1-218ENST00000545889 LINC01556Q5JQF7 62 aa6.16□□□□□ -1.42
CLIP1-218ENST00000545889 CYSRT1A8MQ03 144 aa6.16□□□□□ -1.42
CLIP1-218ENST00000545889 C1orf137Q5JT78 98 aa6.16□□□□□ -1.42
CLIP1-218ENST00000545889 CIRBP-AS1Q8TBR5 109 aa6.16□□□□□ -1.42
CLIP1-218ENST00000545889 COX6A2Q02221 97 aa6.16□□□□□ -1.42
CLIP1-218ENST00000545889 DHRS4-AS1Q9P1J3 65 aa6.16□□□□□ -1.42
CLIP1-218ENST00000545889 RNASE3P12724 160 aaKnown RBP6.15□□□□□ -1.42
CLIP1-218ENST00000545889 Q8N2B8 174 aa6.15□□□□□ -1.42
CLIP1-218ENST00000545889 PIK3CD-AS1Q5SR53 167 aa6.15□□□□□ -1.42
CLIP1-218ENST00000545889 KMT2BQ9UMN6 2715 aaPredicted RBP6.15□□□□□ -1.43
CLIP1-218ENST00000545889 A0A0J9YXY3 114 aa6.14□□□□□ -1.43
CLIP1-218ENST00000545889 J3QL48 77 aa6.14□□□□□ -1.43
CLIP1-218ENST00000545889 TIMM17BO60830 172 aa6.14□□□□□ -1.43
CLIP1-218ENST00000545889 TSPEAR-AS2P59090 65 aa6.14□□□□□ -1.43
CLIP1-218ENST00000545889 TRBV27A0A0K0K1C4 114 aa6.14□□□□□ -1.43
CLIP1-218ENST00000545889 C16orf90A8MZG2 172 aa6.14□□□□□ -1.43
CLIP1-218ENST00000545889 PRR9Q5T870 116 aa6.14□□□□□ -1.43
CLIP1-218ENST00000545889 LINC00337Q8N6G1 96 aa6.14□□□□□ -1.43
CLIP1-218ENST00000545889 ZNF580Q9UK33 172 aa6.14□□□□□ -1.43
CLIP1-218ENST00000545889 SNURFQ9Y675 71 aa6.14□□□□□ -1.43
CLIP1-218ENST00000545889 POM121L12Q8N7R1 296 aa6.14□□□□□ -1.43
CLIP1-218ENST00000545889 TENM4Q6N022 2769 aa6.14□□□□□ -1.43
CLIP1-218ENST00000545889 LST1O00453 97 aa6.14□□□□□ -1.43
CLIP1-218ENST00000545889 TRBV6-5A0A0K0K1A5 114 aa6.13□□□□□ -1.43
CLIP1-218ENST00000545889 EGFEM1PQ0D2K5 195 aa6.13□□□□□ -1.43
CLIP1-218ENST00000545889 CCKP06307 115 aa6.13□□□□□ -1.43
CLIP1-218ENST00000545889 SOSTDC1Q6X4U4 206 aa6.13□□□□□ -1.43
CLIP1-218ENST00000545889 NRACQ8N912 160 aa6.12□□□□□ -1.43
CLIP1-218ENST00000545889 UNQ6190/PRO20217Q6UXQ8 127 aa6.12□□□□□ -1.43
CLIP1-218ENST00000545889 NF1P21359 2839 aa6.12□□□□□ -1.43
CLIP1-218ENST00000545889 NDUFC2-KCTD14E9PQ53 114 aa6.12□□□□□ -1.43
CLIP1-218ENST00000545889 Q6ZQY7 126 aa6.12□□□□□ -1.43
CLIP1-218ENST00000545889 WFDC10BQ8IUB3 73 aa6.12□□□□□ -1.43
CLIP1-218ENST00000545889 C11orf21Q9P2W6 132 aa6.12□□□□□ -1.43
CLIP1-218ENST00000545889 TMEM223A0PJW6 202 aa6.11□□□□□ -1.43
CLIP1-218ENST00000545889 SMIM26A0A096LP01 95 aa6.11□□□□□ -1.43
CLIP1-218ENST00000545889 MRPL55Q7Z7F7 128 aaKnown RBP6.11□□□□□ -1.43
CLIP1-218ENST00000545889 LINC00308Q8TCZ7 52 aa6.11□□□□□ -1.43
CLIP1-218ENST00000545889 C2orf48Q96LS8 159 aa6.11□□□□□ -1.43
CLIP1-218ENST00000545889 A8MZ25 164 aa6.1□□□□□ -1.43
CLIP1-218ENST00000545889 FHL2Q14192 279 aa6.1□□□□□ -1.43
CLIP1-218ENST00000545889 LYPD5Q6UWN5 251 aa6.1□□□□□ -1.43
CLIP1-218ENST00000545889 ENHOQ6UWT2 76 aa6.1□□□□□ -1.43
CLIP1-218ENST00000545889 FBN2P35556 2912 aa6.1□□□□□ -1.43
CLIP1-218ENST00000545889 TSHBP01222 138 aa6.1□□□□□ -1.43
CLIP1-218ENST00000545889 SMCR5Q8TEV8 140 aa6.1□□□□□ -1.43
CLIP1-218ENST00000545889 CDC42SE2Q9NRR3 84 aa6.1□□□□□ -1.43
CLIP1-218ENST00000545889 NIPBLQ6KC79 2804 aaeCLIP6.09□□□□□ -1.431e-6■□□□□ 9
CLIP1-218ENST00000545889 C3orf84H3BNL1 204 aa6.09□□□□□ -1.43
CLIP1-218ENST00000545889 SLPIP03973 132 aa6.09□□□□□ -1.43
CLIP1-218ENST00000545889 Q8IZM0 81 aa6.09□□□□□ -1.43
CLIP1-218ENST00000545889 SPATA3Q8NHX4 192 aa6.09□□□□□ -1.43
CLIP1-218ENST00000545889 SERP1Q9Y6X1 66 aa6.09□□□□□ -1.43
CLIP1-218ENST00000545889 NSD1Q96L73 2696 aaPredicted RBP6.09□□□□□ -1.43
CLIP1-218ENST00000545889 ZNF73O43830 326 aaPredicted RBP6.09□□□□□ -1.43
CLIP1-218ENST00000545889 C10orf25Q5T742 122 aa6.08□□□□□ -1.44
CLIP1-218ENST00000545889 MRPS36P82909 103 aaKnown RBP6.08□□□□□ -1.44
CLIP1-218ENST00000545889 K7ERS5 55 aa6.08□□□□□ -1.44
CLIP1-218ENST00000545889 SPENQ96T58 3664 aaKnown RBP6.08□□□□□ -1.44
CLIP1-218ENST00000545889 POLR2KP53803 58 aaKnown RBP6.07□□□□□ -1.44
CLIP1-218ENST00000545889 LINC01561Q8N1V8 128 aa6.07□□□□□ -1.44
CLIP1-218ENST00000545889 SCXQ7RTU7 201 aa6.07□□□□□ -1.44
CLIP1-218ENST00000545889 CYSTM1Q9H1C7 97 aa6.07□□□□□ -1.44
CLIP1-218ENST00000545889 COX17Q14061 63 aa6.06□□□□□ -1.44
CLIP1-218ENST00000545889 PMAIP1Q13794 54 aa6.06□□□□□ -1.44
CLIP1-218ENST00000545889 C9orf116Q5BN46 136 aaPredicted RBP6.06□□□□□ -1.44
CLIP1-218ENST00000545889 REG3GQ6UW15 175 aa6.06□□□□□ -1.44
CLIP1-218ENST00000545889 WFDC13Q8IUB5 93 aa6.06□□□□□ -1.44
CLIP1-218ENST00000545889 KRTAP10-3P60369 221 aa6.06□□□□□ -1.44
CLIP1-218ENST00000545889 Q5XG85 94 aa6.05□□□□□ -1.44
CLIP1-218ENST00000545889 IGLV4-60A0A075B6I1 120 aa6.05□□□□□ -1.44
CLIP1-218ENST00000545889 BEAN1Q3B7T3 259 aa6.05□□□□□ -1.44
CLIP1-218ENST00000545889 ADAMTSL4-AS1Q5T5F5 129 aa6.05□□□□□ -1.44
CLIP1-218ENST00000545889 NBEAL1Q6ZS30 2694 aa6.05□□□□□ -1.44
CLIP1-218ENST00000545889 BSNQ9UPA5 3926 aa6.05□□□□□ -1.44
CLIP1-218ENST00000545889 CELA1Q9UNI1 258 aa6.04□□□□□ -1.44
CLIP1-218ENST00000545889 LINC00846Q9NV44 126 aa6.04□□□□□ -1.44
CLIP1-218ENST00000545889 OXTP01178 125 aa6.03□□□□□ -1.44
CLIP1-218ENST00000545889 Q6ZVQ6 151 aa6.03□□□□□ -1.44
CLIP1-218ENST00000545889 SPTSSBQ8NFR3 76 aa6.03□□□□□ -1.44
CLIP1-218ENST00000545889 KLK9Q2XQG4 91 aa6.03□□□□□ -1.44
CLIP1-218ENST00000545889 LINC00242Q5T6M2 205 aa6.03□□□□□ -1.44
CLIP1-218ENST00000545889 CNFNQ9BYD5 112 aa6.03□□□□□ -1.44
CLIP1-218ENST00000545889 Q6JHZ5 121 aa6.02□□□□□ -1.45
CLIP1-218ENST00000545889 MXRA5Q9NR99 2828 aa6.02□□□□□ -1.45
CLIP1-218ENST00000545889 Q8N9L7 120 aa6.02□□□□□ -1.45
CLIP1-218ENST00000545889 TRBV7-6A0A0J9YX20 115 aa6.02□□□□□ -1.45
CLIP1-218ENST00000545889 NBDYA0A0U1RRE5 68 aa6.02□□□□□ -1.45
CLIP1-218ENST00000545889 ESRGQ1W209 222 aa6.02□□□□□ -1.45
CLIP1-218ENST00000545889 X6R8D5 127 aa6.02□□□□□ -1.45
CLIP1-218ENST00000545889 TRBV10-3A0A0K0K1G6 114 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms