RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 IGHV3-53P01767 116 aa3.85□□□□□ -1.79
XRCC4-206ENST00000542685 COX6A2Q02221 97 aa3.85□□□□□ -1.79
XRCC4-206ENST00000542685 PRB3Q04118 309 aaPredicted RBP3.85□□□□□ -1.79
XRCC4-206ENST00000542685 LINC00208Q96KT6 92 aa3.85□□□□□ -1.79
XRCC4-206ENST00000542685 B9D2Q9BPU9 175 aa3.85□□□□□ -1.79
XRCC4-206ENST00000542685 RHPN1-AS1Q9BWJ2 59 aa3.85□□□□□ -1.79
XRCC4-206ENST00000542685 TRGV2A0A075B6R0 118 aa3.84□□□□□ -1.79
XRCC4-206ENST00000542685 H0Y9J4 135 aa3.84□□□□□ -1.79
XRCC4-206ENST00000542685 KRTAP12-2P59991 146 aa3.84□□□□□ -1.79
XRCC4-206ENST00000542685 Q8NBF4 154 aa3.84□□□□□ -1.79
XRCC4-206ENST00000542685 PRR15LQ9BU68 103 aa3.84□□□□□ -1.79
XRCC4-206ENST00000542685 CELA1Q9UNI1 258 aa3.84□□□□□ -1.79
XRCC4-206ENST00000542685 ICE1Q9Y2F5 2266 aa3.83□□□□□ -1.8
XRCC4-206ENST00000542685 IGHV3OR16-13A0A075B7E8 117 aa3.83□□□□□ -1.8
XRCC4-206ENST00000542685 IGHV3-74A0A0B4J1X5 117 aa3.83□□□□□ -1.8
XRCC4-206ENST00000542685 A6NDX4 124 aa3.83□□□□□ -1.8
XRCC4-206ENST00000542685 LINC00313P59037 77 aa3.83□□□□□ -1.8
XRCC4-206ENST00000542685 KCNQ1DNQ9H478 68 aa3.83□□□□□ -1.8
XRCC4-206ENST00000542685 CEP290O15078 2479 aa3.83□□□□□ -1.8
XRCC4-206ENST00000542685 FREM2Q5SZK8 3169 aa3.83□□□□□ -1.8
XRCC4-206ENST00000542685 A0A096LNT2 108 aa3.82□□□□□ -1.8
XRCC4-206ENST00000542685 IGHV3OR16-9A0A0B4J2B5 98 aa3.82□□□□□ -1.8
XRCC4-206ENST00000542685 MOBPQ13875 183 aa3.82□□□□□ -1.8
XRCC4-206ENST00000542685 RNASE13Q5GAN3 156 aaKnown RBP3.82□□□□□ -1.8
XRCC4-206ENST00000542685 LINC01558Q9Y6Z2 57 aa3.82□□□□□ -1.8
XRCC4-206ENST00000542685 MYO15AQ9UKN7 3530 aa3.82□□□□□ -1.8
XRCC4-206ENST00000542685 TRIOO75962 3097 aa3.82□□□□□ -1.8
XRCC4-206ENST00000542685 URB1O60287 2271 aaKnown RBP3.82□□□□□ -1.8
XRCC4-206ENST00000542685 DNAH10OSP0CZ25 163 aa3.81□□□□□ -1.8
XRCC4-206ENST00000542685 Q8IZM0 81 aa3.81□□□□□ -1.8
XRCC4-206ENST00000542685 PLAC8Q9NZF1 115 aa3.81□□□□□ -1.8
XRCC4-206ENST00000542685 IGLV4-60A0A075B6I1 120 aa3.8□□□□□ -1.8
XRCC4-206ENST00000542685 IGHV3-73A0A0B4J1V6 119 aa3.8□□□□□ -1.8
XRCC4-206ENST00000542685 A0A1W2PPR1 153 aa3.8□□□□□ -1.8
XRCC4-206ENST00000542685 HIGD2BQ4VC39 106 aa3.8□□□□□ -1.8
XRCC4-206ENST00000542685 COL6A3P12111 3177 aa3.8□□□□□ -1.8
XRCC4-206ENST00000542685 EYSQ5T1H1 3165 aa3.8□□□□□ -1.8
XRCC4-206ENST00000542685 CFAP54Q96N23 3096 aa3.8□□□□□ -1.8
XRCC4-206ENST00000542685 WDR87Q6ZQQ6 2873 aa3.79□□□□□ -1.8
XRCC4-206ENST00000542685 C6orf99Q4VX62 202 aa3.79□□□□□ -1.8
XRCC4-206ENST00000542685 FRYLO94915 3013 aa3.78□□□□□ -1.8
XRCC4-206ENST00000542685 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.78□□□□□ -1.8
XRCC4-206ENST00000542685 LRCOL1A6NCL2 159 aa3.78□□□□□ -1.8
XRCC4-206ENST00000542685 A8MU10 97 aa3.78□□□□□ -1.8
XRCC4-206ENST00000542685 DEFB1P60022 68 aa3.78□□□□□ -1.8
XRCC4-206ENST00000542685 CNBPP62633 177 aaKnown RBP3.78□□□□□ -1.8
XRCC4-206ENST00000542685 SCXQ7RTU7 201 aa3.78□□□□□ -1.8
XRCC4-206ENST00000542685 DEFB123Q8N688 67 aa3.78□□□□□ -1.8
XRCC4-206ENST00000542685 LINC01006Q8NI28 216 aa3.78□□□□□ -1.8
XRCC4-206ENST00000542685 DEFB104AQ8WTQ1 72 aa3.78□□□□□ -1.8
XRCC4-206ENST00000542685 WFDC10AQ9H1F0 79 aa3.78□□□□□ -1.8
XRCC4-206ENST00000542685 CACNA1BQ00975 2339 aa3.77□□□□□ -1.81
XRCC4-206ENST00000542685 PKDREJQ9NTG1 2253 aa3.77□□□□□ -1.81
XRCC4-206ENST00000542685 M0R2N4 97 aa3.77□□□□□ -1.81
XRCC4-206ENST00000542685 SPINK13Q1W4C9 94 aa3.77□□□□□ -1.81
XRCC4-206ENST00000542685 Q6ZQY7 126 aa3.77□□□□□ -1.81
XRCC4-206ENST00000542685 PTPRQQ9UMZ3 2332 aa3.76□□□□□ -1.81
XRCC4-206ENST00000542685 IGLV6-57P01721 117 aa3.76□□□□□ -1.81
XRCC4-206ENST00000542685 IGHV3-11P01762 117 aa3.76□□□□□ -1.81
XRCC4-206ENST00000542685 Q6ZR54 194 aa3.76□□□□□ -1.81
XRCC4-206ENST00000542685 ZDBF2Q9HCK1 2354 aa3.76□□□□□ -1.81
XRCC4-206ENST00000542685 ABCA4P78363 2273 aa3.75□□□□□ -1.81
XRCC4-206ENST00000542685 ZZEF1O43149 2961 aa3.75□□□□□ -1.81
XRCC4-206ENST00000542685 OBSCNQ5VST9 7968 aa3.75□□□□□ -1.81
XRCC4-206ENST00000542685 H3BUX3 64 aa3.75□□□□□ -1.81
XRCC4-206ENST00000542685 INSP01308 110 aa3.75□□□□□ -1.81
XRCC4-206ENST00000542685 SPAG11BQ08648 103 aa3.75□□□□□ -1.81
XRCC4-206ENST00000542685 LCE3AQ5TA76 89 aa3.75□□□□□ -1.81
XRCC4-206ENST00000542685 RETNLBQ9BQ08 111 aa3.75□□□□□ -1.81
XRCC4-206ENST00000542685 TOMM7Q9P0U1 55 aa3.75□□□□□ -1.81
XRCC4-206ENST00000542685 FRYQ5TBA9 3013 aa3.75□□□□□ -1.81
XRCC4-206ENST00000542685 PRUNE2Q8WUY3 3088 aa3.74□□□□□ -1.81
XRCC4-206ENST00000542685 PRR3P79522 188 aaKnown RBP3.74□□□□□ -1.81
XRCC4-206ENST00000542685 VPS13AQ96RL7 3174 aa3.73□□□□□ -1.81
XRCC4-206ENST00000542685 IGKV3-7A0A075B6H7 116 aa3.73□□□□□ -1.81
XRCC4-206ENST00000542685 MSMBP08118 114 aa3.73□□□□□ -1.81
XRCC4-206ENST00000542685 KRTAP13-3Q3SY46 172 aa3.73□□□□□ -1.81
XRCC4-206ENST00000542685 COA5Q86WW8 74 aa3.73□□□□□ -1.81
XRCC4-206ENST00000542685 TRIOBPQ9H2D6 2365 aa3.73□□□□□ -1.81
XRCC4-206ENST00000542685 APC2O95996 2303 aa3.72□□□□□ -1.81
XRCC4-206ENST00000542685 GPR179Q6PRD1 2367 aa3.72□□□□□ -1.81
XRCC4-206ENST00000542685 IGLV5-48A0A075B6I7 105 aa3.72□□□□□ -1.81
XRCC4-206ENST00000542685 C9orf163Q8N9P6 203 aa3.72□□□□□ -1.81
XRCC4-206ENST00000542685 XAGE1AQ9HD64 81 aa3.72□□□□□ -1.81
XRCC4-206ENST00000542685 SPENQ96T58 3664 aaKnown RBP3.72□□□□□ -1.81
XRCC4-206ENST00000542685 OTOGLQ3ZCN5 2332 aa3.72□□□□□ -1.81
XRCC4-206ENST00000542685 WNK2Q9Y3S1 2297 aa3.72□□□□□ -1.81
XRCC4-206ENST00000542685 CFAP47Q6ZTR5 3102 aa3.71□□□□□ -1.82
XRCC4-206ENST00000542685 DOPEY2Q9Y3R5 2298 aa3.71□□□□□ -1.82
XRCC4-206ENST00000542685 IGHV6-1A0A0B4J1U7 121 aa3.71□□□□□ -1.82
XRCC4-206ENST00000542685 B4DSR2 109 aa3.71□□□□□ -1.82
XRCC4-206ENST00000542685 RTL8CO15255 209 aa3.71□□□□□ -1.82
XRCC4-206ENST00000542685 KRTAP1-4P0C5Y4 121 aa3.71□□□□□ -1.82
XRCC4-206ENST00000542685 DEFB131AP59861 70 aa3.71□□□□□ -1.82
XRCC4-206ENST00000542685 BRD3OSQ6XYD6 125 aa3.71□□□□□ -1.82
XRCC4-206ENST00000542685 CELSR3Q9NYQ7 3312 aa3.71□□□□□ -1.82
XRCC4-206ENST00000542685 SPTBN2O15020 2390 aa3.7□□□□□ -1.82
XRCC4-206ENST00000542685 ROS1P08922 2347 aa3.7□□□□□ -1.82
XRCC4-206ENST00000542685 ANKHD1Q8IWZ3 2542 aaKnown RBP3.7□□□□□ -1.82
XRCC4-206ENST00000542685 NBEAQ8NFP9 2946 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms