RNA–Protein interactions for RNA: ENST00000542381.1

SRGAP1-204, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 360 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-204ENST00000542381 RICTORQ6R327 1708 aa0.89□□□□□ -2.27
SRGAP1-204ENST00000542381 KNDC1Q76NI1 1749 aa0.89□□□□□ -2.27
SRGAP1-204ENST00000542381 ANKRD11Q6UB99 2663 aaPredicted RBP0.89□□□□□ -2.27
SRGAP1-204ENST00000542381 USP34Q70CQ2 3546 aa0.89□□□□□ -2.27
SRGAP1-204ENST00000542381 URB1O60287 2271 aaKnown RBP0.89□□□□□ -2.27
SRGAP1-204ENST00000542381 CHD6Q8TD26 2715 aa0.88□□□□□ -2.27
SRGAP1-204ENST00000542381 ABCA2Q9BZC7 2435 aa0.88□□□□□ -2.27
SRGAP1-204ENST00000542381 C5P01031 1676 aa0.88□□□□□ -2.27
SRGAP1-204ENST00000542381 ITSN2Q9NZM3 1697 aa0.88□□□□□ -2.27
SRGAP1-204ENST00000542381 ATP10BO94823 1461 aa0.88□□□□□ -2.27
SRGAP1-204ENST00000542381 A0A087WVE0 104 aa0.88□□□□□ -2.27
SRGAP1-204ENST00000542381 TRBV6-1A0A0K0K1D8 114 aa0.88□□□□□ -2.27
SRGAP1-204ENST00000542381 SYS1-DBNDD2H3BUS1 97 aa0.88□□□□□ -2.27
SRGAP1-204ENST00000542381 ZFYVE26Q68DK2 2539 aa0.88□□□□□ -2.27
SRGAP1-204ENST00000542381 ACACBO00763 2458 aa0.88□□□□□ -2.27
SRGAP1-204ENST00000542381 FAM186AA6NE01 2351 aa0.88□□□□□ -2.27
SRGAP1-204ENST00000542381 ASPMQ8IZT6 3477 aa0.87□□□□□ -2.27
SRGAP1-204ENST00000542381 ERVK-7P63135 1459 aa0.87□□□□□ -2.27
SRGAP1-204ENST00000542381 C1orf167Q5SNV9 1468 aa0.87□□□□□ -2.27
SRGAP1-204ENST00000542381 MYO18BQ8IUG5 2567 aa0.87□□□□□ -2.27
SRGAP1-204ENST00000542381 C5orf42Q9H799 3197 aa0.87□□□□□ -2.27
SRGAP1-204ENST00000542381 RIF1Q5UIP0 2472 aaKnown RBP0.87□□□□□ -2.27
SRGAP1-204ENST00000542381 AHNAKQ09666 5890 aaKnown RBP0.87□□□□□ -2.27
SRGAP1-204ENST00000542381 C7orf77A4D0Y5 90 aa0.87□□□□□ -2.27
SRGAP1-204ENST00000542381 KRTAP2-3P0C7H8 128 aa0.87□□□□□ -2.27
SRGAP1-204ENST00000542381 TDRG1Q3Y452 100 aa0.87□□□□□ -2.27
SRGAP1-204ENST00000542381 LINC01600Q96MT4 127 aa0.87□□□□□ -2.27
SRGAP1-204ENST00000542381 SMR3AQ99954 134 aa0.87□□□□□ -2.27
SRGAP1-204ENST00000542381 KRTAP2-4Q9BYR9 128 aa0.87□□□□□ -2.27
SRGAP1-204ENST00000542381 KRTAP2-1Q9BYU5 128 aa0.87□□□□□ -2.27
SRGAP1-204ENST00000542381 KDM5DQ9BY66 1539 aa0.87□□□□□ -2.27
SRGAP1-204ENST00000542381 UACAQ9BZF9 1416 aa0.87□□□□□ -2.27
SRGAP1-204ENST00000542381 IQGAP1P46940 1657 aa0.87□□□□□ -2.27
SRGAP1-204ENST00000542381 ZC3H13Q5T200 1668 aaKnown RBP0.87□□□□□ -2.27
SRGAP1-204ENST00000542381 WDFY4Q6ZS81 3184 aa0.87□□□□□ -2.27
SRGAP1-204ENST00000542381 XRN1Q8IZH2 1706 aaKnown RBP0.86□□□□□ -2.27
SRGAP1-204ENST00000542381 PTPN23Q9H3S7 1636 aa0.86□□□□□ -2.27
SRGAP1-204ENST00000542381 CREBBPQ92793 2442 aa0.86□□□□□ -2.27
SRGAP1-204ENST00000542381 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.86□□□□□ -2.27
SRGAP1-204ENST00000542381 HTTP42858 3142 aa0.86□□□□□ -2.27
SRGAP1-204ENST00000542381 TRBV25-1A0A075B6N4 114 aa0.86□□□□□ -2.27
SRGAP1-204ENST00000542381 UQCRHLA0A096LP55 91 aa0.86□□□□□ -2.27
SRGAP1-204ENST00000542381 H3BQF6 201 aa0.86□□□□□ -2.27
SRGAP1-204ENST00000542381 PRO3102Q9H379 93 aa0.86□□□□□ -2.27
SRGAP1-204ENST00000542381 TP53AIP1Q9HCN2 124 aa0.86□□□□□ -2.27
SRGAP1-204ENST00000542381 PIEZO2Q9H5I5 2752 aa0.86□□□□□ -2.27
SRGAP1-204ENST00000542381 RELNP78509 3460 aa0.86□□□□□ -2.27
SRGAP1-204ENST00000542381 DNMBPQ6XZF7 1577 aa0.86□□□□□ -2.27
SRGAP1-204ENST00000542381 MAST1Q9Y2H9 1570 aa0.86□□□□□ -2.27
SRGAP1-204ENST00000542381 GCN1Q92616 2671 aaKnown RBP0.86□□□□□ -2.27
SRGAP1-204ENST00000542381 XIRP2A4UGR9 3374 aa0.86□□□□□ -2.27
SRGAP1-204ENST00000542381 MYO5CQ9NQX4 1742 aa0.86□□□□□ -2.27
SRGAP1-204ENST00000542381 SPEGQ15772 3267 aa0.86□□□□□ -2.27
SRGAP1-204ENST00000542381 ZNF292O60281 2723 aa0.86□□□□□ -2.27
SRGAP1-204ENST00000542381 PAPPAQ13219 1627 aa0.86□□□□□ -2.27
SRGAP1-204ENST00000542381 DNAH14Q0VDD8 3507 aa0.85□□□□□ -2.27
SRGAP1-204ENST00000542381 NCOR2Q9Y618 2525 aa0.85□□□□□ -2.27
SRGAP1-204ENST00000542381 NBPF19A0A087WUL8 3843 aa0.85□□□□□ -2.27
SRGAP1-204ENST00000542381 PLIN4Q96Q06 1357 aa0.85□□□□□ -2.27
SRGAP1-204ENST00000542381 ABCC1P33527 1531 aa0.85□□□□□ -2.27
SRGAP1-204ENST00000542381 SPG11Q96JI7 2443 aa0.85□□□□□ -2.27
SRGAP1-204ENST00000542381 FXYD6-FXYD2A0A087WZ82 144 aa0.85□□□□□ -2.27
SRGAP1-204ENST00000542381 SMIM5Q71RC9 77 aa0.85□□□□□ -2.27
SRGAP1-204ENST00000542381 PCNX1Q96RV3 2341 aa0.85□□□□□ -2.27
SRGAP1-204ENST00000542381 CFAP74Q9C0B2 1584 aa0.85□□□□□ -2.27
SRGAP1-204ENST00000542381 FMN2Q9NZ56 1722 aa0.85□□□□□ -2.27
SRGAP1-204ENST00000542381 CNOT1A5YKK6 2376 aaKnown RBP0.85□□□□□ -2.27
SRGAP1-204ENST00000542381 COL14A1Q05707 1796 aaKnown RBP0.85□□□□□ -2.27
SRGAP1-204ENST00000542381 PREX2Q70Z35 1606 aa0.85□□□□□ -2.27
SRGAP1-204ENST00000542381 CROCC2H7BZ55 1655 aa0.84□□□□□ -2.27
SRGAP1-204ENST00000542381 SPTAN1Q13813 2472 aaKnown RBP0.84□□□□□ -2.27
SRGAP1-204ENST00000542381 TULP4Q9NRJ4 1543 aa0.84□□□□□ -2.27
SRGAP1-204ENST00000542381 SPTBN1Q01082 2364 aaKnown RBP0.84□□□□□ -2.27
SRGAP1-204ENST00000542381 ITSN1Q15811 1721 aa0.84□□□□□ -2.27
SRGAP1-204ENST00000542381 EDC4Q6P2E9 1401 aaKnown RBP0.84□□□□□ -2.27
SRGAP1-204ENST00000542381 PEA15Q15121 130 aa0.84□□□□□ -2.27
SRGAP1-204ENST00000542381 HIGD1BQ9P298 99 aa0.84□□□□□ -2.27
SRGAP1-204ENST00000542381 CELSR3Q9NYQ7 3312 aa0.84□□□□□ -2.27
SRGAP1-204ENST00000542381 IQGAP3Q86VI3 1631 aa0.84□□□□□ -2.28
SRGAP1-204ENST00000542381 USP32Q8NFA0 1604 aa0.84□□□□□ -2.28
SRGAP1-204ENST00000542381 CCDC88BA6NC98 1476 aa0.84□□□□□ -2.28
SRGAP1-204ENST00000542381 LRRC9Q6ZRR7 1453 aa0.84□□□□□ -2.28
SRGAP1-204ENST00000542381 PTPRQQ9UMZ3 2332 aa0.83□□□□□ -2.28
SRGAP1-204ENST00000542381 RRBP1Q9P2E9 1410 aaKnown RBP0.83□□□□□ -2.28
SRGAP1-204ENST00000542381 DEPDC5O75140 1603 aa0.83□□□□□ -2.28
SRGAP1-204ENST00000542381 GVINP1Q7Z2Y8 2422 aa0.83□□□□□ -2.28
SRGAP1-204ENST00000542381 BPTFQ12830 3046 aa0.83□□□□□ -2.28
SRGAP1-204ENST00000542381 CYB5AP00167 134 aa0.83□□□□□ -2.28
SRGAP1-204ENST00000542381 Q8IZM0 81 aa0.83□□□□□ -2.28
SRGAP1-204ENST00000542381 S100A16Q96FQ6 103 aaKnown RBP0.83□□□□□ -2.28
SRGAP1-204ENST00000542381 CELSR2Q9HCU4 2923 aa0.83□□□□□ -2.28
SRGAP1-204ENST00000542381 AKAP6Q13023 2319 aa0.83□□□□□ -2.28
SRGAP1-204ENST00000542381 EFCAB5A4FU69 1503 aa0.83□□□□□ -2.28
SRGAP1-204ENST00000542381 BCORQ6W2J9 1755 aa0.83□□□□□ -2.28
SRGAP1-204ENST00000542381 DMDP11532 3685 aa0.83□□□□□ -2.28
SRGAP1-204ENST00000542381 ADAMTS12P58397 1594 aa0.83□□□□□ -2.28
SRGAP1-204ENST00000542381 ABCC8Q09428 1581 aa0.83□□□□□ -2.28
SRGAP1-204ENST00000542381 TIAM1Q13009 1591 aa0.83□□□□□ -2.28
SRGAP1-204ENST00000542381 REV3LO60673 3130 aa0.82□□□□□ -2.28
SRGAP1-204ENST00000542381 ABCA5Q8WWZ7 1642 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms