RNA–Protein interactions for RNA: ENST00000540785.1

CARS2-223, Transcript of cysteinyl-tRNA synthetase 2, mitochondrial, human

TSL 3

Gene CARS2, Length 301 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CARS2-223	ENST00000540785	UNC79	Q9P2D8	2635 aa		0.34	□□□□□ -2.36
CARS2-223	ENST00000540785	SUPT6H	Q7KZ85	1726 aa	Known RBP	0.33	□□□□□ -2.36
CARS2-223	ENST00000540785	SYNE1	Q8NF91	8797 aa	Known RBP	0.33	□□□□□ -2.36
CARS2-223	ENST00000540785	COL14A1	Q05707	1796 aa	Known RBP	0.33	□□□□□ -2.36
CARS2-223	ENST00000540785	CPSF4L	A6NMK7	179 aa	Known RBP	0.33	□□□□□ -2.36
CARS2-223	ENST00000540785	LINC00643	Q86TS7	51 aa		0.33	□□□□□ -2.36
CARS2-223	ENST00000540785	GVINP1	Q7Z2Y8	2422 aa		0.32	□□□□□ -2.36
CARS2-223	ENST00000540785	KANTR	A0A1W2PQU2	76 aa		0.32	□□□□□ -2.36
CARS2-223	ENST00000540785	DEFB105A	Q8NG35	78 aa		0.32	□□□□□ -2.36
CARS2-223	ENST00000540785	APLN	Q9ULZ1	77 aa		0.32	□□□□□ -2.36
CARS2-223	ENST00000540785	NKTR	P30414	1462 aa	Known RBP	0.32	□□□□□ -2.36
CARS2-223	ENST00000540785	ATP7B	P35670	1465 aa		0.32	□□□□□ -2.36
CARS2-223	ENST00000540785	NCOR2	Q9Y618	2525 aa		0.32	□□□□□ -2.36
CARS2-223	ENST00000540785	LRRC7	Q96NW7	1537 aa		0.32	□□□□□ -2.36
CARS2-223	ENST00000540785	MED14	O60244	1454 aa		0.31	□□□□□ -2.36
CARS2-223	ENST00000540785	CEBPZOS	A8MTT3	80 aa		0.31	□□□□□ -2.36
CARS2-223	ENST00000540785	SPINK4	O60575	86 aa		0.31	□□□□□ -2.36
CARS2-223	ENST00000540785	ACYP1	P07311	99 aa		0.31	□□□□□ -2.36
CARS2-223	ENST00000540785	KLK9	Q2XQG4	91 aa		0.31	□□□□□ -2.36
CARS2-223	ENST00000540785	TDRG1	Q3Y452	100 aa		0.31	□□□□□ -2.36
CARS2-223	ENST00000540785	S100A13	Q99584	98 aa		0.31	□□□□□ -2.36
CARS2-223	ENST00000540785	TMEM131L	A2VDJ0	1609 aa		0.31	□□□□□ -2.36
CARS2-223	ENST00000540785	MAGI2	Q86UL8	1455 aa		0.3	□□□□□ -2.36
CARS2-223	ENST00000540785	OTOG	Q6ZRI0	2925 aa		0.3	□□□□□ -2.36
CARS2-223	ENST00000540785	GAFA1	Q96PS6	74 aa		0.3	□□□□□ -2.36
CARS2-223	ENST00000540785	NCOR1	O75376	2440 aa		0.3	□□□□□ -2.36
CARS2-223	ENST00000540785	CSMD3	Q7Z407	3707 aa		0.29	□□□□□ -2.36
CARS2-223	ENST00000540785	FAT4	Q6V0I7	4981 aa		0.29	□□□□□ -2.36
CARS2-223	ENST00000540785	MAST4	O15021	2626 aa		0.29	□□□□□ -2.36
CARS2-223	ENST00000540785	COX7B	P24311	80 aa		0.29	□□□□□ -2.36
CARS2-223	ENST00000540785	RPL38	P63173	70 aa	Known RBP	0.29	□□□□□ -2.36
CARS2-223	ENST00000540785	ADIRF	Q15847	76 aa		0.29	□□□□□ -2.36
CARS2-223	ENST00000540785	MRPL34	Q9BQ48	92 aa	Known RBP	0.29	□□□□□ -2.36
CARS2-223	ENST00000540785	QSER1	Q2KHR3	1735 aa		0.29	□□□□□ -2.36
CARS2-223	ENST00000540785	RGPD2	P0DJD1	1756 aa		0.29	□□□□□ -2.36
CARS2-223	ENST00000540785	UBR3	Q6ZT12	1888 aa		0.29	□□□□□ -2.36
CARS2-223	ENST00000540785	LRRC9	Q6ZRR7	1453 aa		0.29	□□□□□ -2.36
CARS2-223	ENST00000540785	PTPN13	Q12923	2485 aa		0.28	□□□□□ -2.36
CARS2-223	ENST00000540785	IGSF10	Q6WRI0	2623 aa		0.28	□□□□□ -2.36
CARS2-223	ENST00000540785	RGPD1	P0DJD0	1748 aa		0.28	□□□□□ -2.36
CARS2-223	ENST00000540785	UBR5	O95071	2799 aa	Predicted RBP	0.28	□□□□□ -2.36
CARS2-223	ENST00000540785	LOC730098	B7Z3J9	87 aa		0.28	□□□□□ -2.36
CARS2-223	ENST00000540785	PHGR1	C9JFL3	82 aa		0.28	□□□□□ -2.36
CARS2-223	ENST00000540785	CCL22	O00626	93 aa		0.28	□□□□□ -2.36
CARS2-223	ENST00000540785	WFDC9	Q8NEX5	89 aa		0.28	□□□□□ -2.36
CARS2-223	ENST00000540785	ST20	Q9HBF5	79 aa		0.28	□□□□□ -2.36
CARS2-223	ENST00000540785	LRP1	Q07954	4544 aa	Known RBP	0.28	□□□□□ -2.37
CARS2-223	ENST00000540785	CHD6	Q8TD26	2715 aa		0.28	□□□□□ -2.37
CARS2-223	ENST00000540785	HIVEP3	Q5T1R4	2406 aa		0.27	□□□□□ -2.37
CARS2-223	ENST00000540785	BCOR	Q6W2J9	1755 aa		0.27	□□□□□ -2.37
CARS2-223	ENST00000540785	HEPN1	Q6WQI6	88 aa		0.27	□□□□□ -2.37
CARS2-223	ENST00000540785	CLIP1	P30622	1438 aa		0.27	□□□□□ -2.37
CARS2-223	ENST00000540785	DCAF1	Q9Y4B6	1507 aa		0.27	□□□□□ -2.37
CARS2-223	ENST00000540785	TRAV21	A0A0B4J279	112 aa		0.26	□□□□□ -2.37
CARS2-223	ENST00000540785	H1FX-AS1	Q4G0G2	97 aa		0.26	□□□□□ -2.37
CARS2-223	ENST00000540785	URB2	Q14146	1524 aa	Known RBP	0.26	□□□□□ -2.37
CARS2-223	ENST00000540785	SCRIB	Q14160	1630 aa		0.26	□□□□□ -2.37
CARS2-223	ENST00000540785	WNK2	Q9Y3S1	2297 aa		0.26	□□□□□ -2.37
CARS2-223	ENST00000540785	DIP2B	Q9P265	1576 aa		0.25	□□□□□ -2.37
CARS2-223	ENST00000540785	ERVK-7	P63135	1459 aa		0.25	□□□□□ -2.37
CARS2-223	ENST00000540785	ARHGAP35	Q9NRY4	1499 aa		0.25	□□□□□ -2.37
CARS2-223	ENST00000540785	NDUFB1	O75438	58 aa		0.25	□□□□□ -2.37
CARS2-223	ENST00000540785	ABCA2	Q9BZC7	2435 aa		0.25	□□□□□ -2.37
CARS2-223	ENST00000540785	LTN1	O94822	1766 aa		0.24	□□□□□ -2.37
CARS2-223	ENST00000540785	PREX1	Q8TCU6	1659 aa		0.24	□□□□□ -2.37
CARS2-223	ENST00000540785	SPTA1	P02549	2419 aa		0.24	□□□□□ -2.37
CARS2-223	ENST00000540785	VWF	P04275	2813 aa		0.24	□□□□□ -2.37
CARS2-223	ENST00000540785	TENM4	Q6N022	2769 aa		0.24	□□□□□ -2.37
CARS2-223	ENST00000540785	POLR1A	O95602	1720 aa	Predicted RBP	0.24	□□□□□ -2.37
CARS2-223	ENST00000540785	PIK3C2B	O00750	1634 aa		0.24	□□□□□ -2.37
CARS2-223	ENST00000540785	MUC5B	Q9HC84	5762 aa	Predicted RBP	0.23	□□□□□ -2.37
CARS2-223	ENST00000540785	NCOA2	Q15596	1464 aa		0.23	□□□□□ -2.37
CARS2-223	ENST00000540785	HRNR	Q86YZ3	2850 aa	Predicted RBP	0.23	□□□□□ -2.37
CARS2-223	ENST00000540785	CSPG4	Q6UVK1	2322 aa		0.23	□□□□□ -2.37
CARS2-223	ENST00000540785		H3BUT2	72 aa		0.23	□□□□□ -2.37
CARS2-223	ENST00000540785	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	0.23	□□□□□ -2.37
CARS2-223	ENST00000540785	KDM5D	Q9BY66	1539 aa		0.23	□□□□□ -2.37
CARS2-223	ENST00000540785	ATR	Q13535	2644 aa		0.22	□□□□□ -2.37
CARS2-223	ENST00000540785		A0A087WXM4	84 aa		0.22	□□□□□ -2.37
CARS2-223	ENST00000540785	ATP5EP2	Q5VTU8	51 aa		0.22	□□□□□ -2.37
CARS2-223	ENST00000540785	CDKN2A-AS1	Q9UH64	79 aa		0.22	□□□□□ -2.37
CARS2-223	ENST00000540785	USP32	Q8NFA0	1604 aa		0.22	□□□□□ -2.37
CARS2-223	ENST00000540785	DMBT1	Q9UGM3	2413 aa	Predicted RBP	0.22	□□□□□ -2.37
CARS2-223	ENST00000540785	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	0.21	□□□□□ -2.38	4e-15	■■■■■ 30.4
CARS2-223	ENST00000540785	ABCC1	P33527	1531 aa		0.21	□□□□□ -2.38
CARS2-223	ENST00000540785	RGPD8	O14715	1765 aa	Predicted RBP	0.21	□□□□□ -2.38
CARS2-223	ENST00000540785	RGPD5	Q99666	1765 aa		0.21	□□□□□ -2.38
CARS2-223	ENST00000540785	TIAM2	Q8IVF5	1701 aa		0.21	□□□□□ -2.38
CARS2-223	ENST00000540785	CELSR1	Q9NYQ6	3014 aa		0.21	□□□□□ -2.38
CARS2-223	ENST00000540785	HMCN1	Q96RW7	5635 aa		0.2	□□□□□ -2.38
CARS2-223	ENST00000540785	MAGI3	Q5TCQ9	1506 aa		0.2	□□□□□ -2.38
CARS2-223	ENST00000540785	PRM1	P04553	51 aa		0.2	□□□□□ -2.38
CARS2-223	ENST00000540785	BVES-AS1	Q5T3Y7	98 aa		0.2	□□□□□ -2.38
CARS2-223	ENST00000540785	LELP1	Q5T871	98 aa		0.2	□□□□□ -2.38
CARS2-223	ENST00000540785	ZNF831	Q5JPB2	1677 aa		0.2	□□□□□ -2.38
CARS2-223	ENST00000540785	CACNA1A	O00555	2505 aa		0.2	□□□□□ -2.38
CARS2-223	ENST00000540785	HUWE1	Q7Z6Z7	4374 aa	Known RBP	0.2	□□□□□ -2.38
CARS2-223	ENST00000540785	DOT1L	Q8TEK3	1739 aa		0.19	□□□□□ -2.38
CARS2-223	ENST00000540785	TNRC6C	Q9HCJ0	1690 aa	Known RBP	0.19	□□□□□ -2.38
CARS2-223	ENST00000540785	UMAD1	C9J7I0	102 aa		0.19	□□□□□ -2.38

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