RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 IGLC3P0DOY3 106 aa-0.26□□□□□ -2.45
CCDC7-209ENST00000539197 SPRR2BP35325 72 aa-0.26□□□□□ -2.45
CCDC7-209ENST00000539197 MUSTN1Q8IVN3 82 aa-0.26□□□□□ -2.45
CCDC7-209ENST00000539197 COL6A3P12111 3177 aa-0.27□□□□□ -2.45
CCDC7-209ENST00000539197 NUP188Q5SRE5 1749 aa-0.27□□□□□ -2.45
CCDC7-209ENST00000539197 TENM2Q9NT68 2774 aa-0.27□□□□□ -2.45
CCDC7-209ENST00000539197 CCDC141Q6ZP82 1450 aa-0.27□□□□□ -2.45
CCDC7-209ENST00000539197 FYCO1Q9BQS8 1478 aa-0.27□□□□□ -2.45
CCDC7-209ENST00000539197 WNK1Q9H4A3 2382 aa-0.27□□□□□ -2.45
CCDC7-209ENST00000539197 LEPROTL1O95214 131 aa-0.27□□□□□ -2.45
CCDC7-209ENST00000539197 HMGN3Q15651 99 aa-0.27□□□□□ -2.45
CCDC7-209ENST00000539197 ZNF720Q7Z2F6 126 aa-0.27□□□□□ -2.45
CCDC7-209ENST00000539197 SNHG12Q9BXW3 62 aa-0.27□□□□□ -2.45
CCDC7-209ENST00000539197 HIGD1BQ9P298 99 aa-0.27□□□□□ -2.45
CCDC7-209ENST00000539197 DOPEY1Q5JWR5 2465 aa-0.27□□□□□ -2.45
CCDC7-209ENST00000539197 KNDC1Q76NI1 1749 aa-0.27□□□□□ -2.45
CCDC7-209ENST00000539197 ABCA3Q99758 1704 aa-0.27□□□□□ -2.45
CCDC7-209ENST00000539197 FMN2Q9NZ56 1722 aa-0.27□□□□□ -2.45
CCDC7-209ENST00000539197 ZANQ9Y493 2812 aa-0.28□□□□□ -2.45
CCDC7-209ENST00000539197 DEFB112Q30KQ8 113 aa-0.28□□□□□ -2.45
CCDC7-209ENST00000539197 LELP1Q5T871 98 aa-0.28□□□□□ -2.45
CCDC7-209ENST00000539197 MRPL34Q9BQ48 92 aaKnown RBP-0.28□□□□□ -2.45
CCDC7-209ENST00000539197 DNAJC13O75165 2243 aa-0.28□□□□□ -2.45
CCDC7-209ENST00000539197 LRP1BQ9NZR2 4599 aa-0.28□□□□□ -2.45
CCDC7-209ENST00000539197 RYR1P21817 5038 aa-0.28□□□□□ -2.45
CCDC7-209ENST00000539197 HYDINQ4G0P3 5121 aa-0.28□□□□□ -2.45
CCDC7-209ENST00000539197 ABCC10Q5T3U5 1492 aa-0.29□□□□□ -2.46
CCDC7-209ENST00000539197 KIAA1109Q2LD37 5005 aa-0.29□□□□□ -2.46
CCDC7-209ENST00000539197 SPTY2D1-AS1A0A0U1RR47 76 aa-0.29□□□□□ -2.46
CCDC7-209ENST00000539197 PDCD11Q14690 1871 aaKnown RBP-0.29□□□□□ -2.46
CCDC7-209ENST00000539197 USH2AO75445 5202 aa-0.3□□□□□ -2.46
CCDC7-209ENST00000539197 MARF1Q9Y4F3 1742 aaKnown RBP-0.3□□□□□ -2.46
CCDC7-209ENST00000539197 ACANP16112 2415 aa-0.3□□□□□ -2.46
CCDC7-209ENST00000539197 S100A8P05109 93 aa-0.3□□□□□ -2.46
CCDC7-209ENST00000539197 PKIAP61925 76 aa-0.3□□□□□ -2.46
CCDC7-209ENST00000539197 ALKAL2Q6UX46 152 aa-0.3□□□□□ -2.46
CCDC7-209ENST00000539197 HEPN1Q6WQI6 88 aa-0.3□□□□□ -2.46
CCDC7-209ENST00000539197 ABCC2Q92887 1545 aa-0.3□□□□□ -2.46
CCDC7-209ENST00000539197 PAPPA2Q9BXP8 1791 aa-0.3□□□□□ -2.46
CCDC7-209ENST00000539197 IQSEC2Q5JU85 1478 aa-0.3□□□□□ -2.46
CCDC7-209ENST00000539197 TARBP1Q13395 1621 aaKnown RBP-0.31□□□□□ -2.46
CCDC7-209ENST00000539197 SAMD9Q5K651 1589 aa-0.31□□□□□ -2.46
CCDC7-209ENST00000539197 C20orf78Q9BR46 151 aa-0.31□□□□□ -2.46
CCDC7-209ENST00000539197 FLNBO75369 2602 aaKnown RBP-0.32□□□□□ -2.46
CCDC7-209ENST00000539197 EPPK1P58107 5090 aaKnown RBP-0.32□□□□□ -2.46
CCDC7-209ENST00000539197 DEFB135Q30KP9 77 aa-0.32□□□□□ -2.46
CCDC7-209ENST00000539197 UBE2D4Q9Y2X8 147 aa-0.32□□□□□ -2.46
CCDC7-209ENST00000539197 SRRM2Q9UQ35 2752 aaKnown RBP-0.32□□□□□ -2.46
CCDC7-209ENST00000539197 VPS8Q8N3P4 1428 aa-0.32□□□□□ -2.46
CCDC7-209ENST00000539197 CUX1P39880 1505 aa-0.33□□□□□ -2.46
CCDC7-209ENST00000539197 CCL22O00626 93 aa-0.33□□□□□ -2.46
CCDC7-209ENST00000539197 GYPAP02724 150 aa-0.33□□□□□ -2.46
CCDC7-209ENST00000539197 CNOT1A5YKK6 2376 aaKnown RBP-0.34□□□□□ -2.46
CCDC7-209ENST00000539197 MAP1AP78559 2803 aaPredicted RBP-0.34□□□□□ -2.46
CCDC7-209ENST00000539197 HMGN2P05204 90 aaKnown RBP-0.34□□□□□ -2.46
CCDC7-209ENST00000539197 KRTAP19-7Q3SYF9 63 aa-0.34□□□□□ -2.46
CCDC7-209ENST00000539197 C9orf62Q8N4C0 152 aa-0.34□□□□□ -2.46
CCDC7-209ENST00000539197 CDKN2A-AS1Q9UH64 79 aa-0.34□□□□□ -2.46
CCDC7-209ENST00000539197 SPTBN4Q9H254 2564 aa-0.34□□□□□ -2.46
CCDC7-209ENST00000539197 PKHD1P08F94 4074 aa-0.34□□□□□ -2.46
CCDC7-209ENST00000539197 CLIP1P30622 1438 aa-0.35□□□□□ -2.47
CCDC7-209ENST00000539197 WFDC13Q8IUB5 93 aa-0.35□□□□□ -2.47
CCDC7-209ENST00000539197 SHPRHQ149N8 1683 aa-0.35□□□□□ -2.47
CCDC7-209ENST00000539197 LRRC37AA6NMS7 1700 aa-0.35□□□□□ -2.47
CCDC7-209ENST00000539197 REV3LO60673 3130 aa-0.35□□□□□ -2.47
CCDC7-209ENST00000539197 HERC2O95714 4834 aa-0.36□□□□□ -2.47
CCDC7-209ENST00000539197 EPRSP07814 1512 aaKnown RBP-0.36□□□□□ -2.47
CCDC7-209ENST00000539197 COX7BP24311 80 aa-0.36□□□□□ -2.47
CCDC7-209ENST00000539197 SMIM11AP58511 58 aa-0.36□□□□□ -2.47
CCDC7-209ENST00000539197 PEA15Q15121 130 aa-0.36□□□□□ -2.47
CCDC7-209ENST00000539197 NMSQ5H8A3 153 aa-0.36□□□□□ -2.47
CCDC7-209ENST00000539197 HIVEP1P15822 2718 aa-0.36□□□□□ -2.47
CCDC7-209ENST00000539197 ATP10BO94823 1461 aa-0.36□□□□□ -2.47
CCDC7-209ENST00000539197 MAGI2Q86UL8 1455 aa-0.36□□□□□ -2.47
CCDC7-209ENST00000539197 PDZD2O15018 2839 aa-0.37□□□□□ -2.47
CCDC7-209ENST00000539197 ABCA13Q86UQ4 5058 aa-0.37□□□□□ -2.47
CCDC7-209ENST00000539197 KRTAP6-2Q3LI66 62 aa-0.37□□□□□ -2.47
CCDC7-209ENST00000539197 FANCAO15360 1455 aa-0.37□□□□□ -2.47
CCDC7-209ENST00000539197 PCNX1Q96RV3 2341 aa-0.37□□□□□ -2.47
CCDC7-209ENST00000539197 C5P01031 1676 aa-0.37□□□□□ -2.47
CCDC7-209ENST00000539197 SVEP1Q4LDE5 3571 aa-0.37□□□□□ -2.47
CCDC7-209ENST00000539197 NEXMIFQ5QGS0 1516 aa-0.38□□□□□ -2.47
CCDC7-209ENST00000539197 MON2Q7Z3U7 1717 aa-0.38□□□□□ -2.47
CCDC7-209ENST00000539197 A0A1B0GUT8 65 aa-0.38□□□□□ -2.47
CCDC7-209ENST00000539197 IQCF6A8MYZ5 107 aa-0.38□□□□□ -2.47
CCDC7-209ENST00000539197 PLGLAQ15195 96 aa-0.38□□□□□ -2.47
CCDC7-209ENST00000539197 GAFA1Q96PS6 74 aa-0.38□□□□□ -2.47
CCDC7-209ENST00000539197 Q9H521 79 aa-0.38□□□□□ -2.47
CCDC7-209ENST00000539197 NBEAL1Q6ZS30 2694 aa-0.38□□□□□ -2.47
CCDC7-209ENST00000539197 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.38□□□□□ -2.47
CCDC7-209ENST00000539197 FLGP20930 4061 aaPredicted RBP-0.38□□□□□ -2.47
CCDC7-209ENST00000539197 CCNB3Q8WWL7 1395 aa-0.39□□□□□ -2.47
CCDC7-209ENST00000539197 PYY3Q5JQD4 70 aa-0.4□□□□□ -2.47
CCDC7-209ENST00000539197 TEP1Q99973 2627 aaKnown RBP-0.4□□□□□ -2.47
CCDC7-209ENST00000539197 CLTCQ00610 1675 aaKnown RBP-0.4□□□□□ -2.47
CCDC7-209ENST00000539197 TRAV21A0A0B4J279 112 aa-0.41□□□□□ -2.48
CCDC7-209ENST00000539197 K7EP34 96 aa-0.41□□□□□ -2.48
CCDC7-209ENST00000539197 NDUFA3O95167 84 aa-0.41□□□□□ -2.48
CCDC7-209ENST00000539197 CYB5AP00167 134 aa-0.41□□□□□ -2.48
CCDC7-209ENST00000539197 SPRR2AP35326 72 aa-0.41□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms