RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 C6orf226Q5I0X4 101 aa4.31□□□□□ -1.72
YBX3-206ENST00000536823 REG3GQ6UW15 175 aa4.31□□□□□ -1.72
YBX3-206ENST00000536823 KRTAP7-1Q8IUC3 87 aa4.31□□□□□ -1.72
YBX3-206ENST00000536823 LINC01600Q96MT4 127 aa4.31□□□□□ -1.72
YBX3-206ENST00000536823 F8VRH5 84 aa4.3□□□□□ -1.72
YBX3-206ENST00000536823 M0QXV9 152 aa4.3□□□□□ -1.72
YBX3-206ENST00000536823 SNAPINO95295 136 aa4.3□□□□□ -1.72
YBX3-206ENST00000536823 APOC3P02656 99 aa4.3□□□□□ -1.72
YBX3-206ENST00000536823 CXCL5P42830 114 aa4.3□□□□□ -1.72
YBX3-206ENST00000536823 C9orf129Q5T035 196 aaKnown RBP4.3□□□□□ -1.72
YBX3-206ENST00000536823 SVBPQ8N300 66 aa4.3□□□□□ -1.72
YBX3-206ENST00000536823 C18orf32Q8TCD1 76 aa4.3□□□□□ -1.72
YBX3-206ENST00000536823 CST9LQ9H4G1 147 aa4.3□□□□□ -1.72
YBX3-206ENST00000536823 UBR4Q5T4S7 5183 aa4.29□□□□□ -1.72
YBX3-206ENST00000536823 A0A096LNJ9 63 aa4.29□□□□□ -1.72
YBX3-206ENST00000536823 RPL24P83731 157 aaKnown RBP4.29□□□□□ -1.72
YBX3-206ENST00000536823 PMVKQ15126 192 aa4.29□□□□□ -1.72
YBX3-206ENST00000536823 PDZD11Q5EBL8 140 aa4.29□□□□□ -1.72
YBX3-206ENST00000536823 C1orf137Q5JT78 98 aa4.29□□□□□ -1.72
YBX3-206ENST00000536823 KRTAP11-1Q8IUC1 163 aa4.29□□□□□ -1.72
YBX3-206ENST00000536823 TRAPPC1Q9Y5R8 145 aa4.29□□□□□ -1.72
YBX3-206ENST00000536823 HBDP02042 147 aa4.28□□□□□ -1.72
YBX3-206ENST00000536823 IGLV7-43P04211 117 aa4.28□□□□□ -1.72
YBX3-206ENST00000536823 SPINK8P0C7L1 97 aa4.28□□□□□ -1.72
YBX3-206ENST00000536823 IGLC3P0DOY3 106 aa4.28□□□□□ -1.72
YBX3-206ENST00000536823 KRTAP10-8P60410 259 aa4.28□□□□□ -1.72
YBX3-206ENST00000536823 UBE2BP63146 152 aa4.28□□□□□ -1.72
YBX3-206ENST00000536823 COX7B2Q8TF08 81 aa4.28□□□□□ -1.72
YBX3-206ENST00000536823 YPEL4Q96NS1 127 aa4.28□□□□□ -1.72
YBX3-206ENST00000536823 H3BRM9 83 aa4.27□□□□□ -1.73
YBX3-206ENST00000536823 LINC00614P0C842 121 aa4.27□□□□□ -1.73
YBX3-206ENST00000536823 DIRC1Q969H9 104 aa4.27□□□□□ -1.73
YBX3-206ENST00000536823 XAGE1AQ9HD64 81 aa4.27□□□□□ -1.73
YBX3-206ENST00000536823 LRP2P98164 4655 aa4.27□□□□□ -1.73
YBX3-206ENST00000536823 H0Y9J4 135 aa4.26□□□□□ -1.73
YBX3-206ENST00000536823 ATP5LO75964 103 aa4.26□□□□□ -1.73
YBX3-206ENST00000536823 ZNF22P17026 224 aaPredicted RBP4.26□□□□□ -1.73
YBX3-206ENST00000536823 RAB5BP61020 215 aa4.26□□□□□ -1.73
YBX3-206ENST00000536823 PMCHL1Q16048 86 aa4.26□□□□□ -1.73
YBX3-206ENST00000536823 TP73-AS1Q9UF72 201 aa4.26□□□□□ -1.73
YBX3-206ENST00000536823 NDUFA6P56556 154 aa4.25□□□□□ -1.73
YBX3-206ENST00000536823 LBHQ53QV2 105 aaPredicted RBP4.25□□□□□ -1.73
YBX3-206ENST00000536823 C22orf24Q9Y442 160 aa4.25□□□□□ -1.73
YBX3-206ENST00000536823 C11orf86A6NJI1 115 aa4.24□□□□□ -1.73
YBX3-206ENST00000536823 NUPR1O60356 82 aa4.24□□□□□ -1.73
YBX3-206ENST00000536823 MRPL55Q7Z7F7 128 aaKnown RBP4.24□□□□□ -1.73
YBX3-206ENST00000536823 BAGE3Q86Y29 109 aa4.24□□□□□ -1.73
YBX3-206ENST00000536823 CBLN2Q8IUK8 224 aa4.24□□□□□ -1.73
YBX3-206ENST00000536823 KRTAP1-4P0C5Y4 121 aa4.23□□□□□ -1.73
YBX3-206ENST00000536823 CHCHD1Q96BP2 118 aaKnown RBP4.23□□□□□ -1.73
YBX3-206ENST00000536823 IGLV1-50A0A075B6I6 118 aa4.22□□□□□ -1.73
YBX3-206ENST00000536823 TRAV12-1A0A0B4J245 112 aa4.22□□□□□ -1.73
YBX3-206ENST00000536823 ZNF861PO60384 105 aa4.22□□□□□ -1.73
YBX3-206ENST00000536823 TMEM170BQ5T4T1 132 aa4.22□□□□□ -1.73
YBX3-206ENST00000536823 SFTA2Q6UW10 78 aa4.22□□□□□ -1.73
YBX3-206ENST00000536823 NKAPP1Q8N9T2 125 aa4.22□□□□□ -1.73
YBX3-206ENST00000536823 IFI27L1Q96BM0 104 aa4.22□□□□□ -1.73
YBX3-206ENST00000536823 LINC00167Q96N53 147 aa4.22□□□□□ -1.73
YBX3-206ENST00000536823 CHTOPQ9Y3Y2 248 aaKnown RBP4.22□□□□□ -1.73
YBX3-206ENST00000536823 OBSCNQ5VST9 7968 aa4.21□□□□□ -1.73
YBX3-206ENST00000536823 BCE1O60756 84 aa4.21□□□□□ -1.74
YBX3-206ENST00000536823 PFN2P35080 140 aa4.21□□□□□ -1.74
YBX3-206ENST00000536823 ZNF625Q96I27 306 aaPredicted RBP4.21□□□□□ -1.74
YBX3-206ENST00000536823 ERG28Q9UKR5 140 aa4.21□□□□□ -1.74
YBX3-206ENST00000536823 RPL37AP8A6NKH3 93 aa4.2□□□□□ -1.74
YBX3-206ENST00000536823 HSBP1O75506 76 aa4.2□□□□□ -1.74
YBX3-206ENST00000536823 TRGC2P03986 189 aa4.2□□□□□ -1.74
YBX3-206ENST00000536823 RPL13AP40429 203 aaKnown RBP4.2□□□□□ -1.74
YBX3-206ENST00000536823 RPL28P46779 137 aaKnown RBP4.2□□□□□ -1.74
YBX3-206ENST00000536823 COX17Q14061 63 aa4.2□□□□□ -1.74
YBX3-206ENST00000536823 SND1-IT1Q9HBX3 110 aa4.2□□□□□ -1.74
YBX3-206ENST00000536823 TMEM223A0PJW6 202 aa4.19□□□□□ -1.74
YBX3-206ENST00000536823 SCO1O75880 301 aa4.19□□□□□ -1.74
YBX3-206ENST00000536823 SMIM29Q86T20 159 aa4.19□□□□□ -1.74
YBX3-206ENST00000536823 KRTAP13-1Q8IUC0 172 aa4.19□□□□□ -1.74
YBX3-206ENST00000536823 SLC7A5P1Q8MH63 180 aa4.19□□□□□ -1.74
YBX3-206ENST00000536823 FAM19A2Q8N3H0 131 aa4.19□□□□□ -1.74
YBX3-206ENST00000536823 RNF213Q63HN8 5207 aa4.19□□□□□ -1.74
YBX3-206ENST00000536823 IGKV2-28A0A075B6P5 120 aa4.18□□□□□ -1.74
YBX3-206ENST00000536823 SERF1AO75920 110 aa4.18□□□□□ -1.74
YBX3-206ENST00000536823 IGKV2D-28P01615 120 aa4.18□□□□□ -1.74
YBX3-206ENST00000536823 UBE2AP49459 152 aa4.18□□□□□ -1.74
YBX3-206ENST00000536823 Q8NDZ9 215 aa4.18□□□□□ -1.74
YBX3-206ENST00000536823 KRTAP4-3Q9BYR4 195 aa4.18□□□□□ -1.74
YBX3-206ENST00000536823 LEPROTL1O95214 131 aa4.17□□□□□ -1.74
YBX3-206ENST00000536823 LINC00158P58513 81 aa4.17□□□□□ -1.74
YBX3-206ENST00000536823 COLCA2A8K830 154 aa4.16□□□□□ -1.74
YBX3-206ENST00000536823 H0Y8G0 127 aa4.16□□□□□ -1.74
YBX3-206ENST00000536823 PLNP26678 52 aa4.16□□□□□ -1.74
YBX3-206ENST00000536823 HERV-K104P63124 156 aa4.16□□□□□ -1.74
YBX3-206ENST00000536823 TMEM126AQ9H061 195 aa4.16□□□□□ -1.74
YBX3-206ENST00000536823 NDUFA12Q9UI09 145 aa4.16□□□□□ -1.74
YBX3-206ENST00000536823 HSPB8Q9UJY1 196 aa4.16□□□□□ -1.74
YBX3-206ENST00000536823 A0A087X002 238 aa4.15□□□□□ -1.75
YBX3-206ENST00000536823 A0A0U1RRA0 63 aa4.15□□□□□ -1.75
YBX3-206ENST00000536823 C5orf52A6NGY3 159 aa4.15□□□□□ -1.75
YBX3-206ENST00000536823 TMEM238C9JI98 176 aa4.15□□□□□ -1.75
YBX3-206ENST00000536823 M0R378 163 aa4.15□□□□□ -1.75
YBX3-206ENST00000536823 SMIM13P0DJ93 91 aa4.15□□□□□ -1.75
YBX3-206ENST00000536823 TSPEAR-AS2P59090 65 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms