RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 LENEPQ9Y5L5 61 aa2.99□□□□□ -1.93
CLIP1-207ENST00000536634 TRAPPC1Q9Y5R8 145 aa2.99□□□□□ -1.93
CLIP1-207ENST00000536634 IGLV10-54A0A075B6I4 117 aa2.98□□□□□ -1.93
CLIP1-207ENST00000536634 IGKV2-28A0A075B6P5 120 aa2.98□□□□□ -1.93
CLIP1-207ENST00000536634 SPRR5A0A1B0GTR4 108 aa2.98□□□□□ -1.93
CLIP1-207ENST00000536634 C9JAW5 83 aa2.98□□□□□ -1.93
CLIP1-207ENST00000536634 K7EN84 100 aa2.98□□□□□ -1.93
CLIP1-207ENST00000536634 IGKV2D-28P01615 120 aa2.98□□□□□ -1.93
CLIP1-207ENST00000536634 MT-ATP8P03928 68 aa2.98□□□□□ -1.93
CLIP1-207ENST00000536634 FABP2P12104 132 aa2.98□□□□□ -1.93
CLIP1-207ENST00000536634 CSN1S1P47710 185 aa2.98□□□□□ -1.93
CLIP1-207ENST00000536634 UBE2D3P61077 147 aa2.98□□□□□ -1.93
CLIP1-207ENST00000536634 UBE2D2P62837 147 aa2.98□□□□□ -1.93
CLIP1-207ENST00000536634 CCL20P78556 96 aa2.98□□□□□ -1.93
CLIP1-207ENST00000536634 MIAQ16674 131 aa2.98□□□□□ -1.93
CLIP1-207ENST00000536634 NKAPP1Q8N9T2 125 aa2.98□□□□□ -1.93
CLIP1-207ENST00000536634 MBD3L1Q8WWY6 194 aa2.98□□□□□ -1.93
CLIP1-207ENST00000536634 KCNS1Q96KK3 526 aa2.98□□□□□ -1.93
CLIP1-207ENST00000536634 A0A096LNI7 61 aa2.97□□□□□ -1.93
CLIP1-207ENST00000536634 TRBV6-8A0A0A6YYG3 113 aa2.97□□□□□ -1.93
CLIP1-207ENST00000536634 TRAV26-2A0A0B4J265 109 aa2.97□□□□□ -1.93
CLIP1-207ENST00000536634 A8MWV9 139 aa2.97□□□□□ -1.93
CLIP1-207ENST00000536634 SYS1-DBNDD2H3BUS1 97 aa2.97□□□□□ -1.93
CLIP1-207ENST00000536634 H3BUT2 72 aa2.97□□□□□ -1.93
CLIP1-207ENST00000536634 NTF3P20783 257 aa2.97□□□□□ -1.93
CLIP1-207ENST00000536634 RPL13AP40429 203 aaKnown RBP2.97□□□□□ -1.93
CLIP1-207ENST00000536634 GNG5P63218 68 aa2.97□□□□□ -1.93
CLIP1-207ENST00000536634 PMVKQ15126 192 aa2.97□□□□□ -1.93
CLIP1-207ENST00000536634 MEIG1Q5JSS6 88 aa2.97□□□□□ -1.93
CLIP1-207ENST00000536634 GOLT1AQ6ZVE7 132 aa2.97□□□□□ -1.93
CLIP1-207ENST00000536634 LINC00269Q8N2A0 174 aa2.97□□□□□ -1.93
CLIP1-207ENST00000536634 FAM213BQ8TBF2 198 aa2.97□□□□□ -1.93
CLIP1-207ENST00000536634 NAA38Q9BRA0 125 aaKnown RBP2.97□□□□□ -1.93
CLIP1-207ENST00000536634 NPCDR1Q9BY65 106 aa2.97□□□□□ -1.93
CLIP1-207ENST00000536634 C11orf1Q9H5F2 150 aa2.97□□□□□ -1.93
CLIP1-207ENST00000536634 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.96□□□□□ -1.94
CLIP1-207ENST00000536634 CXorf1O96002 111 aa2.96□□□□□ -1.94
CLIP1-207ENST00000536634 BCL2P10415 239 aa2.96□□□□□ -1.94
CLIP1-207ENST00000536634 IFITM1P13164 125 aa2.96□□□□□ -1.94
CLIP1-207ENST00000536634 RPL23P62829 140 aaKnown RBP2.96□□□□□ -1.94
CLIP1-207ENST00000536634 CACNG7P62955 275 aa2.96□□□□□ -1.94
CLIP1-207ENST00000536634 UBE2L3P68036 154 aaKnown RBP2.96□□□□□ -1.94
CLIP1-207ENST00000536634 FAM74A4Q5TZK3 123 aa2.96□□□□□ -1.94
CLIP1-207ENST00000536634 C2orf91Q6ZV80 131 aa2.96□□□□□ -1.94
CLIP1-207ENST00000536634 ATOH7Q8N100 152 aa2.96□□□□□ -1.94
CLIP1-207ENST00000536634 C15orf56Q8N910 161 aa2.96□□□□□ -1.94
CLIP1-207ENST00000536634 C20orf78Q9BR46 151 aa2.96□□□□□ -1.94
CLIP1-207ENST00000536634 SPANXDQ9BXN6 97 aa2.96□□□□□ -1.94
CLIP1-207ENST00000536634 PSORS1C2Q9UIG4 136 aa2.96□□□□□ -1.94
CLIP1-207ENST00000536634 LSM5Q9Y4Y9 91 aaKnown RBP2.96□□□□□ -1.94
CLIP1-207ENST00000536634 IGLV4-69A0A075B6H9 119 aa2.95□□□□□ -1.94
CLIP1-207ENST00000536634 TRBV7-3A0A075B6L6 115 aa2.95□□□□□ -1.94
CLIP1-207ENST00000536634 A0A096LNJ9 63 aa2.95□□□□□ -1.94
CLIP1-207ENST00000536634 H3BMG7 143 aa2.95□□□□□ -1.94
CLIP1-207ENST00000536634 H3BVH4 76 aa2.95□□□□□ -1.94
CLIP1-207ENST00000536634 HSBP1O75506 76 aa2.95□□□□□ -1.94
CLIP1-207ENST00000536634 MT-ND6P03923 174 aa2.95□□□□□ -1.94
CLIP1-207ENST00000536634 HERVK_113P61574 105 aa2.95□□□□□ -1.94
CLIP1-207ENST00000536634 RASL11AQ6T310 242 aa2.95□□□□□ -1.94
CLIP1-207ENST00000536634 NTM-AS1Q6ZSK4 140 aa2.95□□□□□ -1.94
CLIP1-207ENST00000536634 BAGE3Q86Y29 109 aa2.95□□□□□ -1.94
CLIP1-207ENST00000536634 BAGE2Q86Y30 109 aa2.95□□□□□ -1.94
CLIP1-207ENST00000536634 BORCS7Q96B45 105 aa2.95□□□□□ -1.94
CLIP1-207ENST00000536634 OTORQ9NRC9 128 aa2.95□□□□□ -1.94
CLIP1-207ENST00000536634 TRBV10-1A0A0K0K1A3 114 aa2.94□□□□□ -1.94
CLIP1-207ENST00000536634 LOC107984640A0A0U1RRK4 108 aa2.94□□□□□ -1.94
CLIP1-207ENST00000536634 GRIFINA4D1Z8 144 aa2.94□□□□□ -1.94
CLIP1-207ENST00000536634 IGLC6P0CF74 106 aa2.94□□□□□ -1.94
CLIP1-207ENST00000536634 COX8AP10176 69 aa2.94□□□□□ -1.94
CLIP1-207ENST00000536634 NMUP48645 174 aa2.94□□□□□ -1.94
CLIP1-207ENST00000536634 UBE2G1P62253 170 aa2.94□□□□□ -1.94
CLIP1-207ENST00000536634 REG3AQ06141 175 aa2.94□□□□□ -1.94
CLIP1-207ENST00000536634 C4orf26Q17RF5 130 aa2.94□□□□□ -1.94
CLIP1-207ENST00000536634 Q5XG85 94 aa2.94□□□□□ -1.94
CLIP1-207ENST00000536634 SCGB1C1Q8TD33 95 aa2.94□□□□□ -1.94
CLIP1-207ENST00000536634 PRELID3AQ96N28 172 aa2.94□□□□□ -1.94
CLIP1-207ENST00000536634 SMIM7Q9BQ49 75 aa2.94□□□□□ -1.94
CLIP1-207ENST00000536634 IGLV4-60A0A075B6I1 120 aa2.93□□□□□ -1.94
CLIP1-207ENST00000536634 APOMO95445 188 aa2.93□□□□□ -1.94
CLIP1-207ENST00000536634 S100A4P26447 101 aaKnown RBP2.93□□□□□ -1.94
CLIP1-207ENST00000536634 ETDBQ3ZM63 59 aa2.93□□□□□ -1.94
CLIP1-207ENST00000536634 TSKUQ8WUA8 353 aa2.93□□□□□ -1.94
CLIP1-207ENST00000536634 PPDPFLQ8WWR9 84 aa2.93□□□□□ -1.94
CLIP1-207ENST00000536634 GNB1LQ9BYB4 327 aa2.93□□□□□ -1.94
CLIP1-207ENST00000536634 IL36BQ9NZH7 164 aa2.93□□□□□ -1.94
CLIP1-207ENST00000536634 A0A1W2PNN7 141 aa2.92□□□□□ -1.94
CLIP1-207ENST00000536634 F2Z2F3 143 aa2.92□□□□□ -1.94
CLIP1-207ENST00000536634 M0R381 172 aa2.92□□□□□ -1.94
CLIP1-207ENST00000536634 ATP5LO75964 103 aa2.92□□□□□ -1.94
CLIP1-207ENST00000536634 ARMS2P0C7Q2 107 aa2.92□□□□□ -1.94
CLIP1-207ENST00000536634 SMIM13P0DJ93 91 aa2.92□□□□□ -1.94
CLIP1-207ENST00000536634 HBG1P69891 147 aa2.92□□□□□ -1.94
CLIP1-207ENST00000536634 HBG2P69892 147 aa2.92□□□□□ -1.94
CLIP1-207ENST00000536634 FAM19A1Q7Z5A9 133 aa2.92□□□□□ -1.94
CLIP1-207ENST00000536634 PRNTQ86SH4 94 aa2.92□□□□□ -1.94
CLIP1-207ENST00000536634 GATD1Q8NB37 220 aa2.92□□□□□ -1.94
CLIP1-207ENST00000536634 PLEKHB2Q96CS7 222 aa2.92□□□□□ -1.94
CLIP1-207ENST00000536634 TMEM191AQ9H0A3 160 aa2.92□□□□□ -1.94
CLIP1-207ENST00000536634 GNG13Q9P2W3 67 aa2.92□□□□□ -1.94
CLIP1-207ENST00000536634 TRAV8-4A0A0B4J246 113 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms