RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 TRAV8-4A0A0B4J246 113 aa12.21□□□□□ -0.45
HTATSF1-204ENST00000535601 COPS9Q8WXC6 57 aa12.21□□□□□ -0.45
HTATSF1-204ENST00000535601 PLECQ15149 4684 aaKnown RBP12.21□□□□□ -0.45
HTATSF1-204ENST00000535601 TRBV10-2A0A0K0K1G8 114 aa12.21□□□□□ -0.46
HTATSF1-204ENST00000535601 NCR3O14931 201 aa12.21□□□□□ -0.46
HTATSF1-204ENST00000535601 SMIM11BQ8TCY0 68 aa12.21□□□□□ -0.46
HTATSF1-204ENST00000535601 XAGE1AQ9HD64 81 aa12.2□□□□□ -0.46
HTATSF1-204ENST00000535601 DNAH1Q9P2D7 4330 aa12.2□□□□□ -0.46
HTATSF1-204ENST00000535601 KRTAP26-1Q6PEX3 210 aa12.2□□□□□ -0.46
HTATSF1-204ENST00000535601 KLK5Q9Y337 293 aaPredicted RBP12.19□□□□□ -0.46
HTATSF1-204ENST00000535601 TTC32Q5I0X7 151 aa12.19□□□□□ -0.46
HTATSF1-204ENST00000535601 CASC10Q5T4H9 136 aa12.19□□□□□ -0.46
HTATSF1-204ENST00000535601 TGP01266 2768 aa12.18□□□□□ -0.46
HTATSF1-204ENST00000535601 LST1O00453 97 aa12.18□□□□□ -0.46
HTATSF1-204ENST00000535601 C15orf53Q8NAA6 179 aa12.18□□□□□ -0.46
HTATSF1-204ENST00000535601 C6orf48Q9UBA6 75 aa12.18□□□□□ -0.46
HTATSF1-204ENST00000535601 LINC01561Q8N1V8 128 aa12.18□□□□□ -0.46
HTATSF1-204ENST00000535601 TRAV13-2A0A0B4J235 113 aa12.17□□□□□ -0.46
HTATSF1-204ENST00000535601 C1orf43Q9BWL3 253 aa12.17□□□□□ -0.46
HTATSF1-204ENST00000535601 C15orf56Q8N910 161 aa12.16□□□□□ -0.46
HTATSF1-204ENST00000535601 LECT2O14960 151 aa12.16□□□□□ -0.46
HTATSF1-204ENST00000535601 NHLRC4P0CG21 123 aaPredicted RBP12.16□□□□□ -0.46
HTATSF1-204ENST00000535601 LINC01556Q5JQF7 62 aa12.16□□□□□ -0.46
HTATSF1-204ENST00000535601 ZNF561-AS1K7EIQ3 104 aa12.15□□□□□ -0.46
HTATSF1-204ENST00000535601 NDUFV3P56181 108 aaKnown RBP12.15□□□□□ -0.46
HTATSF1-204ENST00000535601 C5orf47Q569G3 176 aa12.15□□□□□ -0.46
HTATSF1-204ENST00000535601 CXCL5P42830 114 aa12.14□□□□□ -0.47
HTATSF1-204ENST00000535601 A0A087WYN8 130 aa12.14□□□□□ -0.47
HTATSF1-204ENST00000535601 CAMK2N2Q96S95 79 aa12.14□□□□□ -0.47
HTATSF1-204ENST00000535601 STARD9Q9P2P6 4700 aa12.14□□□□□ -0.47
HTATSF1-204ENST00000535601 Q6ZRU5 148 aa12.13□□□□□ -0.47
HTATSF1-204ENST00000535601 CCDC179H3BU77 68 aa12.11□□□□□ -0.47
HTATSF1-204ENST00000535601 RPL28P46779 137 aaKnown RBP12.11□□□□□ -0.47
HTATSF1-204ENST00000535601 SLPIP03973 132 aa12.1□□□□□ -0.47
HTATSF1-204ENST00000535601 RPL18AQ02543 176 aaKnown RBP12.1□□□□□ -0.47
HTATSF1-204ENST00000535601 DNAH10OSP0CZ25 163 aa12.09□□□□□ -0.47
HTATSF1-204ENST00000535601 COX17Q14061 63 aa12.09□□□□□ -0.47
HTATSF1-204ENST00000535601 H3BT86 120 aa12.08□□□□□ -0.47
HTATSF1-204ENST00000535601 KRTAP1-5Q9BYS1 174 aa12.05□□□□□ -0.48
HTATSF1-204ENST00000535601 S100A7L2Q5SY68 101 aa12.04□□□□□ -0.48
HTATSF1-204ENST00000535601 DYNC2H1Q8NCM8 4307 aaKnown RBP12.04□□□□□ -0.48
HTATSF1-204ENST00000535601 BAALC-AS2P0C853 105 aa12.03□□□□□ -0.48
HTATSF1-204ENST00000535601 C9orf129Q5T035 196 aaKnown RBP12.03□□□□□ -0.48
HTATSF1-204ENST00000535601 C6orf99Q4VX62 202 aa12.02□□□□□ -0.49
HTATSF1-204ENST00000535601 LINC01600Q96MT4 127 aa12.02□□□□□ -0.49
HTATSF1-204ENST00000535601 Q6ZRP5 223 aa12.02□□□□□ -0.49
HTATSF1-204ENST00000535601 B9D2Q9BPU9 175 aa12.02□□□□□ -0.49
HTATSF1-204ENST00000535601 C22orf24Q9Y442 160 aa12.02□□□□□ -0.49
HTATSF1-204ENST00000535601 USP17L23D6RBM5 183 aa12.01□□□□□ -0.49
HTATSF1-204ENST00000535601 Q6Q795 121 aa12□□□□□ -0.49
HTATSF1-204ENST00000535601 TRBV10-3A0A0K0K1G6 114 aa11.99□□□□□ -0.49
HTATSF1-204ENST00000535601 NDUFC2O95298 119 aa11.99□□□□□ -0.49
HTATSF1-204ENST00000535601 TMEM126AQ9H061 195 aa11.99□□□□□ -0.49
HTATSF1-204ENST00000535601 FBN3Q75N90 2809 aa11.98□□□□□ -0.49
HTATSF1-204ENST00000535601 GVQW2A0A096LPI5 108 aaPredicted RBP11.98□□□□□ -0.49
HTATSF1-204ENST00000535601 DNAL4O96015 105 aa11.98□□□□□ -0.49
HTATSF1-204ENST00000535601 SYCNQ0VAF6 134 aa11.98□□□□□ -0.49
HTATSF1-204ENST00000535601 UBE2DNLQ8IWF7 75 aa11.98□□□□□ -0.49
HTATSF1-204ENST00000535601 TRACP01848 142 aa11.98□□□□□ -0.49
HTATSF1-204ENST00000535601 F8WDY8 70 aa11.97□□□□□ -0.49
HTATSF1-204ENST00000535601 KMT2AQ03164 3969 aa11.97□□□□□ -0.49
HTATSF1-204ENST00000535601 FAM240AA0A1B0GVK7 77 aa11.95□□□□□ -0.5
HTATSF1-204ENST00000535601 NDUFC2-KCTD14E9PQ53 114 aa11.95□□□□□ -0.5
HTATSF1-204ENST00000535601 APLNQ9ULZ1 77 aa11.95□□□□□ -0.5
HTATSF1-204ENST00000535601 FAM168BA1KXE4 195 aa11.94□□□□□ -0.5
HTATSF1-204ENST00000535601 FAM236AA0A1B0GUQ0 79 aa11.93□□□□□ -0.5
HTATSF1-204ENST00000535601 FAM236BA0A1B0GV22 79 aa11.93□□□□□ -0.5
HTATSF1-204ENST00000535601 H0YGX0 51 aa11.93□□□□□ -0.5
HTATSF1-204ENST00000535601 C2orf48Q96LS8 159 aa11.93□□□□□ -0.5
HTATSF1-204ENST00000535601 VPREB1P12018 145 aa11.92□□□□□ -0.5
HTATSF1-204ENST00000535601 SERTAD4-AS1Q5TG53 156 aa11.92□□□□□ -0.5
HTATSF1-204ENST00000535601 SMCR5Q8TEV8 140 aa11.91□□□□□ -0.5
HTATSF1-204ENST00000535601 IGLV6-57P01721 117 aa11.91□□□□□ -0.5
HTATSF1-204ENST00000535601 UPK3BQ9BT76 320 aa11.9□□□□□ -0.5
HTATSF1-204ENST00000535601 SEC61GP60059 68 aa11.89□□□□□ -0.51
HTATSF1-204ENST00000535601 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.89□□□□□ -0.51
HTATSF1-204ENST00000535601 GAGE2AQ6NT46 116 aa11.89□□□□□ -0.51
HTATSF1-204ENST00000535601 Q8N814 137 aa11.89□□□□□ -0.51
HTATSF1-204ENST00000535601 C14orf132Q9NPU4 83 aa11.89□□□□□ -0.51
HTATSF1-204ENST00000535601 SRRM2Q9UQ35 2752 aaKnown RBP11.88□□□□□ -0.51
HTATSF1-204ENST00000535601 TRBV7-7A0A0K0K1E9 115 aa11.88□□□□□ -0.51
HTATSF1-204ENST00000535601 LOC107984640A0A0U1RRK4 108 aa11.88□□□□□ -0.51
HTATSF1-204ENST00000535601 TRAV23DV6A0A075B6W5 121 aa11.87□□□□□ -0.51
HTATSF1-204ENST00000535601 M0R2N4 97 aa11.87□□□□□ -0.51
HTATSF1-204ENST00000535601 PSCAO43653 123 aa11.86□□□□□ -0.51
HTATSF1-204ENST00000535601 ACYP1P07311 99 aa11.86□□□□□ -0.51
HTATSF1-204ENST00000535601 VPS13DQ5THJ4 4388 aa11.86□□□□□ -0.51
HTATSF1-204ENST00000535601 RPL37AP8A6NKH3 93 aa11.86□□□□□ -0.51
HTATSF1-204ENST00000535601 ORMDL1Q9P0S3 153 aa11.84□□□□□ -0.51
HTATSF1-204ENST00000535601 ZNF73O43830 326 aaPredicted RBP11.84□□□□□ -0.51
HTATSF1-204ENST00000535601 LINC00643Q86TS7 51 aa11.84□□□□□ -0.51
HTATSF1-204ENST00000535601 LINC00575Q6W349 94 aa11.83□□□□□ -0.52
HTATSF1-204ENST00000535601 RMI2Q96E14 147 aa11.83□□□□□ -0.52
HTATSF1-204ENST00000535601 FUSP35637 526 aaKnown RBP eCLIP11.82□□□□□ -0.52
HTATSF1-204ENST00000535601 IGKV2-24A0A0C4DH68 120 aa11.82□□□□□ -0.52
HTATSF1-204ENST00000535601 FAM19A5Q7Z5A7 132 aaPredicted RBP11.82□□□□□ -0.52
HTATSF1-204ENST00000535601 MUC7Q8TAX7 377 aa11.82□□□□□ -0.52
HTATSF1-204ENST00000535601 KRTAP7-1Q8IUC3 87 aa11.81□□□□□ -0.52
HTATSF1-204ENST00000535601 DIRC1Q969H9 104 aa11.81□□□□□ -0.52
HTATSF1-204ENST00000535601 Q6ZQY7 126 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms