RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 HIGD1BQ9P298 99 aa-1.81□□□□□ -2.7
COPB1-212ENST00000534771 V9GYQ6 96 aa-1.81□□□□□ -2.7
COPB1-212ENST00000534771 NUP188Q5SRE5 1749 aa-1.81□□□□□ -2.7
COPB1-212ENST00000534771 OVOS2A0A0J9YW53 1432 aa-1.82□□□□□ -2.7
COPB1-212ENST00000534771 OVOS2Q6IE36 1432 aa-1.82□□□□□ -2.7
COPB1-212ENST00000534771 LRRC37AA6NMS7 1700 aa-1.82□□□□□ -2.7
COPB1-212ENST00000534771 PRLHP81277 87 aa-1.82□□□□□ -2.7
COPB1-212ENST00000534771 FAM223AQ8IWN6 122 aa-1.82□□□□□ -2.7
COPB1-212ENST00000534771 SKA2Q8WVK7 121 aaPredicted RBP-1.82□□□□□ -2.7
COPB1-212ENST00000534771 ALKQ9UM73 1620 aa-1.82□□□□□ -2.7
COPB1-212ENST00000534771 SCN7AQ01118 1682 aa-1.83□□□□□ -2.7
COPB1-212ENST00000534771 BRCA2P51587 3418 aa-1.83□□□□□ -2.7
COPB1-212ENST00000534771 A0A1B0GU69 56 aa-1.83□□□□□ -2.7
COPB1-212ENST00000534771 A0A1B0GV72 72 aa-1.83□□□□□ -2.7
COPB1-212ENST00000534771 IGLC6P0CF74 106 aa-1.83□□□□□ -2.7
COPB1-212ENST00000534771 TSLPQ969D9 159 aa-1.83□□□□□ -2.7
COPB1-212ENST00000534771 TMEM191AQ9H0A3 160 aa-1.83□□□□□ -2.7
COPB1-212ENST00000534771 TPT1P8Q9HAU6 139 aa-1.83□□□□□ -2.7
COPB1-212ENST00000534771 COPZ2Q9P299 210 aa-1.83□□□□□ -2.7
COPB1-212ENST00000534771 PSME4Q14997 1843 aa-1.83□□□□□ -2.7
COPB1-212ENST00000534771 MYH6P13533 1939 aa-1.83□□□□□ -2.7
COPB1-212ENST00000534771 CDK5RAP2Q96SN8 1893 aa-1.84□□□□□ -2.7
COPB1-212ENST00000534771 EHBP1L1Q8N3D4 1523 aa-1.84□□□□□ -2.7
COPB1-212ENST00000534771 CDH23Q9H251 3354 aa-1.84□□□□□ -2.7
COPB1-212ENST00000534771 SNCAP37840 140 aa-1.84□□□□□ -2.7
COPB1-212ENST00000534771 CCDC153Q494R4 210 aa-1.84□□□□□ -2.7
COPB1-212ENST00000534771 MORN2Q502X0 79 aa-1.84□□□□□ -2.7
COPB1-212ENST00000534771 C5orf38Q86SI9 138 aa-1.84□□□□□ -2.7
COPB1-212ENST00000534771 CLIP1P30622 1438 aa-1.84□□□□□ -2.7
COPB1-212ENST00000534771 MBD5Q9P267 1494 aa-1.85□□□□□ -2.71
COPB1-212ENST00000534771 LCE6AA0A183 80 aa-1.85□□□□□ -2.71
COPB1-212ENST00000534771 DBIP07108 87 aaKnown RBP-1.85□□□□□ -2.71
COPB1-212ENST00000534771 FGF7P21781 194 aa-1.85□□□□□ -2.71
COPB1-212ENST00000534771 C12orf73Q69YU5 71 aa-1.85□□□□□ -2.71
COPB1-212ENST00000534771 MYOZ3Q8TDC0 251 aa-1.85□□□□□ -2.71
COPB1-212ENST00000534771 SPANXCQ9NY87 97 aa-1.85□□□□□ -2.71
COPB1-212ENST00000534771 SMPXQ9UHP9 88 aa-1.85□□□□□ -2.71
COPB1-212ENST00000534771 ARL2-SNX15V9GYD0 113 aa-1.85□□□□□ -2.71
COPB1-212ENST00000534771 SHROOM2Q13796 1616 aa-1.85□□□□□ -2.71
COPB1-212ENST00000534771 PRDM15P57071 1507 aaPredicted RBP-1.86□□□□□ -2.71
COPB1-212ENST00000534771 PBRM1Q86U86 1689 aa-1.86□□□□□ -2.71
COPB1-212ENST00000534771 ABCC10Q5T3U5 1492 aa-1.86□□□□□ -2.71
COPB1-212ENST00000534771 E5RI56 91 aa-1.86□□□□□ -2.71
COPB1-212ENST00000534771 TNP1P09430 55 aa-1.86□□□□□ -2.71
COPB1-212ENST00000534771 GUCA1AP43080 201 aaPredicted RBP-1.86□□□□□ -2.71
COPB1-212ENST00000534771 KCNRGQ8N5I3 272 aa-1.86□□□□□ -2.71
COPB1-212ENST00000534771 RGPD2P0DJD1 1756 aa-1.86□□□□□ -2.71
COPB1-212ENST00000534771 ADGRL2O95490 1459 aa-1.87□□□□□ -2.71
COPB1-212ENST00000534771 MYH7P12883 1935 aa-1.87□□□□□ -2.71
COPB1-212ENST00000534771 CEP152O94986 1710 aa-1.87□□□□□ -2.71
COPB1-212ENST00000534771 G0S2P27469 103 aa-1.87□□□□□ -2.71
COPB1-212ENST00000534771 KRTAP19-2Q3LHN2 52 aa-1.87□□□□□ -2.71
COPB1-212ENST00000534771 UQCR10Q9UDW1 63 aa-1.87□□□□□ -2.71
COPB1-212ENST00000534771 VPS13AQ96RL7 3174 aa-1.88□□□□□ -2.71
COPB1-212ENST00000534771 SPTY2D1-AS1A0A0U1RR47 76 aa-1.88□□□□□ -2.71
COPB1-212ENST00000534771 A0A1B0GWA3 101 aa-1.88□□□□□ -2.71
COPB1-212ENST00000534771 CHKB-CPT1BH3BT56 60 aa-1.88□□□□□ -2.71
COPB1-212ENST00000534771 H7BZZ5 65 aa-1.88□□□□□ -2.71
COPB1-212ENST00000534771 TSPAN19P0C672 248 aa-1.88□□□□□ -2.71
COPB1-212ENST00000534771 LINC00694P0DN24 101 aa-1.88□□□□□ -2.71
COPB1-212ENST00000534771 C9orf153Q5TBE3 101 aa-1.88□□□□□ -2.71
COPB1-212ENST00000534771 C6orf201Q7Z4U5 140 aa-1.88□□□□□ -2.71
COPB1-212ENST00000534771 HSPB11Q9Y547 144 aa-1.88□□□□□ -2.71
COPB1-212ENST00000534771 C4AP0C0L4 1744 aa-1.88□□□□□ -2.71
COPB1-212ENST00000534771 C4BP0C0L5 1744 aa-1.88□□□□□ -2.71
COPB1-212ENST00000534771 MAPKBP1O60336 1514 aa-1.89□□□□□ -2.71
COPB1-212ENST00000534771 TSTD3H0UI37 97 aa-1.89□□□□□ -2.71
COPB1-212ENST00000534771 J3QR89 54 aa-1.89□□□□□ -2.71
COPB1-212ENST00000534771 SAA2P0DJI9 122 aaPredicted RBP-1.89□□□□□ -2.71
COPB1-212ENST00000534771 GNG10P50151 68 aa-1.89□□□□□ -2.71
COPB1-212ENST00000534771 DEFB136Q30KP8 78 aa-1.89□□□□□ -2.71
COPB1-212ENST00000534771 AIF1LQ9BQI0 150 aa-1.89□□□□□ -2.71
COPB1-212ENST00000534771 CENPHQ9H3R5 247 aa-1.89□□□□□ -2.71
COPB1-212ENST00000534771 GINS2Q9Y248 185 aa-1.89□□□□□ -2.71
COPB1-212ENST00000534771 TIAM2Q8IVF5 1701 aa-1.89□□□□□ -2.71
COPB1-212ENST00000534771 DIP2CQ9Y2E4 1556 aa-1.89□□□□□ -2.71
COPB1-212ENST00000534771 CPSF1Q10570 1443 aaKnown RBP-1.9□□□□□ -2.71
COPB1-212ENST00000534771 CUX1P39880 1505 aa-1.9□□□□□ -2.71
COPB1-212ENST00000534771 LINC01546A6NGU7 62 aa-1.9□□□□□ -2.71
COPB1-212ENST00000534771 SMIM3Q9BZL3 60 aa-1.9□□□□□ -2.71
COPB1-212ENST00000534771 PRO3102Q9H379 93 aa-1.9□□□□□ -2.71
COPB1-212ENST00000534771 TCHHQ07283 1943 aa-1.9□□□□□ -2.71
COPB1-212ENST00000534771 PDCD11Q14690 1871 aaKnown RBP-1.9□□□□□ -2.71
COPB1-212ENST00000534771 FHAD1B1AJZ9 1412 aa-1.91□□□□□ -2.71
COPB1-212ENST00000534771 FAM223BA6NKX1 122 aa-1.91□□□□□ -2.72
COPB1-212ENST00000534771 K7ERU9 68 aa-1.91□□□□□ -2.72
COPB1-212ENST00000534771 DDA1Q9BW61 102 aa-1.91□□□□□ -2.72
COPB1-212ENST00000534771 CFTRP13569 1480 aa-1.91□□□□□ -2.72
COPB1-212ENST00000534771 SMARCA2P51531 1590 aa-1.91□□□□□ -2.72
COPB1-212ENST00000534771 TARBP1Q13395 1621 aaKnown RBP-1.91□□□□□ -2.72
COPB1-212ENST00000534771 PREX1Q8TCU6 1659 aa-1.92□□□□□ -2.72
COPB1-212ENST00000534771 MRC2Q9UBG0 1479 aa-1.92□□□□□ -2.72
COPB1-212ENST00000534771 MMP24-AS1A0A0U1RRL7 71 aa-1.92□□□□□ -2.72
COPB1-212ENST00000534771 ARL11Q969Q4 196 aa-1.92□□□□□ -2.72
COPB1-212ENST00000534771 SPANXA1Q9NS26 97 aa-1.92□□□□□ -2.72
COPB1-212ENST00000534771 ANKRD36A6QL64 1941 aa-1.92□□□□□ -2.72
COPB1-212ENST00000534771 TOP2BQ02880 1626 aa-1.92□□□□□ -2.72
COPB1-212ENST00000534771 SMCO1Q147U7 214 aa-1.93□□□□□ -2.72
COPB1-212ENST00000534771 NMSQ5H8A3 153 aa-1.93□□□□□ -2.72
COPB1-212ENST00000534771 COPS9Q8WXC6 57 aa-1.93□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms