RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 TMEM141Q96I45 108 aa3.71□□□□□ -1.82
HMGB1P42-201ENST00000532126 KRTAP17-1Q9BYP8 105 aa3.71□□□□□ -1.82
HMGB1P42-201ENST00000532126 TRAPPC1Q9Y5R8 145 aa3.71□□□□□ -1.82
HMGB1P42-201ENST00000532126 SCGB1C2P0DMR2 95 aa3.7□□□□□ -1.82
HMGB1P42-201ENST00000532126 PMAIP1Q13794 54 aa3.7□□□□□ -1.82
HMGB1P42-201ENST00000532126 SDIM1Q6ZPB5 146 aa3.7□□□□□ -1.82
HMGB1P42-201ENST00000532126 FA2HQ7L5A8 372 aa3.7□□□□□ -1.82
HMGB1P42-201ENST00000532126 SCXQ7RTU7 201 aa3.7□□□□□ -1.82
HMGB1P42-201ENST00000532126 C5orf38Q86SI9 138 aa3.7□□□□□ -1.82
HMGB1P42-201ENST00000532126 TIMM17AQ99595 171 aa3.7□□□□□ -1.82
HMGB1P42-201ENST00000532126 VPS25Q9BRG1 176 aa3.7□□□□□ -1.82
HMGB1P42-201ENST00000532126 ANAPC13Q9BS18 74 aa3.7□□□□□ -1.82
HMGB1P42-201ENST00000532126 CHAC1Q9BUX1 264 aa3.7□□□□□ -1.82
HMGB1P42-201ENST00000532126 KRTAP4-5Q9BYR2 181 aa3.7□□□□□ -1.82
HMGB1P42-201ENST00000532126 ABCA13Q86UQ4 5058 aa3.69□□□□□ -1.82
HMGB1P42-201ENST00000532126 LINC01546A6NGU7 62 aa3.69□□□□□ -1.82
HMGB1P42-201ENST00000532126 IGIPA6NJ69 53 aa3.69□□□□□ -1.82
HMGB1P42-201ENST00000532126 KRTAP4-16G5E9R7 235 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P42-201ENST00000532126 APOMO95445 188 aa3.69□□□□□ -1.82
HMGB1P42-201ENST00000532126 PYY3Q5JQD4 70 aa3.69□□□□□ -1.82
HMGB1P42-201ENST00000532126 Q5VSD8 79 aa3.69□□□□□ -1.82
HMGB1P42-201ENST00000532126 CIRBP-AS1Q8TBR5 109 aa3.69□□□□□ -1.82
HMGB1P42-201ENST00000532126 TOMM6Q96B49 74 aa3.69□□□□□ -1.82
HMGB1P42-201ENST00000532126 LINC00526Q96FQ7 95 aa3.69□□□□□ -1.82
HMGB1P42-201ENST00000532126 DPH3Q96FX2 82 aa3.69□□□□□ -1.82
HMGB1P42-201ENST00000532126 YPEL4Q96NS1 127 aa3.69□□□□□ -1.82
HMGB1P42-201ENST00000532126 SCGB3A1Q96QR1 104 aa3.69□□□□□ -1.82
HMGB1P42-201ENST00000532126 SMCO4Q9NRQ5 59 aa3.69□□□□□ -1.82
HMGB1P42-201ENST00000532126 APOBP04114 4563 aaKnown RBP3.68□□□□□ -1.82
HMGB1P42-201ENST00000532126 HSPG2P98160 4391 aa3.68□□□□□ -1.82
HMGB1P42-201ENST00000532126 IGLV4-69A0A075B6H9 119 aa3.68□□□□□ -1.82
HMGB1P42-201ENST00000532126 C20orf202A1L168 122 aa3.68□□□□□ -1.82
HMGB1P42-201ENST00000532126 LINC01549A6NIU2 74 aa3.68□□□□□ -1.82
HMGB1P42-201ENST00000532126 IGKV2-30P06310 120 aa3.68□□□□□ -1.82
HMGB1P42-201ENST00000532126 UBE2D1P51668 147 aa3.68□□□□□ -1.82
HMGB1P42-201ENST00000532126 COX6A2Q02221 97 aa3.68□□□□□ -1.82
HMGB1P42-201ENST00000532126 SPAG11BQ08648 103 aa3.68□□□□□ -1.82
HMGB1P42-201ENST00000532126 SYCNQ0VAF6 134 aa3.68□□□□□ -1.82
HMGB1P42-201ENST00000532126 ZC2HC1BQ5TFG8 222 aa3.68□□□□□ -1.82
HMGB1P42-201ENST00000532126 OR10D4PQ8NGN7 298 aa3.68□□□□□ -1.82
HMGB1P42-201ENST00000532126 CARD19Q96LW7 228 aa3.68□□□□□ -1.82
HMGB1P42-201ENST00000532126 CAMK2N2Q96S95 79 aa3.68□□□□□ -1.82
HMGB1P42-201ENST00000532126 AMELXQ99217 191 aa3.68□□□□□ -1.82
HMGB1P42-201ENST00000532126 LITAFQ99732 161 aa3.68□□□□□ -1.82
HMGB1P42-201ENST00000532126 PKIGQ9Y2B9 76 aa3.68□□□□□ -1.82
HMGB1P42-201ENST00000532126 PANO1I0J062 215 aa3.67□□□□□ -1.82
HMGB1P42-201ENST00000532126 K7ERU9 68 aa3.67□□□□□ -1.82
HMGB1P42-201ENST00000532126 SEC11AP67812 179 aa3.67□□□□□ -1.82
HMGB1P42-201ENST00000532126 CIRBPQ14011 172 aaKnown RBP3.67□□□□□ -1.82
HMGB1P42-201ENST00000532126 Q8N377 158 aa3.67□□□□□ -1.82
HMGB1P42-201ENST00000532126 SMIM20Q8N5G0 67 aa3.67□□□□□ -1.82
HMGB1P42-201ENST00000532126 LINC00337Q8N6G1 96 aa3.67□□□□□ -1.82
HMGB1P42-201ENST00000532126 C18orf32Q8TCD1 76 aa3.67□□□□□ -1.82
HMGB1P42-201ENST00000532126 SNHG12Q9BXW3 62 aa3.67□□□□□ -1.82
HMGB1P42-201ENST00000532126 IGKV2-24A0A0C4DH68 120 aa3.66□□□□□ -1.82
HMGB1P42-201ENST00000532126 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P42-201ENST00000532126 INAFM2P0DMQ5 153 aa3.66□□□□□ -1.82
HMGB1P42-201ENST00000532126 MP68P56378 58 aa3.66□□□□□ -1.82
HMGB1P42-201ENST00000532126 HERVK_113P63121 156 aa3.66□□□□□ -1.82
HMGB1P42-201ENST00000532126 Q6ZRU5 148 aa3.66□□□□□ -1.82
HMGB1P42-201ENST00000532126 SPACA4Q8TDM5 124 aa3.66□□□□□ -1.82
HMGB1P42-201ENST00000532126 KRTAP4-2Q9BYR5 136 aa3.66□□□□□ -1.82
HMGB1P42-201ENST00000532126 RBM12B-AS1Q9P1G2 102 aa3.66□□□□□ -1.82
HMGB1P42-201ENST00000532126 LINC00474Q9P2X8 69 aa3.66□□□□□ -1.82
HMGB1P42-201ENST00000532126 A0A087WYN8 130 aa3.65□□□□□ -1.83
HMGB1P42-201ENST00000532126 A0A096LNI7 61 aa3.65□□□□□ -1.83
HMGB1P42-201ENST00000532126 LOC107984640A0A0U1RRK4 108 aa3.65□□□□□ -1.83
HMGB1P42-201ENST00000532126 COLCA2A8K830 154 aa3.65□□□□□ -1.83
HMGB1P42-201ENST00000532126 NDUFC2-KCTD14E9PQ53 114 aa3.65□□□□□ -1.83
HMGB1P42-201ENST00000532126 NDUFA1O15239 70 aa3.65□□□□□ -1.83
HMGB1P42-201ENST00000532126 HBDP02042 147 aa3.65□□□□□ -1.83
HMGB1P42-201ENST00000532126 PMCHL1Q16048 86 aa3.65□□□□□ -1.83
HMGB1P42-201ENST00000532126 COL5A1-AS1Q5SY13 56 aa3.65□□□□□ -1.83
HMGB1P42-201ENST00000532126 FAM19A3Q7Z5A8 133 aa3.65□□□□□ -1.83
HMGB1P42-201ENST00000532126 CST9LQ9H4G1 147 aa3.65□□□□□ -1.83
HMGB1P42-201ENST00000532126 MRPL35Q9NZE8 188 aaKnown RBP3.65□□□□□ -1.83
HMGB1P42-201ENST00000532126 A0A096LNJ9 63 aa3.64□□□□□ -1.83
HMGB1P42-201ENST00000532126 NDUFA6P56556 154 aa3.64□□□□□ -1.83
HMGB1P42-201ENST00000532126 CKS1BP61024 79 aa3.64□□□□□ -1.83
HMGB1P42-201ENST00000532126 JOSD1Q15040 202 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P42-201ENST00000532126 UNQ6190/PRO20217Q6UXQ8 127 aa3.64□□□□□ -1.83
HMGB1P42-201ENST00000532126 CHCHD1Q96BP2 118 aaKnown RBP3.64□□□□□ -1.83
HMGB1P42-201ENST00000532126 PLAC8Q9NZF1 115 aa3.64□□□□□ -1.83
HMGB1P42-201ENST00000532126 TOMM7Q9P0U1 55 aa3.64□□□□□ -1.83
HMGB1P42-201ENST00000532126 CDKN2A-AS1Q9UH64 79 aa3.64□□□□□ -1.83
HMGB1P42-201ENST00000532126 IGLV1-50A0A075B6I6 118 aa3.63□□□□□ -1.83
HMGB1P42-201ENST00000532126 TRGC2P03986 189 aa3.63□□□□□ -1.83
HMGB1P42-201ENST00000532126 RPL37AP61513 92 aaKnown RBP3.63□□□□□ -1.83
HMGB1P42-201ENST00000532126 Q1RN00 199 aa3.63□□□□□ -1.83
HMGB1P42-201ENST00000532126 OCIAD2Q56VL3 154 aa3.63□□□□□ -1.83
HMGB1P42-201ENST00000532126 C2orf82Q6UX34 121 aa3.63□□□□□ -1.83
HMGB1P42-201ENST00000532126 BAGE3Q86Y29 109 aa3.63□□□□□ -1.83
HMGB1P42-201ENST00000532126 Q8IZM0 81 aa3.63□□□□□ -1.83
HMGB1P42-201ENST00000532126 SPANXCQ9NY87 97 aa3.63□□□□□ -1.83
HMGB1P42-201ENST00000532126 C6orf48Q9UBA6 75 aa3.63□□□□□ -1.83
HMGB1P42-201ENST00000532126 DNAH8Q96JB1 4490 aa3.63□□□□□ -1.83
HMGB1P42-201ENST00000532126 TRBV30A0A0K0K1B3 111 aa3.62□□□□□ -1.83
HMGB1P42-201ENST00000532126 H3BRM9 83 aa3.62□□□□□ -1.83
HMGB1P42-201ENST00000532126 NMUP48645 174 aa3.62□□□□□ -1.83
HMGB1P42-201ENST00000532126 UBE2AP49459 152 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms