RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 Q5VSD8 79 aa0.89□□□□□ -2.27
USP47-211ENST00000531513 ANKRD50Q9ULJ7 1429 aa0.89□□□□□ -2.27
USP47-211ENST00000531513 DNMBPQ6XZF7 1577 aa0.88□□□□□ -2.27
USP47-211ENST00000531513 CEP170BQ9Y4F5 1589 aaPredicted RBP0.88□□□□□ -2.27
USP47-211ENST00000531513 NOTCH1P46531 2555 aa0.88□□□□□ -2.27
USP47-211ENST00000531513 FBN2P35556 2912 aa0.88□□□□□ -2.27
USP47-211ENST00000531513 KIF20BQ96Q89 1820 aa0.88□□□□□ -2.27
USP47-211ENST00000531513 IFI6P09912 130 aa0.88□□□□□ -2.27
USP47-211ENST00000531513 LRRIQ1Q96JM4 1722 aa0.88□□□□□ -2.27
USP47-211ENST00000531513 ERICH3Q5RHP9 1530 aa0.88□□□□□ -2.27
USP47-211ENST00000531513 CLIP1P30622 1438 aa0.88□□□□□ -2.27
USP47-211ENST00000531513 PPRC1Q5VV67 1664 aaKnown RBP0.88□□□□□ -2.27
USP47-211ENST00000531513 FAM208BQ5VWN6 2430 aa0.87□□□□□ -2.27
USP47-211ENST00000531513 BIVM-ERCC5R4GMW8 1640 aa0.87□□□□□ -2.27
USP47-211ENST00000531513 CPSF4LA6NMK7 179 aaKnown RBP0.87□□□□□ -2.27
USP47-211ENST00000531513 RGPD2P0DJD1 1756 aa0.87□□□□□ -2.27
USP47-211ENST00000531513 CD163L1Q9NR16 1453 aa0.86□□□□□ -2.27
USP47-211ENST00000531513 USP32Q8NFA0 1604 aa0.86□□□□□ -2.27
USP47-211ENST00000531513 ZNF469Q96JG9 3925 aaPredicted RBP0.86□□□□□ -2.27
USP47-211ENST00000531513 LCE6AA0A183 80 aa0.86□□□□□ -2.27
USP47-211ENST00000531513 CCL22O00626 93 aa0.86□□□□□ -2.27
USP47-211ENST00000531513 NREPQ16612 68 aa0.86□□□□□ -2.27
USP47-211ENST00000531513 Q5BKY6 102 aa0.85□□□□□ -2.27
USP47-211ENST00000531513 MYO5CQ9NQX4 1742 aa0.85□□□□□ -2.27
USP47-211ENST00000531513 MEGF8Q7Z7M0 2845 aa0.85□□□□□ -2.27
USP47-211ENST00000531513 LTN1O94822 1766 aa0.85□□□□□ -2.27
USP47-211ENST00000531513 SCN11AQ9UI33 1791 aa0.85□□□□□ -2.27
USP47-211ENST00000531513 RGPD1P0DJD0 1748 aa0.84□□□□□ -2.27
USP47-211ENST00000531513 H3BVH4 76 aa0.84□□□□□ -2.27
USP47-211ENST00000531513 SPINK6Q6UWN8 80 aa0.84□□□□□ -2.27
USP47-211ENST00000531513 IQGAP3Q86VI3 1631 aa0.84□□□□□ -2.28
USP47-211ENST00000531513 QSER1Q2KHR3 1735 aa0.84□□□□□ -2.28
USP47-211ENST00000531513 COX6B2Q6YFQ2 88 aa0.83□□□□□ -2.28
USP47-211ENST00000531513 MRPL34Q9BQ48 92 aaKnown RBP0.83□□□□□ -2.28
USP47-211ENST00000531513 ADAMTS12P58397 1594 aa0.83□□□□□ -2.28
USP47-211ENST00000531513 AHCTF1Q8WYP5 2266 aa0.82□□□□□ -2.28
USP47-211ENST00000531513 UBR3Q6ZT12 1888 aa0.82□□□□□ -2.28
USP47-211ENST00000531513 ANKRD36A6QL64 1941 aa0.82□□□□□ -2.28
USP47-211ENST00000531513 ATXN8Q156A1 80 aa0.82□□□□□ -2.28
USP47-211ENST00000531513 EFCAB5A4FU69 1503 aa0.81□□□□□ -2.28
USP47-211ENST00000531513 A0A087WWC5 75 aa0.81□□□□□ -2.28
USP47-211ENST00000531513 SPRR1AP35321 89 aa0.81□□□□□ -2.28
USP47-211ENST00000531513 ZC3H13Q5T200 1668 aaKnown RBP0.81□□□□□ -2.28
USP47-211ENST00000531513 HFM1A2PYH4 1435 aa0.81□□□□□ -2.28
USP47-211ENST00000531513 GOLGA4Q13439 2230 aaKnown RBP0.8□□□□□ -2.28
USP47-211ENST00000531513 SPRR1BP22528 89 aa0.8□□□□□ -2.28
USP47-211ENST00000531513 POLR1AO95602 1720 aaPredicted RBP0.8□□□□□ -2.28
USP47-211ENST00000531513 LMTK2Q8IWU2 1503 aa0.79□□□□□ -2.28
USP47-211ENST00000531513 ASXL1Q8IXJ9 1541 aa0.79□□□□□ -2.28
USP47-211ENST00000531513 NDUFA4O00483 81 aa0.79□□□□□ -2.28
USP47-211ENST00000531513 SPINK4O60575 86 aa0.79□□□□□ -2.28
USP47-211ENST00000531513 PRH1P02810 166 aa0.79□□□□□ -2.28
USP47-211ENST00000531513 GNG13Q9P2W3 67 aa0.79□□□□□ -2.28
USP47-211ENST00000531513 ZNF831Q5JPB2 1677 aa0.78□□□□□ -2.28
USP47-211ENST00000531513 ARFGEF2Q9Y6D5 1785 aa0.78□□□□□ -2.28
USP47-211ENST00000531513 DEFB105AQ8NG35 78 aa0.78□□□□□ -2.28
USP47-211ENST00000531513 S100ZQ8WXG8 99 aa0.78□□□□□ -2.28
USP47-211ENST00000531513 HILPDAQ9Y5L2 63 aa0.78□□□□□ -2.28
USP47-211ENST00000531513 RALGAPBQ86X10 1494 aa0.78□□□□□ -2.28
USP47-211ENST00000531513 NWD1Q149M9 1564 aa0.78□□□□□ -2.29
USP47-211ENST00000531513 MROH1Q8NDA8 1641 aa0.78□□□□□ -2.29
USP47-211ENST00000531513 CFAP43Q8NDM7 1665 aa0.78□□□□□ -2.29
USP47-211ENST00000531513 COL14A1Q05707 1796 aaKnown RBP0.78□□□□□ -2.29
USP47-211ENST00000531513 ANKRD17O75179 2603 aaKnown RBP0.77□□□□□ -2.29
USP47-211ENST00000531513 CDKN2A-AS1Q9UH64 79 aa0.77□□□□□ -2.29
USP47-211ENST00000531513 CDC42BPGQ6DT37 1551 aa0.77□□□□□ -2.29
USP47-211ENST00000531513 PREX1Q8TCU6 1659 aa0.77□□□□□ -2.29
USP47-211ENST00000531513 CACNA1HO95180 2353 aa0.77□□□□□ -2.29
USP47-211ENST00000531513 TTC28Q96AY4 2481 aa0.77□□□□□ -2.29
USP47-211ENST00000531513 TIAM2Q8IVF5 1701 aa0.76□□□□□ -2.29
USP47-211ENST00000531513 EIF2AK4Q9P2K8 1649 aaKnown RBP0.76□□□□□ -2.29
USP47-211ENST00000531513 INO80Q9ULG1 1556 aaPredicted RBP0.76□□□□□ -2.29
USP47-211ENST00000531513 FRAS1Q86XX4 4008 aa0.76□□□□□ -2.29
USP47-211ENST00000531513 MRPL33O75394 65 aaKnown RBP0.76□□□□□ -2.29
USP47-211ENST00000531513 KRTAP2-3P0C7H8 128 aa0.76□□□□□ -2.29
USP47-211ENST00000531513 SMR3AQ99954 134 aa0.76□□□□□ -2.29
USP47-211ENST00000531513 KRTAP2-4Q9BYR9 128 aa0.76□□□□□ -2.29
USP47-211ENST00000531513 KRTAP2-1Q9BYU5 128 aa0.76□□□□□ -2.29
USP47-211ENST00000531513 FMN2Q9NZ56 1722 aa0.75□□□□□ -2.29
USP47-211ENST00000531513 CICQ96RK0 1608 aaPredicted RBP0.75□□□□□ -2.29
USP47-211ENST00000531513 SPINK1P00995 79 aa0.75□□□□□ -2.29
USP47-211ENST00000531513 DEFB109BQ30KR1 87 aa0.75□□□□□ -2.29
USP47-211ENST00000531513 APLNQ9ULZ1 77 aa0.75□□□□□ -2.29
USP47-211ENST00000531513 TENM3Q9P273 2699 aa0.75□□□□□ -2.29
USP47-211ENST00000531513 BCORQ6W2J9 1755 aa0.75□□□□□ -2.29
USP47-211ENST00000531513 DOT1LQ8TEK3 1739 aa0.75□□□□□ -2.29
USP47-211ENST00000531513 GPR98Q8WXG9 6306 aa0.75□□□□□ -2.29
USP47-211ENST00000531513 UBL5Q9BZL1 73 aa0.74□□□□□ -2.29
USP47-211ENST00000531513 DIP2AQ14689 1571 aa0.74□□□□□ -2.29
USP47-211ENST00000531513 NHSQ6T4R5 1651 aa0.73□□□□□ -2.29
USP47-211ENST00000531513 ENHOQ6UWT2 76 aa0.73□□□□□ -2.29
USP47-211ENST00000531513 FXYD6Q9H0Q3 95 aa0.73□□□□□ -2.29
USP47-211ENST00000531513 ABCA9Q8IUA7 1624 aa0.73□□□□□ -2.29
USP47-211ENST00000531513 BDP1A6H8Y1 2624 aa0.73□□□□□ -2.29
USP47-211ENST00000531513 PLCH1Q4KWH8 1693 aa0.72□□□□□ -2.29
USP47-211ENST00000531513 URB1O60287 2271 aaKnown RBP0.72□□□□□ -2.29
USP47-211ENST00000531513 AHNAKQ09666 5890 aaKnown RBP0.72□□□□□ -2.29
USP47-211ENST00000531513 MADDQ8WXG6 1647 aa0.72□□□□□ -2.29
USP47-211ENST00000531513 DEFB131BA0A096LNP1 70 aa0.72□□□□□ -2.29
USP47-211ENST00000531513 C3orf79P0CE67 100 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms