RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 CFC1BP0CG36 223 aa5.87□□□□□ -1.47
CHMP4A-205ENST00000531158 CFC1P0CG37 223 aa5.87□□□□□ -1.47
CHMP4A-205ENST00000531158 GEMIN7Q9H840 131 aaKnown RBP5.87□□□□□ -1.47
CHMP4A-205ENST00000531158 A4D1N5 150 aa5.86□□□□□ -1.47
CHMP4A-205ENST00000531158 PCP4P48539 62 aa5.86□□□□□ -1.47
CHMP4A-205ENST00000531158 MIAQ16674 131 aa5.86□□□□□ -1.47
CHMP4A-205ENST00000531158 SDIM1Q6ZPB5 146 aa5.86□□□□□ -1.47
CHMP4A-205ENST00000531158 C9orf163Q8N9P6 203 aa5.86□□□□□ -1.47
CHMP4A-205ENST00000531158 LITAFQ99732 161 aa5.86□□□□□ -1.47
CHMP4A-205ENST00000531158 PPDPFQ9H3Y8 114 aa5.86□□□□□ -1.47
CHMP4A-205ENST00000531158 NDUFA12Q9UI09 145 aa5.86□□□□□ -1.47
CHMP4A-205ENST00000531158 IGLV5-39A0A0G2JS06 123 aa5.85□□□□□ -1.47
CHMP4A-205ENST00000531158 NDUFA1O15239 70 aa5.85□□□□□ -1.47
CHMP4A-205ENST00000531158 IFITM1P13164 125 aa5.85□□□□□ -1.47
CHMP4A-205ENST00000531158 CIRBPQ14011 172 aaKnown RBP5.85□□□□□ -1.47
CHMP4A-205ENST00000531158 DGAT2L7PQ6IED9 249 aa5.85□□□□□ -1.47
CHMP4A-205ENST00000531158 C1orf43Q9BWL3 253 aa5.85□□□□□ -1.47
CHMP4A-205ENST00000531158 MUC2Q02817 5179 aa5.85□□□□□ -1.47
CHMP4A-205ENST00000531158 IGHV3-64A0A075B6Q5 118 aa5.84□□□□□ -1.47
CHMP4A-205ENST00000531158 TRBV6-8A0A0A6YYG3 113 aa5.84□□□□□ -1.47
CHMP4A-205ENST00000531158 LOC107984156A0A0G2JMH3 177 aa5.84□□□□□ -1.47
CHMP4A-205ENST00000531158 C14orf177Q52M58 125 aa5.84□□□□□ -1.47
CHMP4A-205ENST00000531158 Q6ZRU5 148 aa5.84□□□□□ -1.47
CHMP4A-205ENST00000531158 NTM-AS1Q6ZSK4 140 aa5.84□□□□□ -1.47
CHMP4A-205ENST00000531158 MUSTN1Q8IVN3 82 aa5.84□□□□□ -1.47
CHMP4A-205ENST00000531158 ARL17AQ8IVW1 177 aa5.84□□□□□ -1.47
CHMP4A-205ENST00000531158 COPS9Q8WXC6 57 aa5.84□□□□□ -1.47
CHMP4A-205ENST00000531158 SLPIP03973 132 aa5.83□□□□□ -1.48
CHMP4A-205ENST00000531158 SPINK8P0C7L1 97 aa5.83□□□□□ -1.48
CHMP4A-205ENST00000531158 CHTF8P0CG12 524 aa5.83□□□□□ -1.48
CHMP4A-205ENST00000531158 RNASE13Q5GAN3 156 aaKnown RBP5.83□□□□□ -1.48
CHMP4A-205ENST00000531158 CLPSL2Q6UWE3 100 aa5.83□□□□□ -1.48
CHMP4A-205ENST00000531158 LINC01600Q96MT4 127 aa5.83□□□□□ -1.48
CHMP4A-205ENST00000531158 TMEM243Q9BU79 118 aa5.83□□□□□ -1.48
CHMP4A-205ENST00000531158 PRR34Q9NV39 138 aa5.83□□□□□ -1.48
CHMP4A-205ENST00000531158 CDKN2A-AS1Q9UH64 79 aa5.83□□□□□ -1.48
CHMP4A-205ENST00000531158 ERG28Q9UKR5 140 aa5.83□□□□□ -1.48
CHMP4A-205ENST00000531158 LPAP08519 4548 aa5.82□□□□□ -1.48
CHMP4A-205ENST00000531158 TRBV30A0A0K0K1B3 111 aa5.82□□□□□ -1.48
CHMP4A-205ENST00000531158 EIF4EBP3O60516 100 aaPredicted RBP5.82□□□□□ -1.48
CHMP4A-205ENST00000531158 TCL1BO95988 128 aa5.82□□□□□ -1.48
CHMP4A-205ENST00000531158 CRPP02741 224 aa5.82□□□□□ -1.48
CHMP4A-205ENST00000531158 ANGP03950 147 aaKnown RBP5.82□□□□□ -1.48
CHMP4A-205ENST00000531158 PSMB2P49721 201 aa5.82□□□□□ -1.48
CHMP4A-205ENST00000531158 HERV-K104P63124 156 aa5.82□□□□□ -1.48
CHMP4A-205ENST00000531158 LINC00242Q5T6M2 205 aa5.82□□□□□ -1.48
CHMP4A-205ENST00000531158 TEN1Q86WV5 123 aa5.82□□□□□ -1.48
CHMP4A-205ENST00000531158 TMEM101Q96IK0 257 aa5.82□□□□□ -1.48
CHMP4A-205ENST00000531158 CDC42SE2Q9NRR3 84 aa5.82□□□□□ -1.48
CHMP4A-205ENST00000531158 SMIM1B2RUZ4 78 aa5.81□□□□□ -1.48
CHMP4A-205ENST00000531158 TMEM262E9PQX1 116 aa5.81□□□□□ -1.48
CHMP4A-205ENST00000531158 UBE2L6O14933 153 aa5.81□□□□□ -1.48
CHMP4A-205ENST00000531158 ETDBQ3ZM63 59 aa5.81□□□□□ -1.48
CHMP4A-205ENST00000531158 A0A087WYN8 130 aa5.8□□□□□ -1.48
CHMP4A-205ENST00000531158 SCGB1A1P11684 91 aa5.8□□□□□ -1.48
CHMP4A-205ENST00000531158 SMCPP49901 116 aaPredicted RBP5.8□□□□□ -1.48
CHMP4A-205ENST00000531158 CNBPP62633 177 aaKnown RBP5.8□□□□□ -1.48
CHMP4A-205ENST00000531158 FOXI1Q12951 378 aa5.8□□□□□ -1.48
CHMP4A-205ENST00000531158 ATXN8Q156A1 80 aa5.8□□□□□ -1.48
CHMP4A-205ENST00000531158 LINC00269Q8N2A0 174 aa5.8□□□□□ -1.48
CHMP4A-205ENST00000531158 SPACA4Q8TDM5 124 aa5.8□□□□□ -1.48
CHMP4A-205ENST00000531158 PPDPFLQ8WWR9 84 aa5.8□□□□□ -1.48
CHMP4A-205ENST00000531158 CHCHD5Q9BSY4 110 aa5.8□□□□□ -1.48
CHMP4A-205ENST00000531158 IGLV10-54A0A075B6I4 117 aa5.79□□□□□ -1.48
CHMP4A-205ENST00000531158 SCGB1C2P0DMR2 95 aa5.79□□□□□ -1.48
CHMP4A-205ENST00000531158 Q1RN00 199 aa5.79□□□□□ -1.48
CHMP4A-205ENST00000531158 ZNF625Q96I27 306 aaPredicted RBP5.79□□□□□ -1.48
CHMP4A-205ENST00000531158 COX6CP09669 75 aa5.78□□□□□ -1.48
CHMP4A-205ENST00000531158 COX6A2Q02221 97 aa5.78□□□□□ -1.48
CHMP4A-205ENST00000531158 GAGE6Q13070 117 aa5.78□□□□□ -1.48
CHMP4A-205ENST00000531158 ADAMTSL4-AS1Q5T5F5 129 aa5.78□□□□□ -1.48
CHMP4A-205ENST00000531158 SFTA2Q6UW10 78 aa5.78□□□□□ -1.48
CHMP4A-205ENST00000531158 MTURNQ8N3F0 131 aa5.78□□□□□ -1.48
CHMP4A-205ENST00000531158 TRAV13-1A0A0B4J241 112 aa5.77□□□□□ -1.49
CHMP4A-205ENST00000531158 GAGE12HA6NDE8 117 aa5.77□□□□□ -1.49
CHMP4A-205ENST00000531158 H3BT86 120 aa5.77□□□□□ -1.49
CHMP4A-205ENST00000531158 TRIAP1O43715 76 aa5.77□□□□□ -1.49
CHMP4A-205ENST00000531158 SLC25A20O43772 301 aa5.77□□□□□ -1.49
CHMP4A-205ENST00000531158 PLAC8Q9NZF1 115 aa5.77□□□□□ -1.49
CHMP4A-205ENST00000531158 TRBV10-2A0A0K0K1G8 114 aa5.76□□□□□ -1.49
CHMP4A-205ENST00000531158 PRSS2P07478 247 aa5.76□□□□□ -1.49
CHMP4A-205ENST00000531158 RPL13AP40429 203 aaKnown RBP5.76□□□□□ -1.49
CHMP4A-205ENST00000531158 REG3AQ06141 175 aa5.76□□□□□ -1.49
CHMP4A-205ENST00000531158 ANKRD29Q8N6D5 301 aa5.76□□□□□ -1.49
CHMP4A-205ENST00000531158 LINC00308Q8TCZ7 52 aa5.76□□□□□ -1.49
CHMP4A-205ENST00000531158 SIGMAR1Q99720 223 aa5.76□□□□□ -1.49
CHMP4A-205ENST00000531158 FSIP2Q5CZC0 6907 aa5.76□□□□□ -1.49
CHMP4A-205ENST00000531158 IGLV4-60A0A075B6I1 120 aa5.75□□□□□ -1.49
CHMP4A-205ENST00000531158 C9JAW5 83 aa5.75□□□□□ -1.49
CHMP4A-205ENST00000531158 LST1O00453 97 aa5.75□□□□□ -1.49
CHMP4A-205ENST00000531158 KRTAP10-8P60410 259 aa5.75□□□□□ -1.49
CHMP4A-205ENST00000531158 PRR3P79522 188 aaKnown RBP5.75□□□□□ -1.49
CHMP4A-205ENST00000531158 MEIG1Q5JSS6 88 aa5.75□□□□□ -1.49
CHMP4A-205ENST00000531158 LINC01561Q8N1V8 128 aa5.75□□□□□ -1.49
CHMP4A-205ENST00000531158 C15orf56Q8N910 161 aa5.75□□□□□ -1.49
CHMP4A-205ENST00000531158 A0A0U1RQV1 116 aa5.74□□□□□ -1.49
CHMP4A-205ENST00000531158 H7C2G1 150 aa5.74□□□□□ -1.49
CHMP4A-205ENST00000531158 CFAP161Q6P656 301 aa5.74□□□□□ -1.49
CHMP4A-205ENST00000531158 COX7B2Q8TF08 81 aa5.74□□□□□ -1.49
CHMP4A-205ENST00000531158 A0A087WZ39 114 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms