RNA–Protein interactions for RNA: ENST00000529848.1

SVIP-203, Transcript of small VCP interacting protein, humanhuman

TSL 5

Gene SVIP, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-203ENST00000529848 PSENENQ9NZ42 101 aa1.33□□□□□ -2.2
SVIP-203ENST00000529848 PRO1854Q9UHT4 67 aa1.33□□□□□ -2.2
SVIP-203ENST00000529848 LHFPL6Q9Y693 200 aa1.33□□□□□ -2.2
SVIP-203ENST00000529848 KNTC1P50748 2209 aa1.33□□□□□ -2.2
SVIP-203ENST00000529848 BPTFQ12830 3046 aa1.33□□□□□ -2.2
SVIP-203ENST00000529848 FREM3P0C091 2139 aa1.33□□□□□ -2.2
SVIP-203ENST00000529848 MYO7BQ6PIF6 2116 aa1.33□□□□□ -2.2
SVIP-203ENST00000529848 CFAP46Q8IYW2 2715 aa1.32□□□□□ -2.2
SVIP-203ENST00000529848 LRRK2Q5S007 2527 aa1.32□□□□□ -2.2
SVIP-203ENST00000529848 ABCA12Q86UK0 2595 aa1.32□□□□□ -2.2
SVIP-203ENST00000529848 F8P00451 2351 aa1.32□□□□□ -2.2
SVIP-203ENST00000529848 TRBV7-3A0A075B6L6 115 aa1.32□□□□□ -2.2
SVIP-203ENST00000529848 IGLV3-32A0A0A0MS00 114 aa1.32□□□□□ -2.2
SVIP-203ENST00000529848 PIGBOS1A0A0B4J2F0 54 aa1.32□□□□□ -2.2
SVIP-203ENST00000529848 MYMXA0A1B0GTQ4 84 aa1.32□□□□□ -2.2
SVIP-203ENST00000529848 CLPSL1A2RUU4 121 aa1.32□□□□□ -2.2
SVIP-203ENST00000529848 C2orf70A6NJV1 201 aa1.32□□□□□ -2.2
SVIP-203ENST00000529848 HMGN2P05204 90 aaKnown RBP1.32□□□□□ -2.2
SVIP-203ENST00000529848 UBE2D1P51668 147 aa1.32□□□□□ -2.2
SVIP-203ENST00000529848 ESPL1Q14674 2120 aa1.32□□□□□ -2.2
SVIP-203ENST00000529848 CSAG1Q6PB30 78 aa1.32□□□□□ -2.2
SVIP-203ENST00000529848 ZGRF1Q86YA3 2104 aa1.32□□□□□ -2.2
SVIP-203ENST00000529848 IFI27L1Q96BM0 104 aa1.32□□□□□ -2.2
SVIP-203ENST00000529848 HEATR1Q9H583 2144 aaKnown RBP1.32□□□□□ -2.2
SVIP-203ENST00000529848 CDC42SE2Q9NRR3 84 aa1.32□□□□□ -2.2
SVIP-203ENST00000529848 FREM1Q5H8C1 2179 aa1.32□□□□□ -2.2
SVIP-203ENST00000529848 UBR5O95071 2799 aaPredicted RBP1.32□□□□□ -2.2
SVIP-203ENST00000529848 PIEZO2Q9H5I5 2752 aa1.32□□□□□ -2.2
SVIP-203ENST00000529848 LAMA1P25391 3075 aa1.32□□□□□ -2.2
SVIP-203ENST00000529848 KALRNO60229 2985 aa1.32□□□□□ -2.2
SVIP-203ENST00000529848 BSNQ9UPA5 3926 aa1.31□□□□□ -2.2
SVIP-203ENST00000529848 MED13LQ71F56 2210 aa1.31□□□□□ -2.2
SVIP-203ENST00000529848 USP9YO00507 2555 aaPredicted RBP1.31□□□□□ -2.2
SVIP-203ENST00000529848 KNL1Q8NG31 2342 aa1.31□□□□□ -2.2
SVIP-203ENST00000529848 PCNX1Q96RV3 2341 aa1.31□□□□□ -2.2
SVIP-203ENST00000529848 TRAV10A0A0B4J240 114 aa1.31□□□□□ -2.2
SVIP-203ENST00000529848 TRAV12-3A0A0B4J271 114 aa1.31□□□□□ -2.2
SVIP-203ENST00000529848 IGKV3D-7A0A0C4DH55 119 aa1.31□□□□□ -2.2
SVIP-203ENST00000529848 IGKV3OR2-268A0A0C4DH90 116 aa1.31□□□□□ -2.2
SVIP-203ENST00000529848 TMEM30CPA0ZSE6 113 aa1.31□□□□□ -2.2
SVIP-203ENST00000529848 A6NIN4 97 aa1.31□□□□□ -2.2
SVIP-203ENST00000529848 CHKB-CPT1BH3BT56 60 aa1.31□□□□□ -2.2
SVIP-203ENST00000529848 ANGP03950 147 aaKnown RBP1.31□□□□□ -2.2
SVIP-203ENST00000529848 SPINT3P49223 89 aa1.31□□□□□ -2.2
SVIP-203ENST00000529848 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.31□□□□□ -2.2
SVIP-203ENST00000529848 C6orf201Q7Z4U5 140 aa1.31□□□□□ -2.2
SVIP-203ENST00000529848 BAGE3Q86Y29 109 aa1.31□□□□□ -2.2
SVIP-203ENST00000529848 BAGE2Q86Y30 109 aa1.31□□□□□ -2.2
SVIP-203ENST00000529848 FAM103A1Q9BTL3 118 aaKnown RBP1.31□□□□□ -2.2
SVIP-203ENST00000529848 C22orf24Q9Y442 160 aa1.31□□□□□ -2.2
SVIP-203ENST00000529848 ARL2-SNX15V9GYD0 113 aa1.31□□□□□ -2.2
SVIP-203ENST00000529848 NBASA2RRP1 2371 aa1.31□□□□□ -2.2
SVIP-203ENST00000529848 TEX15Q9BXT5 2789 aa1.31□□□□□ -2.2
SVIP-203ENST00000529848 SPTBP11277 2137 aa1.31□□□□□ -2.2
SVIP-203ENST00000529848 TLN1Q9Y490 2541 aaKnown RBP1.31□□□□□ -2.2
SVIP-203ENST00000529848 RP1P56715 2156 aa1.3□□□□□ -2.2
SVIP-203ENST00000529848 IGKV2-40A0A087WW87 121 aaPredicted RBP1.3□□□□□ -2.2
SVIP-203ENST00000529848 LOC285095A0A1B0GVY8 99 aa1.3□□□□□ -2.2
SVIP-203ENST00000529848 A0A1B0GWA3 101 aa1.3□□□□□ -2.2
SVIP-203ENST00000529848 TMEM14DPA8MWL7 114 aa1.3□□□□□ -2.2
SVIP-203ENST00000529848 IGKV2D-40P01614 121 aaPredicted RBP1.3□□□□□ -2.2
SVIP-203ENST00000529848 BAALC-AS2P0C853 105 aa1.3□□□□□ -2.2
SVIP-203ENST00000529848 S100A3P33764 101 aa1.3□□□□□ -2.2
SVIP-203ENST00000529848 EDDM3BP56851 147 aa1.3□□□□□ -2.2
SVIP-203ENST00000529848 SMIM11AP58511 58 aa1.3□□□□□ -2.2
SVIP-203ENST00000529848 C10orf128Q5T292 105 aa1.3□□□□□ -2.2
SVIP-203ENST00000529848 GDF5OSQ5U4N7 250 aa1.3□□□□□ -2.2
SVIP-203ENST00000529848 Q6JHZ5 121 aa1.3□□□□□ -2.2
SVIP-203ENST00000529848 ZNF818PQ6ZRF7 136 aa1.3□□□□□ -2.2
SVIP-203ENST00000529848 ZNF833PQ6ZTB9 187 aa1.3□□□□□ -2.2
SVIP-203ENST00000529848 LIMD2Q9BT23 127 aa1.3□□□□□ -2.2
SVIP-203ENST00000529848 DYNLRB1Q9NP97 96 aa1.3□□□□□ -2.2
SVIP-203ENST00000529848 NDUFA4L2Q9NRX3 87 aa1.3□□□□□ -2.2
SVIP-203ENST00000529848 TMEM14BQ9NUH8 114 aa1.3□□□□□ -2.2
SVIP-203ENST00000529848 UBE2D4Q9Y2X8 147 aa1.3□□□□□ -2.2
SVIP-203ENST00000529848 MGAQ8IWI9 3026 aa1.3□□□□□ -2.2
SVIP-203ENST00000529848 ATMQ13315 3056 aa1.3□□□□□ -2.2
SVIP-203ENST00000529848 ITPR3Q14573 2671 aa1.3□□□□□ -2.2
SVIP-203ENST00000529848 MED12Q93074 2177 aa1.3□□□□□ -2.2
SVIP-203ENST00000529848 HIVEP3Q5T1R4 2406 aa1.29□□□□□ -2.2
SVIP-203ENST00000529848 ABCA2Q9BZC7 2435 aa1.29□□□□□ -2.2
SVIP-203ENST00000529848 RELNP78509 3460 aa1.29□□□□□ -2.2
SVIP-203ENST00000529848 FBN2P35556 2912 aa1.29□□□□□ -2.2
SVIP-203ENST00000529848 TRBV6-7A0A0A0MS04 114 aa1.29□□□□□ -2.2
SVIP-203ENST00000529848 TRAV12-1A0A0B4J245 112 aa1.29□□□□□ -2.2
SVIP-203ENST00000529848 LOC101927531A0A1B0GV80 90 aa1.29□□□□□ -2.2
SVIP-203ENST00000529848 CEBPZOSA8MTT3 80 aa1.29□□□□□ -2.2
SVIP-203ENST00000529848 ERC2-IT1O76042 136 aa1.29□□□□□ -2.2
SVIP-203ENST00000529848 COX6CP09669 75 aa1.29□□□□□ -2.2
SVIP-203ENST00000529848 ARL14EPLP0DKL9 152 aa1.29□□□□□ -2.2
SVIP-203ENST00000529848 PLGLAQ15195 96 aa1.29□□□□□ -2.2
SVIP-203ENST00000529848 DEFB133Q30KQ1 61 aa1.29□□□□□ -2.2
SVIP-203ENST00000529848 NCBP2-AS2Q69YL0 99 aa1.29□□□□□ -2.2
SVIP-203ENST00000529848 UNQ6190/PRO20217Q6UXQ8 127 aa1.29□□□□□ -2.2
SVIP-203ENST00000529848 NDUFA11Q86Y39 141 aa1.29□□□□□ -2.2
SVIP-203ENST00000529848 DEFB107AQ8IZN7 70 aa1.29□□□□□ -2.2
SVIP-203ENST00000529848 CLECL1Q8IZS7 167 aa1.29□□□□□ -2.2
SVIP-203ENST00000529848 TMEM254Q8TBM7 123 aa1.29□□□□□ -2.2
SVIP-203ENST00000529848 U3KQA8 63 aa1.29□□□□□ -2.2
SVIP-203ENST00000529848 POLQO75417 2590 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms