RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 LINC01600Q96MT4 127 aa4.3□□□□□ -1.72
ATPAF1-209ENST00000529214 TMEM243Q9BU79 118 aa4.3□□□□□ -1.72
ATPAF1-209ENST00000529214 OSTCQ9NRP0 149 aa4.3□□□□□ -1.72
ATPAF1-209ENST00000529214 H0Y9J4 135 aa4.29□□□□□ -1.72
ATPAF1-209ENST00000529214 HBDP02042 147 aa4.29□□□□□ -1.72
ATPAF1-209ENST00000529214 LINC00315P59091 139 aa4.29□□□□□ -1.72
ATPAF1-209ENST00000529214 FAM74A4Q5TZK3 123 aa4.29□□□□□ -1.72
ATPAF1-209ENST00000529214 LINC00643Q86TS7 51 aa4.29□□□□□ -1.72
ATPAF1-209ENST00000529214 C14orf178Q8N769 122 aaPredicted RBP4.29□□□□□ -1.72
ATPAF1-209ENST00000529214 FAM218AQ96MZ4 157 aa4.29□□□□□ -1.72
ATPAF1-209ENST00000529214 CNFNQ9BYD5 112 aa4.29□□□□□ -1.72
ATPAF1-209ENST00000529214 KIF25-AS1Q9Y6Z4 181 aa4.29□□□□□ -1.72
ATPAF1-209ENST00000529214 NACAE9PAV3 2078 aa4.29□□□□□ -1.72
ATPAF1-209ENST00000529214 IGLV5-39A0A0G2JS06 123 aa4.28□□□□□ -1.72
ATPAF1-209ENST00000529214 COX7A2LO14548 114 aa4.28□□□□□ -1.72
ATPAF1-209ENST00000529214 C10orf25Q5T742 122 aa4.28□□□□□ -1.72
ATPAF1-209ENST00000529214 GFRA4Q9GZZ7 299 aa4.28□□□□□ -1.72
ATPAF1-209ENST00000529214 V9GYV3 84 aa4.28□□□□□ -1.72
ATPAF1-209ENST00000529214 IGLV2-18A0A075B6J9 118 aa4.27□□□□□ -1.73
ATPAF1-209ENST00000529214 TRBV10-1A0A0K0K1A3 114 aa4.27□□□□□ -1.73
ATPAF1-209ENST00000529214 M0R2N4 97 aa4.27□□□□□ -1.73
ATPAF1-209ENST00000529214 SLC25A20O43772 301 aa4.27□□□□□ -1.73
ATPAF1-209ENST00000529214 NPYP01303 97 aa4.27□□□□□ -1.73
ATPAF1-209ENST00000529214 UBE2D3P61077 147 aa4.27□□□□□ -1.73
ATPAF1-209ENST00000529214 UBE2D2P62837 147 aa4.27□□□□□ -1.73
ATPAF1-209ENST00000529214 TWIST1Q15672 202 aa4.27□□□□□ -1.73
ATPAF1-209ENST00000529214 FAM104BQ5XKR9 115 aa4.27□□□□□ -1.73
ATPAF1-209ENST00000529214 Q6ZR54 194 aa4.27□□□□□ -1.73
ATPAF1-209ENST00000529214 PHF5AQ7RTV0 110 aaKnown RBP4.27□□□□□ -1.73
ATPAF1-209ENST00000529214 LINC00337Q8N6G1 96 aa4.27□□□□□ -1.73
ATPAF1-209ENST00000529214 Q8N8P6 123 aa4.27□□□□□ -1.73
ATPAF1-209ENST00000529214 UBE2WQ96B02 151 aa4.27□□□□□ -1.73
ATPAF1-209ENST00000529214 DNAH2Q9P225 4427 aa4.27□□□□□ -1.73
ATPAF1-209ENST00000529214 DNAH10Q8IVF4 4471 aa4.26□□□□□ -1.73
ATPAF1-209ENST00000529214 TRBV7-3A0A075B6L6 115 aa4.26□□□□□ -1.73
ATPAF1-209ENST00000529214 NBDYA0A0U1RRE5 68 aa4.26□□□□□ -1.73
ATPAF1-209ENST00000529214 MYMXA0A1B0GTQ4 84 aa4.26□□□□□ -1.73
ATPAF1-209ENST00000529214 LOC389332A0A1B0GUA5 103 aa4.26□□□□□ -1.73
ATPAF1-209ENST00000529214 HIGD1CA8MV81 97 aa4.26□□□□□ -1.73
ATPAF1-209ENST00000529214 TSHBP01222 138 aa4.26□□□□□ -1.73
ATPAF1-209ENST00000529214 UBE2BP63146 152 aa4.26□□□□□ -1.73
ATPAF1-209ENST00000529214 SMIM27A0A1W2PRY6 76 aa4.25□□□□□ -1.73
ATPAF1-209ENST00000529214 M0QY20 66 aa4.25□□□□□ -1.73
ATPAF1-209ENST00000529214 LINC00313P59037 77 aa4.25□□□□□ -1.73
ATPAF1-209ENST00000529214 RPL36AP83881 106 aaKnown RBP4.25□□□□□ -1.73
ATPAF1-209ENST00000529214 RBM3P98179 157 aaKnown RBP4.25□□□□□ -1.73
ATPAF1-209ENST00000529214 NTN5Q8WTR8 489 aaPredicted RBP4.25□□□□□ -1.73
ATPAF1-209ENST00000529214 RPL36ALQ969Q0 106 aaKnown RBP4.25□□□□□ -1.73
ATPAF1-209ENST00000529214 A0A1B0GUT8 65 aa4.24□□□□□ -1.73
ATPAF1-209ENST00000529214 CCKP06307 115 aa4.24□□□□□ -1.73
ATPAF1-209ENST00000529214 LINC00242Q5T6M2 205 aa4.24□□□□□ -1.73
ATPAF1-209ENST00000529214 LELP1Q5T871 98 aa4.24□□□□□ -1.73
ATPAF1-209ENST00000529214 WFDC10BQ8IUB3 73 aa4.24□□□□□ -1.73
ATPAF1-209ENST00000529214 NKAPP1Q8N9T2 125 aa4.24□□□□□ -1.73
ATPAF1-209ENST00000529214 RNF185Q96GF1 192 aa4.24□□□□□ -1.73
ATPAF1-209ENST00000529214 IGHV3-38A0A0C4DH36 116 aa4.24□□□□□ -1.73
ATPAF1-209ENST00000529214 LOC107984156A0A0G2JMH3 177 aa4.24□□□□□ -1.73
ATPAF1-209ENST00000529214 MGPP08493 103 aa4.24□□□□□ -1.73
ATPAF1-209ENST00000529214 DNAH10OSP0CZ25 163 aa4.24□□□□□ -1.73
ATPAF1-209ENST00000529214 C6orf99Q4VX62 202 aa4.24□□□□□ -1.73
ATPAF1-209ENST00000529214 C1orf134Q5TEV5 83 aa4.24□□□□□ -1.73
ATPAF1-209ENST00000529214 C7orf65Q6ZTY9 151 aa4.24□□□□□ -1.73
ATPAF1-209ENST00000529214 ARL17AQ8IVW1 177 aa4.24□□□□□ -1.73
ATPAF1-209ENST00000529214 PRSS3P2Q8NHM4 247 aa4.24□□□□□ -1.73
ATPAF1-209ENST00000529214 OPRPNQ99935 248 aaPredicted RBP4.24□□□□□ -1.73
ATPAF1-209ENST00000529214 LINC00474Q9P2X8 69 aa4.24□□□□□ -1.73
ATPAF1-209ENST00000529214 DNAH17Q9UFH2 4485 aa4.23□□□□□ -1.73
ATPAF1-209ENST00000529214 FRAS1Q86XX4 4008 aa4.23□□□□□ -1.73
ATPAF1-209ENST00000529214 IGHV3OR16-9A0A0B4J2B5 98 aa4.23□□□□□ -1.73
ATPAF1-209ENST00000529214 RTL8CO15255 209 aa4.23□□□□□ -1.73
ATPAF1-209ENST00000529214 CIRBPQ14011 172 aaKnown RBP4.23□□□□□ -1.73
ATPAF1-209ENST00000529214 S100A7L2Q5SY68 101 aa4.23□□□□□ -1.73
ATPAF1-209ENST00000529214 KRTAP1-5Q9BYS1 174 aa4.23□□□□□ -1.73
ATPAF1-209ENST00000529214 FAT2Q9NYQ8 4349 aa4.22□□□□□ -1.73
ATPAF1-209ENST00000529214 TRBV6-8A0A0A6YYG3 113 aa4.22□□□□□ -1.73
ATPAF1-209ENST00000529214 PRSS2P07478 247 aa4.22□□□□□ -1.73
ATPAF1-209ENST00000529214 CKS2P33552 79 aa4.22□□□□□ -1.73
ATPAF1-209ENST00000529214 FUSP35637 526 aaKnown RBP eCLIP4.22□□□□□ -1.73
ATPAF1-209ENST00000529214 LINC01556Q5JQF7 62 aa4.22□□□□□ -1.73
ATPAF1-209ENST00000529214 NTM-AS1Q6ZSK4 140 aa4.22□□□□□ -1.73
ATPAF1-209ENST00000529214 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.21□□□□□ -1.74
ATPAF1-209ENST00000529214 IBA57-AS1B1ANH7 110 aa4.21□□□□□ -1.74
ATPAF1-209ENST00000529214 PRR3P79522 188 aaKnown RBP4.21□□□□□ -1.74
ATPAF1-209ENST00000529214 CXCL6P80162 114 aa4.21□□□□□ -1.74
ATPAF1-209ENST00000529214 IFI27L1Q96BM0 104 aa4.21□□□□□ -1.74
ATPAF1-209ENST00000529214 A0A0J9YXV3 536 aa4.2□□□□□ -1.74
ATPAF1-209ENST00000529214 TRBV6-5A0A0K0K1A5 114 aa4.2□□□□□ -1.74
ATPAF1-209ENST00000529214 NDUFC1O43677 76 aa4.2□□□□□ -1.74
ATPAF1-209ENST00000529214 GAS8-AS1O95177 125 aa4.2□□□□□ -1.74
ATPAF1-209ENST00000529214 IGHV3-30P01768 117 aa4.2□□□□□ -1.74
ATPAF1-209ENST00000529214 IGHV3-33P01772 117 aa4.2□□□□□ -1.74
ATPAF1-209ENST00000529214 IGHV3-30-3P0DP02 117 aa4.2□□□□□ -1.74
ATPAF1-209ENST00000529214 IGHV3-30-5P0DP03 117 aa4.2□□□□□ -1.74
ATPAF1-209ENST00000529214 UBE2AP49459 152 aa4.2□□□□□ -1.74
ATPAF1-209ENST00000529214 LINC00173Q6ZV60 143 aa4.2□□□□□ -1.74
ATPAF1-209ENST00000529214 RPL39LQ96EH5 51 aaKnown RBP4.2□□□□□ -1.74
ATPAF1-209ENST00000529214 ZNF706Q9Y5V0 76 aaPredicted RBP4.2□□□□□ -1.74
ATPAF1-209ENST00000529214 EPPK1P58107 5090 aaKnown RBP4.2□□□□□ -1.74
ATPAF1-209ENST00000529214 TRBV25-1A0A075B6N4 114 aa4.19□□□□□ -1.74
ATPAF1-209ENST00000529214 TRBV10-2A0A0K0K1G8 114 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms