RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 GNGT1P63211 74 aa0.19□□□□□ -2.38
BRCA2-203ENST00000528762 HMGN3Q15651 99 aa0.19□□□□□ -2.38
BRCA2-203ENST00000528762 KLK9Q2XQG4 91 aa0.19□□□□□ -2.38
BRCA2-203ENST00000528762 C6orf201Q7Z4U5 140 aa0.19□□□□□ -2.38
BRCA2-203ENST00000528762 Q9H521 79 aa0.19□□□□□ -2.38
BRCA2-203ENST00000528762 CEP162Q5TB80 1403 aa0.19□□□□□ -2.38
BRCA2-203ENST00000528762 CUX1P39880 1505 aa0.18□□□□□ -2.38
BRCA2-203ENST00000528762 CCDC141Q6ZP82 1450 aa0.18□□□□□ -2.38
BRCA2-203ENST00000528762 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.18□□□□□ -2.38
BRCA2-203ENST00000528762 ETDBQ3ZM63 59 aa0.18□□□□□ -2.38
BRCA2-203ENST00000528762 PPLO60437 1756 aa0.18□□□□□ -2.38
BRCA2-203ENST00000528762 RGPD1P0DJD0 1748 aa0.18□□□□□ -2.38
BRCA2-203ENST00000528762 MAP1BP46821 2468 aaKnown RBP0.18□□□□□ -2.38
BRCA2-203ENST00000528762 LPAP08519 4548 aa0.17□□□□□ -2.38
BRCA2-203ENST00000528762 LEPROTL1O95214 131 aa0.17□□□□□ -2.38
BRCA2-203ENST00000528762 SPRR1BP22528 89 aa0.17□□□□□ -2.38
BRCA2-203ENST00000528762 SUPT6HQ7KZ85 1726 aaKnown RBP0.17□□□□□ -2.38
BRCA2-203ENST00000528762 V9GYS6 101 aa0.17□□□□□ -2.38
BRCA2-203ENST00000528762 BCORQ6W2J9 1755 aa0.17□□□□□ -2.38
BRCA2-203ENST00000528762 SAMD9Q5K651 1589 aa0.16□□□□□ -2.38
BRCA2-203ENST00000528762 DCHS2Q6V1P9 2916 aa0.16□□□□□ -2.38
BRCA2-203ENST00000528762 HMCN2Q8NDA2 5059 aa0.16□□□□□ -2.38
BRCA2-203ENST00000528762 D6R8Y8 96 aa0.16□□□□□ -2.38
BRCA2-203ENST00000528762 PYY3Q5JQD4 70 aa0.16□□□□□ -2.38
BRCA2-203ENST00000528762 ZNF720Q7Z2F6 126 aa0.16□□□□□ -2.38
BRCA2-203ENST00000528762 MUSTN1Q8IVN3 82 aa0.16□□□□□ -2.38
BRCA2-203ENST00000528762 C9orf62Q8N4C0 152 aa0.16□□□□□ -2.38
BRCA2-203ENST00000528762 MACF1Q9UPN3 7388 aaKnown RBP0.16□□□□□ -2.38
BRCA2-203ENST00000528762 WNK1Q9H4A3 2382 aa0.16□□□□□ -2.38
BRCA2-203ENST00000528762 ALMS1Q8TCU4 4167 aa0.15□□□□□ -2.38
BRCA2-203ENST00000528762 DEFB112Q30KQ8 113 aa0.15□□□□□ -2.39
BRCA2-203ENST00000528762 USMG5Q96IX5 58 aa0.15□□□□□ -2.39
BRCA2-203ENST00000528762 APLNQ9ULZ1 77 aa0.15□□□□□ -2.39
BRCA2-203ENST00000528762 TMEM131LA2VDJ0 1609 aa0.15□□□□□ -2.39
BRCA2-203ENST00000528762 ALKQ9UM73 1620 aa0.15□□□□□ -2.39
BRCA2-203ENST00000528762 QSER1Q2KHR3 1735 aa0.15□□□□□ -2.39
BRCA2-203ENST00000528762 ZNF831Q5JPB2 1677 aa0.14□□□□□ -2.39
BRCA2-203ENST00000528762 LTN1O94822 1766 aa0.14□□□□□ -2.39
BRCA2-203ENST00000528762 NEXMIFQ5QGS0 1516 aa0.14□□□□□ -2.39
BRCA2-203ENST00000528762 IGLC2P0DOY2 106 aa0.14□□□□□ -2.39
BRCA2-203ENST00000528762 IGLC3P0DOY3 106 aa0.14□□□□□ -2.39
BRCA2-203ENST00000528762 ALKAL2Q6UX46 152 aa0.14□□□□□ -2.39
BRCA2-203ENST00000528762 SETXQ7Z333 2677 aaKnown RBP0.14□□□□□ -2.39
BRCA2-203ENST00000528762 FLNCQ14315 2725 aa0.14□□□□□ -2.39
BRCA2-203ENST00000528762 ABCC3O15438 1527 aa0.13□□□□□ -2.39
BRCA2-203ENST00000528762 K7EP34 96 aa0.13□□□□□ -2.39
BRCA2-203ENST00000528762 COX8AP10176 69 aa0.13□□□□□ -2.39
BRCA2-203ENST00000528762 GNG2P59768 71 aa0.13□□□□□ -2.39
BRCA2-203ENST00000528762 PEA15Q15121 130 aa0.13□□□□□ -2.39
BRCA2-203ENST00000528762 DEFB105AQ8NG35 78 aa0.13□□□□□ -2.39
BRCA2-203ENST00000528762 UBE2D4Q9Y2X8 147 aa0.13□□□□□ -2.39
BRCA2-203ENST00000528762 CNOT1A5YKK6 2376 aaKnown RBP0.13□□□□□ -2.39
BRCA2-203ENST00000528762 KNL1Q8NG31 2342 aa0.13□□□□□ -2.39
BRCA2-203ENST00000528762 POLR1AO95602 1720 aaPredicted RBP0.13□□□□□ -2.39
BRCA2-203ENST00000528762 KIF14Q15058 1648 aa0.13□□□□□ -2.39
BRCA2-203ENST00000528762 PVALEFA0A1B0GWK0 134 aa0.12□□□□□ -2.39
BRCA2-203ENST00000528762 CPSF4LA6NMK7 179 aaKnown RBP0.12□□□□□ -2.39
BRCA2-203ENST00000528762 IQCF6A8MYZ5 107 aa0.12□□□□□ -2.39
BRCA2-203ENST00000528762 HMGN2P05204 90 aaKnown RBP0.12□□□□□ -2.39
BRCA2-203ENST00000528762 LELP1Q5T871 98 aa0.12□□□□□ -2.39
BRCA2-203ENST00000528762 S100A16Q96FQ6 103 aaKnown RBP0.12□□□□□ -2.39
BRCA2-203ENST00000528762 FLNAP21333 2647 aaKnown RBP0.12□□□□□ -2.39
BRCA2-203ENST00000528762 NSD1Q96L73 2696 aaPredicted RBP0.11□□□□□ -2.39
BRCA2-203ENST00000528762 DOT1LQ8TEK3 1739 aa0.11□□□□□ -2.39
BRCA2-203ENST00000528762 LOC730098B7Z3J9 87 aa0.11□□□□□ -2.39
BRCA2-203ENST00000528762 CYB5AP00167 134 aa0.11□□□□□ -2.39
BRCA2-203ENST00000528762 PRM1P04553 51 aa0.11□□□□□ -2.39
BRCA2-203ENST00000528762 TDRG1Q3Y452 100 aa0.11□□□□□ -2.39
BRCA2-203ENST00000528762 LRRC7Q96NW7 1537 aa0.11□□□□□ -2.39
BRCA2-203ENST00000528762 MED14O60244 1454 aa0.1□□□□□ -2.39
BRCA2-203ENST00000528762 NKTRP30414 1462 aaKnown RBP0.1□□□□□ -2.39
BRCA2-203ENST00000528762 PLIN4Q96Q06 1357 aa0.1□□□□□ -2.39
BRCA2-203ENST00000528762 I3L3M4 83 aa0.1□□□□□ -2.39
BRCA2-203ENST00000528762 H1FX-AS1Q4G0G2 97 aa0.1□□□□□ -2.39
BRCA2-203ENST00000528762 C4AP0C0L4 1744 aa0.1□□□□□ -2.39
BRCA2-203ENST00000528762 C4BP0C0L5 1744 aa0.1□□□□□ -2.39
BRCA2-203ENST00000528762 EP300Q09472 2414 aaPredicted RBP0.09□□□□□ -2.39
BRCA2-203ENST00000528762 HSPG2P98160 4391 aa0.09□□□□□ -2.39
BRCA2-203ENST00000528762 SPTY2D1-AS1A0A0U1RR47 76 aa0.09□□□□□ -2.4
BRCA2-203ENST00000528762 SMIM11AP58511 58 aa0.09□□□□□ -2.4
BRCA2-203ENST00000528762 NMSQ5H8A3 153 aa0.09□□□□□ -2.4
BRCA2-203ENST00000528762 HEPN1Q6WQI6 88 aa0.09□□□□□ -2.4
BRCA2-203ENST00000528762 SPRR2GQ9BYE4 73 aa0.09□□□□□ -2.4
BRCA2-203ENST00000528762 TIAM2Q8IVF5 1701 aa0.09□□□□□ -2.4
BRCA2-203ENST00000528762 MAP3K4Q9Y6R4 1608 aa0.09□□□□□ -2.4
BRCA2-203ENST00000528762 SCN11AQ9UI33 1791 aa0.09□□□□□ -2.4
BRCA2-203ENST00000528762 MRPL34Q9BQ48 92 aaKnown RBP0.08□□□□□ -2.4
BRCA2-203ENST00000528762 APC2O95996 2303 aa0.08□□□□□ -2.4
BRCA2-203ENST00000528762 RB1CC1Q8TDY2 1594 aa0.07□□□□□ -2.4
BRCA2-203ENST00000528762 DIP2BQ9P265 1576 aa0.07□□□□□ -2.4
BRCA2-203ENST00000528762 ARFGEF2Q9Y6D5 1785 aa0.07□□□□□ -2.4
BRCA2-203ENST00000528762 MYMXA0A1B0GTQ4 84 aa0.07□□□□□ -2.4
BRCA2-203ENST00000528762 A0A1B0GUT8 65 aa0.07□□□□□ -2.4
BRCA2-203ENST00000528762 SPINK4O60575 86 aa0.07□□□□□ -2.4
BRCA2-203ENST00000528762 PLGLAQ15195 96 aa0.07□□□□□ -2.4
BRCA2-203ENST00000528762 WFDC9Q8NEX5 89 aa0.07□□□□□ -2.4
BRCA2-203ENST00000528762 GAFA1Q96PS6 74 aa0.07□□□□□ -2.4
BRCA2-203ENST00000528762 TENM2Q9NT68 2774 aa0.07□□□□□ -2.4
BRCA2-203ENST00000528762 PREX1Q8TCU6 1659 aa0.07□□□□□ -2.4
BRCA2-203ENST00000528762 HECTD4Q9Y4D8 3996 aa0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms