RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 DSPP15924 2871 aaKnown RBP1.3□□□□□ -2.2
TRAPPC4-207ENST00000526141 COL4A6Q14031 1691 aa1.3□□□□□ -2.2
TRAPPC4-207ENST00000526141 A0A0G2JMZ2 1700 aa1.3□□□□□ -2.2
TRAPPC4-207ENST00000526141 PIEZO2Q9H5I5 2752 aa1.3□□□□□ -2.2
TRAPPC4-207ENST00000526141 TRBV30A0A0K0K1B3 111 aa1.3□□□□□ -2.2
TRAPPC4-207ENST00000526141 CTXND1A0A1B0GTU2 59 aa1.3□□□□□ -2.2
TRAPPC4-207ENST00000526141 NCR3O14931 201 aa1.3□□□□□ -2.2
TRAPPC4-207ENST00000526141 KRTAP12-1P59990 96 aa1.3□□□□□ -2.2
TRAPPC4-207ENST00000526141 LINC00575Q6W349 94 aa1.3□□□□□ -2.2
TRAPPC4-207ENST00000526141 SMCO4Q9NRQ5 59 aa1.3□□□□□ -2.2
TRAPPC4-207ENST00000526141 SPG11Q96JI7 2443 aa1.3□□□□□ -2.2
TRAPPC4-207ENST00000526141 POLQO75417 2590 aa1.3□□□□□ -2.2
TRAPPC4-207ENST00000526141 CR1P17927 2039 aa1.3□□□□□ -2.2
TRAPPC4-207ENST00000526141 NBPF19A0A087WUL8 3843 aa1.3□□□□□ -2.2
TRAPPC4-207ENST00000526141 FBN2P35556 2912 aa1.29□□□□□ -2.2
TRAPPC4-207ENST00000526141 CELSR3Q9NYQ7 3312 aa1.29□□□□□ -2.2
TRAPPC4-207ENST00000526141 TRGV1A0A0A0MS02 117 aa1.29□□□□□ -2.2
TRAPPC4-207ENST00000526141 SMIM31A0A1B0GVY4 71 aa1.29□□□□□ -2.2
TRAPPC4-207ENST00000526141 FAM223BA6NKX1 122 aa1.29□□□□□ -2.2
TRAPPC4-207ENST00000526141 KRTAP6-3Q3LI67 103 aa1.29□□□□□ -2.2
TRAPPC4-207ENST00000526141 BVES-AS1Q5T3Y7 98 aa1.29□□□□□ -2.2
TRAPPC4-207ENST00000526141 CFAP126Q5VTH2 177 aa1.29□□□□□ -2.2
TRAPPC4-207ENST00000526141 LINC00643Q86TS7 51 aa1.29□□□□□ -2.2
TRAPPC4-207ENST00000526141 CNOT1A5YKK6 2376 aaKnown RBP1.29□□□□□ -2.2
TRAPPC4-207ENST00000526141 NAV3Q8IVL0 2385 aa1.29□□□□□ -2.2
TRAPPC4-207ENST00000526141 DDX60LQ5H9U9 1706 aaKnown RBP1.29□□□□□ -2.2
TRAPPC4-207ENST00000526141 KALRNO60229 2985 aa1.29□□□□□ -2.2
TRAPPC4-207ENST00000526141 TNRC6AQ8NDV7 1962 aaKnown RBP1.28□□□□□ -2.2
TRAPPC4-207ENST00000526141 NINQ8N4C6 2090 aa1.28□□□□□ -2.2
TRAPPC4-207ENST00000526141 SPTA1P02549 2419 aa1.28□□□□□ -2.2
TRAPPC4-207ENST00000526141 EP300Q09472 2414 aaPredicted RBP1.28□□□□□ -2.2
TRAPPC4-207ENST00000526141 A0A1B0GWA3 101 aa1.28□□□□□ -2.2
TRAPPC4-207ENST00000526141 HMGN2P05204 90 aaKnown RBP1.28□□□□□ -2.2
TRAPPC4-207ENST00000526141 MGPP08493 103 aa1.28□□□□□ -2.2
TRAPPC4-207ENST00000526141 IGLC2P0DOY2 106 aa1.28□□□□□ -2.2
TRAPPC4-207ENST00000526141 IGLC3P0DOY3 106 aa1.28□□□□□ -2.2
TRAPPC4-207ENST00000526141 COX17Q14061 63 aa1.28□□□□□ -2.2
TRAPPC4-207ENST00000526141 SMIM4Q8WVI0 70 aa1.28□□□□□ -2.2
TRAPPC4-207ENST00000526141 SIP14410 1827 aa1.28□□□□□ -2.2
TRAPPC4-207ENST00000526141 PTPRFP10586 1907 aa1.28□□□□□ -2.2
TRAPPC4-207ENST00000526141 SNRNP200O75643 2136 aaKnown RBP1.28□□□□□ -2.2
TRAPPC4-207ENST00000526141 TLN1Q9Y490 2541 aaKnown RBP1.28□□□□□ -2.2
TRAPPC4-207ENST00000526141 SETD2Q9BYW2 2564 aaPredicted RBP1.28□□□□□ -2.2
TRAPPC4-207ENST00000526141 LAMA5O15230 3695 aa1.27□□□□□ -2.21
TRAPPC4-207ENST00000526141 FREM2Q5SZK8 3169 aa1.27□□□□□ -2.21
TRAPPC4-207ENST00000526141 NF1P21359 2839 aa1.27□□□□□ -2.21
TRAPPC4-207ENST00000526141 AKAP13Q12802 2813 aa1.27□□□□□ -2.21
TRAPPC4-207ENST00000526141 CEP192Q8TEP8 1941 aa1.27□□□□□ -2.21
TRAPPC4-207ENST00000526141 SCN7AQ01118 1682 aa1.27□□□□□ -2.21
TRAPPC4-207ENST00000526141 ZNF831Q5JPB2 1677 aa1.27□□□□□ -2.21
TRAPPC4-207ENST00000526141 A0A096LNT2 108 aa1.27□□□□□ -2.21
TRAPPC4-207ENST00000526141 TRAV1-2A0A0B4J238 106 aa1.27□□□□□ -2.21
TRAPPC4-207ENST00000526141 C7orf77A4D0Y5 90 aa1.27□□□□□ -2.21
TRAPPC4-207ENST00000526141 F8WEM9 126 aa1.27□□□□□ -2.21
TRAPPC4-207ENST00000526141 PDCD5O14737 125 aa1.27□□□□□ -2.21
TRAPPC4-207ENST00000526141 ZNF137PP52743 207 aa1.27□□□□□ -2.21
TRAPPC4-207ENST00000526141 SPINK13Q1W4C9 94 aa1.27□□□□□ -2.21
TRAPPC4-207ENST00000526141 DEFB119Q8N690 84 aa1.27□□□□□ -2.21
TRAPPC4-207ENST00000526141 PSENENQ9NZ42 101 aa1.27□□□□□ -2.21
TRAPPC4-207ENST00000526141 ABCA4P78363 2273 aa1.27□□□□□ -2.21
TRAPPC4-207ENST00000526141 TECTAO75443 2155 aa1.27□□□□□ -2.21
TRAPPC4-207ENST00000526141 TET1Q8NFU7 2136 aa1.27□□□□□ -2.21
TRAPPC4-207ENST00000526141 PLXNA1Q9UIW2 1896 aa1.26□□□□□ -2.21
TRAPPC4-207ENST00000526141 PHIPQ8WWQ0 1821 aa1.26□□□□□ -2.21
TRAPPC4-207ENST00000526141 PCLOQ9Y6V0 5065 aa1.26□□□□□ -2.21
TRAPPC4-207ENST00000526141 NFAT5O94916 1531 aa1.26□□□□□ -2.21
TRAPPC4-207ENST00000526141 LRRK2Q5S007 2527 aa1.26□□□□□ -2.21
TRAPPC4-207ENST00000526141 ANKARQ7Z5J8 1434 aa1.26□□□□□ -2.21
TRAPPC4-207ENST00000526141 H3BUT2 72 aa1.26□□□□□ -2.21
TRAPPC4-207ENST00000526141 ACYP2P14621 99 aa1.26□□□□□ -2.21
TRAPPC4-207ENST00000526141 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.26□□□□□ -2.21
TRAPPC4-207ENST00000526141 PRR15LQ9BU68 103 aa1.26□□□□□ -2.21
TRAPPC4-207ENST00000526141 LINC00846Q9NV44 126 aa1.26□□□□□ -2.21
TRAPPC4-207ENST00000526141 DDX60Q8IY21 1712 aaKnown RBP1.26□□□□□ -2.21
TRAPPC4-207ENST00000526141 ZFHX3Q15911 3703 aa1.26□□□□□ -2.21
TRAPPC4-207ENST00000526141 OTOGLQ3ZCN5 2332 aa1.26□□□□□ -2.21
TRAPPC4-207ENST00000526141 MYO18AQ92614 2054 aaKnown RBP1.25□□□□□ -2.21
TRAPPC4-207ENST00000526141 COL12A1Q99715 3063 aa1.25□□□□□ -2.21
TRAPPC4-207ENST00000526141 M0R3E3 92 aa1.25□□□□□ -2.21
TRAPPC4-207ENST00000526141 ARMS2P0C7Q2 107 aa1.25□□□□□ -2.21
TRAPPC4-207ENST00000526141 DEFA5Q01523 94 aa1.25□□□□□ -2.21
TRAPPC4-207ENST00000526141 C18orf32Q8TCD1 76 aa1.25□□□□□ -2.21
TRAPPC4-207ENST00000526141 SPRR4Q96PI1 79 aa1.25□□□□□ -2.21
TRAPPC4-207ENST00000526141 PRRC2BQ5JSZ5 2229 aaKnown RBP1.25□□□□□ -2.21
TRAPPC4-207ENST00000526141 PSME4Q14997 1843 aa1.24□□□□□ -2.21
TRAPPC4-207ENST00000526141 DMXL2Q8TDJ6 3036 aa1.24□□□□□ -2.21
TRAPPC4-207ENST00000526141 ZGRF1Q86YA3 2104 aa1.24□□□□□ -2.21
TRAPPC4-207ENST00000526141 LRRC37AA6NMS7 1700 aa1.24□□□□□ -2.21
TRAPPC4-207ENST00000526141 ABCA2Q9BZC7 2435 aa1.24□□□□□ -2.21
TRAPPC4-207ENST00000526141 COL4A1P02462 1669 aa1.24□□□□□ -2.21
TRAPPC4-207ENST00000526141 MYMXA0A1B0GTQ4 84 aa1.24□□□□□ -2.21
TRAPPC4-207ENST00000526141 IQCF6A8MYZ5 107 aa1.24□□□□□ -2.21
TRAPPC4-207ENST00000526141 D6R8Y8 96 aa1.24□□□□□ -2.21
TRAPPC4-207ENST00000526141 LEPROTL1O95214 131 aa1.24□□□□□ -2.21
TRAPPC4-207ENST00000526141 CFDP00746 253 aaPredicted RBP1.24□□□□□ -2.21
TRAPPC4-207ENST00000526141 MUSTN1Q8IVN3 82 aa1.24□□□□□ -2.21
TRAPPC4-207ENST00000526141 PLAC4Q8WY50 150 aa1.24□□□□□ -2.21
TRAPPC4-207ENST00000526141 ATRQ13535 2644 aa1.24□□□□□ -2.21
TRAPPC4-207ENST00000526141 PATJQ8NI35 1801 aa1.24□□□□□ -2.21
TRAPPC4-207ENST00000526141 UTP20O75691 2785 aaKnown RBP1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms