RNA–Protein interactions for RNA: ENST00000525504.5

CCDC90B-204, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-204ENST00000525504 CKS1BP61024 79 aa3.57□□□□□ -1.84
CCDC90B-204ENST00000525504 KIAA1644Q3SXP7 199 aa3.57□□□□□ -1.84
CCDC90B-204ENST00000525504 COX19Q49B96 90 aa3.57□□□□□ -1.84
CCDC90B-204ENST00000525504 C10orf91Q5T1B1 145 aa3.57□□□□□ -1.84
CCDC90B-204ENST00000525504 FAM19A5Q7Z5A7 132 aaPredicted RBP3.57□□□□□ -1.84
CCDC90B-204ENST00000525504 SCGB3A1Q96QR1 104 aa3.57□□□□□ -1.84
CCDC90B-204ENST00000525504 SEC11CQ9BY50 192 aa3.57□□□□□ -1.84
CCDC90B-204ENST00000525504 TP73-AS1Q9UF72 201 aa3.57□□□□□ -1.84
CCDC90B-204ENST00000525504 C22orf24Q9Y442 160 aa3.57□□□□□ -1.84
CCDC90B-204ENST00000525504 SMIM1B2RUZ4 78 aa3.56□□□□□ -1.84
CCDC90B-204ENST00000525504 M0QXV9 152 aa3.56□□□□□ -1.84
CCDC90B-204ENST00000525504 ZNF861PO60384 105 aa3.56□□□□□ -1.84
CCDC90B-204ENST00000525504 PRSS2P07478 247 aa3.56□□□□□ -1.84
CCDC90B-204ENST00000525504 CXCL5P42830 114 aa3.56□□□□□ -1.84
CCDC90B-204ENST00000525504 PDZD11Q5EBL8 140 aa3.56□□□□□ -1.84
CCDC90B-204ENST00000525504 PRR26Q8N8Z3 221 aa3.56□□□□□ -1.84
CCDC90B-204ENST00000525504 CARHSP1Q9Y2V2 147 aaKnown RBP3.56□□□□□ -1.84
CCDC90B-204ENST00000525504 IGLV5-39A0A0G2JS06 123 aa3.55□□□□□ -1.84
CCDC90B-204ENST00000525504 PMVKQ15126 192 aa3.55□□□□□ -1.84
CCDC90B-204ENST00000525504 XAGE1AQ9HD64 81 aa3.55□□□□□ -1.84
CCDC90B-204ENST00000525504 TOMM7Q9P0U1 55 aa3.55□□□□□ -1.84
CCDC90B-204ENST00000525504 LPAP08519 4548 aa3.55□□□□□ -1.84
CCDC90B-204ENST00000525504 MUC2Q02817 5179 aa3.55□□□□□ -1.84
CCDC90B-204ENST00000525504 IGLV5-37A0A075B6J1 123 aa3.54□□□□□ -1.84
CCDC90B-204ENST00000525504 NUPR1O60356 82 aa3.54□□□□□ -1.84
CCDC90B-204ENST00000525504 S100PP25815 95 aa3.54□□□□□ -1.84
CCDC90B-204ENST00000525504 UBE2BP63146 152 aa3.54□□□□□ -1.84
CCDC90B-204ENST00000525504 A0A096LNJ9 63 aa3.53□□□□□ -1.84
CCDC90B-204ENST00000525504 BCE1O60756 84 aa3.53□□□□□ -1.84
CCDC90B-204ENST00000525504 IGLC3P0DOY3 106 aa3.53□□□□□ -1.84
CCDC90B-204ENST00000525504 RPL13AP40429 203 aaKnown RBP3.53□□□□□ -1.84
CCDC90B-204ENST00000525504 FABP9Q0Z7S8 132 aa3.53□□□□□ -1.84
CCDC90B-204ENST00000525504 RHEBQ15382 184 aa3.53□□□□□ -1.84
CCDC90B-204ENST00000525504 FA2HQ7L5A8 372 aa3.53□□□□□ -1.84
CCDC90B-204ENST00000525504 MRPL55Q7Z7F7 128 aaKnown RBP3.53□□□□□ -1.84
CCDC90B-204ENST00000525504 KRTAP13-1Q8IUC0 172 aa3.53□□□□□ -1.84
CCDC90B-204ENST00000525504 COX7B2Q8TF08 81 aa3.53□□□□□ -1.84
CCDC90B-204ENST00000525504 URB1-AS1Q96HZ7 61 aa3.53□□□□□ -1.84
CCDC90B-204ENST00000525504 LINC00167Q96N53 147 aa3.53□□□□□ -1.84
CCDC90B-204ENST00000525504 H3BRM9 83 aa3.52□□□□□ -1.85
CCDC90B-204ENST00000525504 LINC00614P0C842 121 aa3.52□□□□□ -1.85
CCDC90B-204ENST00000525504 COMMD7Q86VX2 200 aa3.52□□□□□ -1.85
CCDC90B-204ENST00000525504 ATP5LO75964 103 aa3.51□□□□□ -1.85
CCDC90B-204ENST00000525504 IGKV2-30P06310 120 aa3.51□□□□□ -1.85
CCDC90B-204ENST00000525504 SPINK8P0C7L1 97 aa3.51□□□□□ -1.85
CCDC90B-204ENST00000525504 RPL28P46779 137 aaKnown RBP3.51□□□□□ -1.85
CCDC90B-204ENST00000525504 C18orf32Q8TCD1 76 aa3.51□□□□□ -1.85
CCDC90B-204ENST00000525504 RPS10P5Q9NQ39 176 aa3.51□□□□□ -1.85
CCDC90B-204ENST00000525504 ZNF22P17026 224 aaPredicted RBP3.5□□□□□ -1.85
CCDC90B-204ENST00000525504 COX17Q14061 63 aa3.5□□□□□ -1.85
CCDC90B-204ENST00000525504 VAMP3Q15836 100 aa3.5□□□□□ -1.85
CCDC90B-204ENST00000525504 Q75L30 129 aa3.5□□□□□ -1.85
CCDC90B-204ENST00000525504 YPEL4Q96NS1 127 aa3.5□□□□□ -1.85
CCDC90B-204ENST00000525504 SMCO4Q9NRQ5 59 aa3.5□□□□□ -1.85
CCDC90B-204ENST00000525504 TRAPPC1Q9Y5R8 145 aa3.5□□□□□ -1.85
CCDC90B-204ENST00000525504 A0A087X002 238 aa3.49□□□□□ -1.85
CCDC90B-204ENST00000525504 RPL37AP8A6NKH3 93 aa3.49□□□□□ -1.85
CCDC90B-204ENST00000525504 HBDP02042 147 aa3.49□□□□□ -1.85
CCDC90B-204ENST00000525504 CRYGAP11844 174 aa3.49□□□□□ -1.85
CCDC90B-204ENST00000525504 RAB5BP61020 215 aa3.49□□□□□ -1.85
CCDC90B-204ENST00000525504 FAM229BQ4G0N7 80 aa3.49□□□□□ -1.85
CCDC90B-204ENST00000525504 SFTA2Q6UW10 78 aa3.49□□□□□ -1.85
CCDC90B-204ENST00000525504 ZNF625Q96I27 306 aaPredicted RBP3.49□□□□□ -1.85
CCDC90B-204ENST00000525504 SND1-IT1Q9HBX3 110 aa3.49□□□□□ -1.85
CCDC90B-204ENST00000525504 ERG28Q9UKR5 140 aa3.49□□□□□ -1.85
CCDC90B-204ENST00000525504 C11orf86A6NJI1 115 aa3.48□□□□□ -1.85
CCDC90B-204ENST00000525504 BAGE3Q86Y29 109 aa3.48□□□□□ -1.85
CCDC90B-204ENST00000525504 SVBPQ8N300 66 aa3.48□□□□□ -1.85
CCDC90B-204ENST00000525504 OBSCNQ5VST9 7968 aa3.48□□□□□ -1.85
CCDC90B-204ENST00000525504 TRAV12-1A0A0B4J245 112 aa3.47□□□□□ -1.85
CCDC90B-204ENST00000525504 M0R378 163 aa3.47□□□□□ -1.85
CCDC90B-204ENST00000525504 SNAPINO95295 136 aa3.47□□□□□ -1.85
CCDC90B-204ENST00000525504 APOC3P02656 99 aa3.47□□□□□ -1.85
CCDC90B-204ENST00000525504 PFN2P35080 140 aa3.47□□□□□ -1.85
CCDC90B-204ENST00000525504 NDUFA6P56556 154 aa3.47□□□□□ -1.85
CCDC90B-204ENST00000525504 RPL24P83731 157 aaKnown RBP3.47□□□□□ -1.85
CCDC90B-204ENST00000525504 PMCHL1Q16048 86 aa3.47□□□□□ -1.85
CCDC90B-204ENST00000525504 KRTAP13-2Q52LG2 175 aa3.47□□□□□ -1.85
CCDC90B-204ENST00000525504 NKAPP1Q8N9T2 125 aa3.47□□□□□ -1.85
CCDC90B-204ENST00000525504 Q8NDZ9 215 aa3.47□□□□□ -1.85
CCDC90B-204ENST00000525504 MPLKIPQ8TAP9 179 aa3.47□□□□□ -1.85
CCDC90B-204ENST00000525504 CHCHD1Q96BP2 118 aaKnown RBP3.47□□□□□ -1.85
CCDC90B-204ENST00000525504 ANAPC11Q9NYG5 84 aa3.47□□□□□ -1.85
CCDC90B-204ENST00000525504 TMEM223A0PJW6 202 aa3.46□□□□□ -1.86
CCDC90B-204ENST00000525504 KRTAP9-6A8MVA2 160 aa3.46□□□□□ -1.86
CCDC90B-204ENST00000525504 SCO1O75880 301 aa3.46□□□□□ -1.86
CCDC90B-204ENST00000525504 UBE2AP49459 152 aa3.46□□□□□ -1.86
CCDC90B-204ENST00000525504 KRTAP10-5P60370 271 aa3.46□□□□□ -1.86
CCDC90B-204ENST00000525504 PRR4Q16378 134 aa3.46□□□□□ -1.86
CCDC90B-204ENST00000525504 TMEM170BQ5T4T1 132 aa3.46□□□□□ -1.86
CCDC90B-204ENST00000525504 TYMSOSQ8TAI1 123 aa3.46□□□□□ -1.86
CCDC90B-204ENST00000525504 PLEKHB2Q96CS7 222 aa3.46□□□□□ -1.86
CCDC90B-204ENST00000525504 TMEM126AQ9H061 195 aa3.46□□□□□ -1.86
CCDC90B-204ENST00000525504 MUC17Q685J3 4493 aa3.45□□□□□ -1.86
CCDC90B-204ENST00000525504 IGKV2-28A0A075B6P5 120 aa3.45□□□□□ -1.86
CCDC90B-204ENST00000525504 TMEM238C9JI98 176 aa3.45□□□□□ -1.86
CCDC90B-204ENST00000525504 TSPAN13O95857 204 aa3.45□□□□□ -1.86
CCDC90B-204ENST00000525504 IGKV2D-28P01615 120 aa3.45□□□□□ -1.86
CCDC90B-204ENST00000525504 NDUFA5Q16718 116 aa3.45□□□□□ -1.86
CCDC90B-204ENST00000525504 IFI27L1Q96BM0 104 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms