RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 C5orf56Q8N8D9 126 aa0.92□□□□□ -2.26
PCM1-219ENST00000523540 FBN2P35556 2912 aa0.92□□□□□ -2.26
PCM1-219ENST00000523540 ADCY10Q96PN6 1610 aa0.92□□□□□ -2.26
PCM1-219ENST00000523540 ZMYM4Q5VZL5 1548 aa0.91□□□□□ -2.26
PCM1-219ENST00000523540 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.91□□□□□ -2.26
PCM1-219ENST00000523540 LOC110117498A0A087WWA1 95 aa0.91□□□□□ -2.26
PCM1-219ENST00000523540 TRAV1-2A0A0B4J238 106 aa0.91□□□□□ -2.26
PCM1-219ENST00000523540 H0Y9P7 68 aa0.91□□□□□ -2.26
PCM1-219ENST00000523540 ZNF137PP52743 207 aa0.91□□□□□ -2.26
PCM1-219ENST00000523540 DEFB107AQ8IZN7 70 aa0.91□□□□□ -2.26
PCM1-219ENST00000523540 WFDC6Q9BQY6 131 aa0.91□□□□□ -2.26
PCM1-219ENST00000523540 LINC00846Q9NV44 126 aa0.91□□□□□ -2.26
PCM1-219ENST00000523540 LRRC37A2A6NM11 1700 aa0.91□□□□□ -2.26
PCM1-219ENST00000523540 ALPK2Q86TB3 2170 aa0.91□□□□□ -2.26
PCM1-219ENST00000523540 NCOA6Q14686 2063 aaPredicted RBP0.9□□□□□ -2.26
PCM1-219ENST00000523540 TRPM2O94759 1503 aa0.9□□□□□ -2.26
PCM1-219ENST00000523540 EFCAB6Q5THR3 1501 aa0.9□□□□□ -2.26
PCM1-219ENST00000523540 QSER1Q2KHR3 1735 aa0.9□□□□□ -2.27
PCM1-219ENST00000523540 NOTCH1P46531 2555 aa0.9□□□□□ -2.27
PCM1-219ENST00000523540 LINC01549A6NIU2 74 aa0.9□□□□□ -2.27
PCM1-219ENST00000523540 M0R2N4 97 aa0.9□□□□□ -2.27
PCM1-219ENST00000523540 INE1O15225 51 aa0.9□□□□□ -2.27
PCM1-219ENST00000523540 NDUFB1O75438 58 aa0.9□□□□□ -2.27
PCM1-219ENST00000523540 IFI6P09912 130 aa0.9□□□□□ -2.27
PCM1-219ENST00000523540 HMGA1P17096 107 aaKnown RBP0.9□□□□□ -2.27
PCM1-219ENST00000523540 FXYD4P59646 89 aa0.9□□□□□ -2.27
PCM1-219ENST00000523540 SMIM4Q8WVI0 70 aa0.9□□□□□ -2.27
PCM1-219ENST00000523540 LINC00208Q96KT6 92 aa0.9□□□□□ -2.27
PCM1-219ENST00000523540 SPRR4Q96PI1 79 aa0.9□□□□□ -2.27
PCM1-219ENST00000523540 PLAC8Q9NZF1 115 aa0.9□□□□□ -2.27
PCM1-219ENST00000523540 NWD1Q149M9 1564 aa0.9□□□□□ -2.27
PCM1-219ENST00000523540 PIEZO2Q9H5I5 2752 aa0.9□□□□□ -2.27
PCM1-219ENST00000523540 E9PCH4 1651 aa0.89□□□□□ -2.27
PCM1-219ENST00000523540 ABCC8Q09428 1581 aa0.89□□□□□ -2.27
PCM1-219ENST00000523540 TRGV1A0A0A0MS02 117 aa0.89□□□□□ -2.27
PCM1-219ENST00000523540 ACYP2P14621 99 aa0.89□□□□□ -2.27
PCM1-219ENST00000523540 SPINK7P58062 85 aa0.89□□□□□ -2.27
PCM1-219ENST00000523540 NREPQ16612 68 aa0.89□□□□□ -2.27
PCM1-219ENST00000523540 GDF5OSQ5U4N7 250 aa0.89□□□□□ -2.27
PCM1-219ENST00000523540 C10orf113Q5VZT2 155 aa0.89□□□□□ -2.27
PCM1-219ENST00000523540 WFDC9Q8NEX5 89 aa0.89□□□□□ -2.27
PCM1-219ENST00000523540 TMEM263Q8WUH6 116 aaKnown RBP0.89□□□□□ -2.27
PCM1-219ENST00000523540 Q96NJ1 140 aa0.89□□□□□ -2.27
PCM1-219ENST00000523540 MED13LQ71F56 2210 aa0.89□□□□□ -2.27
PCM1-219ENST00000523540 TOGARAM1Q9Y4F4 1720 aa0.89□□□□□ -2.27
PCM1-219ENST00000523540 AGLP35573 1532 aa0.89□□□□□ -2.27
PCM1-219ENST00000523540 TRAV21A0A0B4J279 112 aa0.88□□□□□ -2.27
PCM1-219ENST00000523540 TRBV30A0A0K0K1B3 111 aa0.88□□□□□ -2.27
PCM1-219ENST00000523540 CAV3P56539 151 aa0.88□□□□□ -2.27
PCM1-219ENST00000523540 NCBP2-AS2Q69YL0 99 aa0.88□□□□□ -2.27
PCM1-219ENST00000523540 SPATA8Q6RVD6 105 aa0.88□□□□□ -2.27
PCM1-219ENST00000523540 Q6ZQY7 126 aa0.88□□□□□ -2.27
PCM1-219ENST00000523540 TOMM5Q8N4H5 51 aa0.88□□□□□ -2.27
PCM1-219ENST00000523540 A0A0G2JMZ2 1700 aa0.88□□□□□ -2.27
PCM1-219ENST00000523540 SLIT1O75093 1534 aa0.88□□□□□ -2.27
PCM1-219ENST00000523540 CACNA1CQ13936 2221 aa0.88□□□□□ -2.27
PCM1-219ENST00000523540 DDX60Q8IY21 1712 aaKnown RBP0.87□□□□□ -2.27
PCM1-219ENST00000523540 TRBV6-1A0A0K0K1D8 114 aa0.87□□□□□ -2.27
PCM1-219ENST00000523540 LCE6AA0A183 80 aa0.87□□□□□ -2.27
PCM1-219ENST00000523540 PRH1P02810 166 aa0.87□□□□□ -2.27
PCM1-219ENST00000523540 FCER1GP30273 86 aa0.87□□□□□ -2.27
PCM1-219ENST00000523540 GAFA1Q96PS6 74 aa0.87□□□□□ -2.27
PCM1-219ENST00000523540 CCL19Q99731 98 aa0.87□□□□□ -2.27
PCM1-219ENST00000523540 LINC00472Q9H8W2 130 aa0.87□□□□□ -2.27
PCM1-219ENST00000523540 NFAT5O94916 1531 aa0.87□□□□□ -2.27
PCM1-219ENST00000523540 PLXNB2O15031 1838 aa0.87□□□□□ -2.27
PCM1-219ENST00000523540 LRRC37AA6NMS7 1700 aa0.86□□□□□ -2.27
PCM1-219ENST00000523540 IQGAP1P46940 1657 aa0.86□□□□□ -2.27
PCM1-219ENST00000523540 DEFB112Q30KQ8 113 aa0.86□□□□□ -2.27
PCM1-219ENST00000523540 ENHOQ6UWT2 76 aa0.86□□□□□ -2.27
PCM1-219ENST00000523540 UBL5Q9BZL1 73 aa0.86□□□□□ -2.27
PCM1-219ENST00000523540 NMES1Q9C002 83 aa0.86□□□□□ -2.27
PCM1-219ENST00000523540 CMC2Q9NRP2 79 aa0.86□□□□□ -2.27
PCM1-219ENST00000523540 F5P12259 2224 aa0.86□□□□□ -2.27
PCM1-219ENST00000523540 ABCA1O95477 2261 aa0.86□□□□□ -2.27
PCM1-219ENST00000523540 A0A1B0GU69 56 aa0.85□□□□□ -2.27
PCM1-219ENST00000523540 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.85□□□□□ -2.27
PCM1-219ENST00000523540 OBSCN-AS1Q96MR7 158 aa0.85□□□□□ -2.27
PCM1-219ENST00000523540 SSC5DA1L4H1 1573 aa0.84□□□□□ -2.27
PCM1-219ENST00000523540 MROH2BQ7Z745 1585 aa0.84□□□□□ -2.27
PCM1-219ENST00000523540 LINC00959A0A1B0GUT2 108 aa0.84□□□□□ -2.27
PCM1-219ENST00000523540 K7EMI3 77 aa0.84□□□□□ -2.27
PCM1-219ENST00000523540 NDUFA4O00483 81 aa0.84□□□□□ -2.27
PCM1-219ENST00000523540 NCR3O14931 201 aa0.84□□□□□ -2.27
PCM1-219ENST00000523540 PLNP26678 52 aa0.84□□□□□ -2.27
PCM1-219ENST00000523540 C10orf99Q6UWK7 81 aa0.84□□□□□ -2.27
PCM1-219ENST00000523540 SMIM11BQ8TCY0 68 aa0.84□□□□□ -2.27
PCM1-219ENST00000523540 ABRACLQ9P1F3 81 aa0.84□□□□□ -2.27
PCM1-219ENST00000523540 KIF21BO75037 1637 aa0.84□□□□□ -2.28
PCM1-219ENST00000523540 DEPDC5O75140 1603 aa0.84□□□□□ -2.28
PCM1-219ENST00000523540 BPTFQ12830 3046 aa0.84□□□□□ -2.28
PCM1-219ENST00000523540 TULP4Q9NRJ4 1543 aa0.84□□□□□ -2.28
PCM1-219ENST00000523540 C4AP0C0L4 1744 aa0.84□□□□□ -2.28
PCM1-219ENST00000523540 CADP27708 2225 aa0.83□□□□□ -2.28
PCM1-219ENST00000523540 GVQW2A0A096LPI5 108 aaPredicted RBP0.83□□□□□ -2.28
PCM1-219ENST00000523540 G3V318 75 aa0.83□□□□□ -2.28
PCM1-219ENST00000523540 COX7BP24311 80 aa0.83□□□□□ -2.28
PCM1-219ENST00000523540 RPL38P63173 70 aaKnown RBP0.83□□□□□ -2.28
PCM1-219ENST00000523540 HAMPP81172 84 aa0.83□□□□□ -2.28
PCM1-219ENST00000523540 Q6ZRX8 168 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms