RNA–Protein interactions for RNA: ENST00000522139.1

CNOT8-220, Transcript of CCR4-NOT transcription complex subunit 8, humanhuman

TSL 3

Gene CNOT8, Length 566 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT8-220ENST00000522139 CLEC2BQ92478 149 aa3.22□□□□□ -1.89
CNOT8-220ENST00000522139 TMEM243Q9BU79 118 aa3.22□□□□□ -1.89
CNOT8-220ENST00000522139 FLNCQ14315 2725 aa3.22□□□□□ -1.89
CNOT8-220ENST00000522139 USP9XQ93008 2570 aaPredicted RBP3.22□□□□□ -1.89
CNOT8-220ENST00000522139 AKAP9Q99996 3911 aa3.22□□□□□ -1.89
CNOT8-220ENST00000522139 CELSR2Q9HCU4 2923 aa3.21□□□□□ -1.9
CNOT8-220ENST00000522139 SPG11Q96JI7 2443 aa3.21□□□□□ -1.9
CNOT8-220ENST00000522139 VPS13CQ709C8 3753 aa3.21□□□□□ -1.9
CNOT8-220ENST00000522139 RELNP78509 3460 aa3.21□□□□□ -1.9
CNOT8-220ENST00000522139 IGKV2-28A0A075B6P5 120 aa3.21□□□□□ -1.9
CNOT8-220ENST00000522139 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.21□□□□□ -1.9
CNOT8-220ENST00000522139 FAM236AA0A1B0GUQ0 79 aa3.21□□□□□ -1.9
CNOT8-220ENST00000522139 FAM236BA0A1B0GV22 79 aa3.21□□□□□ -1.9
CNOT8-220ENST00000522139 IGKV2-29A2NJV5 120 aaPredicted RBP3.21□□□□□ -1.9
CNOT8-220ENST00000522139 H7C2G1 150 aa3.21□□□□□ -1.9
CNOT8-220ENST00000522139 TMEM256-PLSCR3K7ERE1 68 aa3.21□□□□□ -1.9
CNOT8-220ENST00000522139 IGKV2D-28P01615 120 aa3.21□□□□□ -1.9
CNOT8-220ENST00000522139 RPL18AQ02543 176 aaKnown RBP3.21□□□□□ -1.9
CNOT8-220ENST00000522139 SERP2Q8N6R1 65 aa3.21□□□□□ -1.9
CNOT8-220ENST00000522139 SMCR5Q8TEV8 140 aa3.21□□□□□ -1.9
CNOT8-220ENST00000522139 C16orf95Q9H693 158 aa3.21□□□□□ -1.9
CNOT8-220ENST00000522139 ZFHX3Q15911 3703 aa3.21□□□□□ -1.9
CNOT8-220ENST00000522139 SPTBN4Q9H254 2564 aa3.2□□□□□ -1.9
CNOT8-220ENST00000522139 ANKRD17O75179 2603 aaKnown RBP3.2□□□□□ -1.9
CNOT8-220ENST00000522139 IGKV3-7A0A075B6H7 116 aa3.2□□□□□ -1.9
CNOT8-220ENST00000522139 LOC110117498A0A087WWA1 95 aa3.2□□□□□ -1.9
CNOT8-220ENST00000522139 TRBV6-8A0A0A6YYG3 113 aa3.2□□□□□ -1.9
CNOT8-220ENST00000522139 TRBV7-6A0A0J9YX20 115 aa3.2□□□□□ -1.9
CNOT8-220ENST00000522139 A0A1B0GW54 56 aa3.2□□□□□ -1.9
CNOT8-220ENST00000522139 SMIM9A6NGZ8 99 aa3.2□□□□□ -1.9
CNOT8-220ENST00000522139 DNAL4O96015 105 aa3.2□□□□□ -1.9
CNOT8-220ENST00000522139 CCKP06307 115 aa3.2□□□□□ -1.9
CNOT8-220ENST00000522139 TLX1NBP0CAT3 122 aa3.2□□□□□ -1.9
CNOT8-220ENST00000522139 CCL18P55774 89 aa3.2□□□□□ -1.9
CNOT8-220ENST00000522139 CEMP1Q6PRD7 247 aaPredicted RBP3.2□□□□□ -1.9
CNOT8-220ENST00000522139 LINC00337Q8N6G1 96 aa3.2□□□□□ -1.9
CNOT8-220ENST00000522139 UPK3BQ9BT76 320 aa3.2□□□□□ -1.9
CNOT8-220ENST00000522139 SND1-IT1Q9HBX3 110 aa3.2□□□□□ -1.9
CNOT8-220ENST00000522139 SS18L2Q9UHA2 77 aa3.2□□□□□ -1.9
CNOT8-220ENST00000522139 NCOR2Q9Y618 2525 aa3.2□□□□□ -1.9
CNOT8-220ENST00000522139 PKD1L2Q7Z442 2459 aa3.19□□□□□ -1.9
CNOT8-220ENST00000522139 IGHV3-64A0A075B6Q5 118 aa3.19□□□□□ -1.9
CNOT8-220ENST00000522139 LOC107984640A0A0U1RRK4 108 aa3.19□□□□□ -1.9
CNOT8-220ENST00000522139 hADV29S1A0JD25 119 aa3.19□□□□□ -1.9
CNOT8-220ENST00000522139 KNCNA6PVL3 124 aa3.19□□□□□ -1.9
CNOT8-220ENST00000522139 LYRM9A8MSI8 78 aa3.19□□□□□ -1.9
CNOT8-220ENST00000522139 J3KT08 172 aa3.19□□□□□ -1.9
CNOT8-220ENST00000522139 IGLV1-51P01701 117 aa3.19□□□□□ -1.9
CNOT8-220ENST00000522139 DEFB116Q30KQ4 102 aa3.19□□□□□ -1.9
CNOT8-220ENST00000522139 MIR7-3HGQ8N6C7 128 aa3.19□□□□□ -1.9
CNOT8-220ENST00000522139 C15orf56Q8N910 161 aa3.19□□□□□ -1.9
CNOT8-220ENST00000522139 SMIM11BQ8TCY0 68 aa3.19□□□□□ -1.9
CNOT8-220ENST00000522139 KLK12Q9UKR0 248 aa3.19□□□□□ -1.9
CNOT8-220ENST00000522139 ACACBO00763 2458 aa3.19□□□□□ -1.9
CNOT8-220ENST00000522139 UBR5O95071 2799 aaPredicted RBP3.19□□□□□ -1.9
CNOT8-220ENST00000522139 CR1P17927 2039 aa3.19□□□□□ -1.9
CNOT8-220ENST00000522139 MYO18BQ8IUG5 2567 aa3.18□□□□□ -1.9
CNOT8-220ENST00000522139 GVQW2A0A096LPI5 108 aaPredicted RBP3.18□□□□□ -1.9
CNOT8-220ENST00000522139 UBE2L6O14933 153 aa3.18□□□□□ -1.9
CNOT8-220ENST00000522139 SS18Q15532 418 aa3.18□□□□□ -1.9
CNOT8-220ENST00000522139 C9orf153Q5TBE3 101 aa3.18□□□□□ -1.9
CNOT8-220ENST00000522139 DYNLRB2Q8TF09 96 aa3.18□□□□□ -1.9
CNOT8-220ENST00000522139 ORMDL1Q9P0S3 153 aa3.18□□□□□ -1.9
CNOT8-220ENST00000522139 TEX15Q9BXT5 2789 aa3.17□□□□□ -1.9
CNOT8-220ENST00000522139 CHD8Q9HCK8 2581 aa3.17□□□□□ -1.9
CNOT8-220ENST00000522139 ZANQ9Y493 2812 aa3.17□□□□□ -1.9
CNOT8-220ENST00000522139 CHD6Q8TD26 2715 aa3.17□□□□□ -1.9
CNOT8-220ENST00000522139 COL12A1Q99715 3063 aa3.17□□□□□ -1.9
CNOT8-220ENST00000522139 PIEZO1Q92508 2521 aa3.17□□□□□ -1.9
CNOT8-220ENST00000522139 TRGV1A0A0A0MS02 117 aa3.17□□□□□ -1.9
CNOT8-220ENST00000522139 LINC00959A0A1B0GUT2 108 aa3.17□□□□□ -1.9
CNOT8-220ENST00000522139 ERC2-IT1O76042 136 aa3.17□□□□□ -1.9
CNOT8-220ENST00000522139 C10orf99Q6UWK7 81 aa3.17□□□□□ -1.9
CNOT8-220ENST00000522139 Q8N814 137 aa3.17□□□□□ -1.9
CNOT8-220ENST00000522139 CRYBG3Q68DQ2 2970 aa3.17□□□□□ -1.9
CNOT8-220ENST00000522139 IGSF10Q6WRI0 2623 aa3.17□□□□□ -1.9
CNOT8-220ENST00000522139 UTP20O75691 2785 aaKnown RBP3.17□□□□□ -1.9
CNOT8-220ENST00000522139 MAP1AP78559 2803 aaPredicted RBP3.16□□□□□ -1.9
CNOT8-220ENST00000522139 IGHV3-73A0A0B4J1V6 119 aa3.16□□□□□ -1.9
CNOT8-220ENST00000522139 TRAV13-1A0A0B4J241 112 aa3.16□□□□□ -1.9
CNOT8-220ENST00000522139 A0A1B0GVX0 72 aa3.16□□□□□ -1.9
CNOT8-220ENST00000522139 NDUFC1O43677 76 aa3.16□□□□□ -1.9
CNOT8-220ENST00000522139 KLKP1Q107X0 134 aa3.16□□□□□ -1.9
CNOT8-220ENST00000522139 C5orf47Q569G3 176 aa3.16□□□□□ -1.9
CNOT8-220ENST00000522139 RNASE13Q5GAN3 156 aaKnown RBP3.16□□□□□ -1.9
CNOT8-220ENST00000522139 Q6ZTI0 123 aa3.16□□□□□ -1.9
CNOT8-220ENST00000522139 LINC00846Q9NV44 126 aa3.16□□□□□ -1.9
CNOT8-220ENST00000522139 PTPN13Q12923 2485 aa3.16□□□□□ -1.9
CNOT8-220ENST00000522139 NAV2Q8IVL1 2488 aa3.16□□□□□ -1.9
CNOT8-220ENST00000522139 TLN2Q9Y4G6 2542 aa3.16□□□□□ -1.9
CNOT8-220ENST00000522139 IGLV6-57P01721 117 aa3.15□□□□□ -1.91
CNOT8-220ENST00000522139 ATP5EP56381 51 aaPredicted RBP3.15□□□□□ -1.91
CNOT8-220ENST00000522139 DEFB113Q30KQ7 82 aa3.15□□□□□ -1.91
CNOT8-220ENST00000522139 OR13C6PQ8NH95 151 aa3.15□□□□□ -1.91
CNOT8-220ENST00000522139 DPH3Q96FX2 82 aa3.15□□□□□ -1.91
CNOT8-220ENST00000522139 PRO0255Q9UI72 69 aa3.15□□□□□ -1.91
CNOT8-220ENST00000522139 C2CD3Q4AC94 2353 aa3.15□□□□□ -1.91
CNOT8-220ENST00000522139 LRRK2Q5S007 2527 aa3.15□□□□□ -1.91
CNOT8-220ENST00000522139 SETXQ7Z333 2677 aaKnown RBP3.15□□□□□ -1.91
CNOT8-220ENST00000522139 TRAV7A0A075B6U4 112 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 1862 ms