RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 SPART-AS1P0CW21 52 aa3.18□□□□□ -1.9
CTNNA1-212ENST00000518919 HTN3P15516 51 aa3.18□□□□□ -1.9
CTNNA1-212ENST00000518919 NPC2P61916 151 aa3.18□□□□□ -1.9
CTNNA1-212ENST00000518919 OCIAD2Q56VL3 154 aa3.18□□□□□ -1.9
CTNNA1-212ENST00000518919 SFTA2Q6UW10 78 aa3.18□□□□□ -1.9
CTNNA1-212ENST00000518919 CLPSL2Q6UWE3 100 aa3.18□□□□□ -1.9
CTNNA1-212ENST00000518919 COX7B2Q8TF08 81 aa3.18□□□□□ -1.9
CTNNA1-212ENST00000518919 C11orf68Q9H3H3 251 aaKnown RBP3.18□□□□□ -1.9
CTNNA1-212ENST00000518919 PRO1854Q9UHT4 67 aa3.18□□□□□ -1.9
CTNNA1-212ENST00000518919 NOTCH1P46531 2555 aa3.17□□□□□ -1.9
CTNNA1-212ENST00000518919 DNHD1Q96M86 4753 aa3.17□□□□□ -1.9
CTNNA1-212ENST00000518919 COL6A5A8TX70 2615 aa3.17□□□□□ -1.9
CTNNA1-212ENST00000518919 H3BMG7 143 aa3.17□□□□□ -1.9
CTNNA1-212ENST00000518919 TCL1BO95988 128 aa3.17□□□□□ -1.9
CTNNA1-212ENST00000518919 IFITM1P13164 125 aa3.17□□□□□ -1.9
CTNNA1-212ENST00000518919 DSCR10P59022 87 aa3.17□□□□□ -1.9
CTNNA1-212ENST00000518919 REG3AQ06141 175 aa3.17□□□□□ -1.9
CTNNA1-212ENST00000518919 WFDC2Q14508 124 aa3.17□□□□□ -1.9
CTNNA1-212ENST00000518919 C5orf38Q86SI9 138 aa3.17□□□□□ -1.9
CTNNA1-212ENST00000518919 C3orf56Q8N813 242 aa3.17□□□□□ -1.9
CTNNA1-212ENST00000518919 LINC00308Q8TCZ7 52 aa3.17□□□□□ -1.9
CTNNA1-212ENST00000518919 ICOSQ9Y6W8 199 aa3.17□□□□□ -1.9
CTNNA1-212ENST00000518919 LOC107984156A0A0G2JMH3 177 aa3.16□□□□□ -1.9
CTNNA1-212ENST00000518919 TMEM262E9PQX1 116 aa3.16□□□□□ -1.9
CTNNA1-212ENST00000518919 H7C2G1 150 aa3.16□□□□□ -1.9
CTNNA1-212ENST00000518919 XCL1P47992 114 aa3.16□□□□□ -1.9
CTNNA1-212ENST00000518919 PSMB2P49721 201 aa3.16□□□□□ -1.9
CTNNA1-212ENST00000518919 MEIG1Q5JSS6 88 aa3.16□□□□□ -1.9
CTNNA1-212ENST00000518919 LELP1Q5T871 98 aa3.16□□□□□ -1.9
CTNNA1-212ENST00000518919 LYRM7Q5U5X0 104 aa3.16□□□□□ -1.9
CTNNA1-212ENST00000518919 Q6ZR54 194 aa3.16□□□□□ -1.9
CTNNA1-212ENST00000518919 ARL17AQ8IVW1 177 aa3.16□□□□□ -1.9
CTNNA1-212ENST00000518919 ERG28Q9UKR5 140 aa3.16□□□□□ -1.9
CTNNA1-212ENST00000518919 VPS13DQ5THJ4 4388 aa3.16□□□□□ -1.9
CTNNA1-212ENST00000518919 PLECQ15149 4684 aaKnown RBP3.16□□□□□ -1.9
CTNNA1-212ENST00000518919 NBEAL1Q6ZS30 2694 aa3.16□□□□□ -1.9
CTNNA1-212ENST00000518919 TRBV30A0A0K0K1B3 111 aa3.15□□□□□ -1.91
CTNNA1-212ENST00000518919 F8W1H4 67 aa3.15□□□□□ -1.91
CTNNA1-212ENST00000518919 SH2D6Q7Z4S9 175 aa3.15□□□□□ -1.91
CTNNA1-212ENST00000518919 LINC00269Q8N2A0 174 aa3.15□□□□□ -1.91
CTNNA1-212ENST00000518919 MIR7-3HGQ8N6C7 128 aa3.15□□□□□ -1.91
CTNNA1-212ENST00000518919 KRTAP2-2Q9BYT5 123 aa3.15□□□□□ -1.91
CTNNA1-212ENST00000518919 TOMM7Q9P0U1 55 aa3.15□□□□□ -1.91
CTNNA1-212ENST00000518919 MGAM2Q2M2H8 2515 aa3.15□□□□□ -1.91
CTNNA1-212ENST00000518919 IGLV10-54A0A075B6I4 117 aa3.14□□□□□ -1.91
CTNNA1-212ENST00000518919 TRBV20-1A0A075B6N2 111 aa3.14□□□□□ -1.91
CTNNA1-212ENST00000518919 IBA57-AS1B1ANH7 110 aa3.14□□□□□ -1.91
CTNNA1-212ENST00000518919 KRTAP4-16G5E9R7 235 aaPredicted RBP3.14□□□□□ -1.91
CTNNA1-212ENST00000518919 ANGP03950 147 aaKnown RBP3.14□□□□□ -1.91
CTNNA1-212ENST00000518919 CIRBPQ14011 172 aaKnown RBP3.14□□□□□ -1.91
CTNNA1-212ENST00000518919 SS18Q15532 418 aa3.14□□□□□ -1.91
CTNNA1-212ENST00000518919 ETDBQ3ZM63 59 aa3.14□□□□□ -1.91
CTNNA1-212ENST00000518919 KPRPQ5T749 579 aaPredicted RBP3.14□□□□□ -1.91
CTNNA1-212ENST00000518919 C2orf82Q6UX34 121 aa3.14□□□□□ -1.91
CTNNA1-212ENST00000518919 WFDC10BQ8IUB3 73 aa3.14□□□□□ -1.91
CTNNA1-212ENST00000518919 Q8IZM0 81 aa3.14□□□□□ -1.91
CTNNA1-212ENST00000518919 PRR34Q9NV39 138 aa3.14□□□□□ -1.91
CTNNA1-212ENST00000518919 DNAH10Q8IVF4 4471 aa3.14□□□□□ -1.91
CTNNA1-212ENST00000518919 DNAH7Q8WXX0 4024 aa3.14□□□□□ -1.91
CTNNA1-212ENST00000518919 IGKV2-28A0A075B6P5 120 aa3.13□□□□□ -1.91
CTNNA1-212ENST00000518919 H3BNG1 76 aa3.13□□□□□ -1.91
CTNNA1-212ENST00000518919 K7EIL1 84 aa3.13□□□□□ -1.91
CTNNA1-212ENST00000518919 K7ERU9 68 aa3.13□□□□□ -1.91
CTNNA1-212ENST00000518919 COX7A2LO14548 114 aa3.13□□□□□ -1.91
CTNNA1-212ENST00000518919 IGKV2D-28P01615 120 aa3.13□□□□□ -1.91
CTNNA1-212ENST00000518919 PRB2P02812 416 aaPredicted RBP3.13□□□□□ -1.91
CTNNA1-212ENST00000518919 SCGB1C2P0DMR2 95 aa3.13□□□□□ -1.91
CTNNA1-212ENST00000518919 CCL18P55774 89 aa3.13□□□□□ -1.91
CTNNA1-212ENST00000518919 LINC00158P58513 81 aa3.13□□□□□ -1.91
CTNNA1-212ENST00000518919 ATXN8Q156A1 80 aa3.13□□□□□ -1.91
CTNNA1-212ENST00000518919 LYPD5Q6UWN5 251 aa3.13□□□□□ -1.91
CTNNA1-212ENST00000518919 ENHOQ6UWT2 76 aa3.13□□□□□ -1.91
CTNNA1-212ENST00000518919 ANKRD29Q8N6D5 301 aa3.13□□□□□ -1.91
CTNNA1-212ENST00000518919 LINC00337Q8N6G1 96 aa3.13□□□□□ -1.91
CTNNA1-212ENST00000518919 CLEC2BQ92478 149 aa3.13□□□□□ -1.91
CTNNA1-212ENST00000518919 PRKDCP78527 4128 aaKnown RBP3.13□□□□□ -1.91
CTNNA1-212ENST00000518919 C9JAW5 83 aa3.12□□□□□ -1.91
CTNNA1-212ENST00000518919 M0QXV9 152 aa3.12□□□□□ -1.91
CTNNA1-212ENST00000518919 LST1O00453 97 aa3.12□□□□□ -1.91
CTNNA1-212ENST00000518919 SLC25A20O43772 301 aa3.12□□□□□ -1.91
CTNNA1-212ENST00000518919 CRPP02741 224 aa3.12□□□□□ -1.91
CTNNA1-212ENST00000518919 SPAG11BQ08648 103 aa3.12□□□□□ -1.91
CTNNA1-212ENST00000518919 KRTAP26-1Q6PEX3 210 aa3.12□□□□□ -1.91
CTNNA1-212ENST00000518919 COPS9Q8WXC6 57 aa3.12□□□□□ -1.91
CTNNA1-212ENST00000518919 CARD19Q96LW7 228 aa3.12□□□□□ -1.91
CTNNA1-212ENST00000518919 LINC01600Q96MT4 127 aa3.12□□□□□ -1.91
CTNNA1-212ENST00000518919 TM2D3Q9BRN9 247 aa3.12□□□□□ -1.91
CTNNA1-212ENST00000518919 SND1-IT1Q9HBX3 110 aa3.12□□□□□ -1.91
CTNNA1-212ENST00000518919 KLK12Q9UKR0 248 aa3.12□□□□□ -1.91
CTNNA1-212ENST00000518919 DEFB131BA0A096LNP1 70 aa3.11□□□□□ -1.91
CTNNA1-212ENST00000518919 TRBV10-2A0A0K0K1G8 114 aa3.11□□□□□ -1.91
CTNNA1-212ENST00000518919 PFN2P35080 140 aa3.11□□□□□ -1.91
CTNNA1-212ENST00000518919 CXCL5P42830 114 aa3.11□□□□□ -1.91
CTNNA1-212ENST00000518919 ESRGQ1W209 222 aa3.11□□□□□ -1.91
CTNNA1-212ENST00000518919 MRPL55Q7Z7F7 128 aaKnown RBP3.11□□□□□ -1.91
CTNNA1-212ENST00000518919 TEN1Q86WV5 123 aa3.11□□□□□ -1.91
CTNNA1-212ENST00000518919 Q8NDZ9 215 aa3.11□□□□□ -1.91
CTNNA1-212ENST00000518919 KLK5Q9Y337 293 aaPredicted RBP3.11□□□□□ -1.91
CTNNA1-212ENST00000518919 DNAH17Q9UFH2 4485 aa3.11□□□□□ -1.91
CTNNA1-212ENST00000518919 STAB2Q8WWQ8 2551 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms