RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 BAGE2Q86Y30 109 aa2.22□□□□□ -2.05
CTNNA1-202ENST00000517533 U3KQA8 63 aa2.22□□□□□ -2.05
CTNNA1-202ENST00000517533 A0A0C4DFX4 3053 aa2.22□□□□□ -2.05
CTNNA1-202ENST00000517533 GOLGA4Q13439 2230 aaKnown RBP2.22□□□□□ -2.05
CTNNA1-202ENST00000517533 ZDBF2Q9HCK1 2354 aa2.21□□□□□ -2.06
CTNNA1-202ENST00000517533 M0R3E3 92 aa2.21□□□□□ -2.06
CTNNA1-202ENST00000517533 PRB1P04280 392 aa2.21□□□□□ -2.06
CTNNA1-202ENST00000517533 SAA2P0DJI9 122 aaPredicted RBP2.21□□□□□ -2.06
CTNNA1-202ENST00000517533 CACNA1EQ15878 2313 aa2.21□□□□□ -2.06
CTNNA1-202ENST00000517533 RABAC1Q9UI14 185 aa2.21□□□□□ -2.06
CTNNA1-202ENST00000517533 WDR87Q6ZQQ6 2873 aa2.21□□□□□ -2.06
CTNNA1-202ENST00000517533 LAMA1P25391 3075 aa2.2□□□□□ -2.06
CTNNA1-202ENST00000517533 A0A087WXM4 84 aa2.2□□□□□ -2.06
CTNNA1-202ENST00000517533 UQCR11O14957 56 aa2.2□□□□□ -2.06
CTNNA1-202ENST00000517533 WFDC2Q14508 124 aa2.2□□□□□ -2.06
CTNNA1-202ENST00000517533 NMSQ5H8A3 153 aa2.2□□□□□ -2.06
CTNNA1-202ENST00000517533 PSMG4Q5JS54 123 aa2.2□□□□□ -2.06
CTNNA1-202ENST00000517533 S100ZQ8WXG8 99 aa2.2□□□□□ -2.06
CTNNA1-202ENST00000517533 PLAC4Q8WY50 150 aa2.2□□□□□ -2.06
CTNNA1-202ENST00000517533 TTC28Q96AY4 2481 aa2.2□□□□□ -2.06
CTNNA1-202ENST00000517533 FRYLO94915 3013 aa2.19□□□□□ -2.06
CTNNA1-202ENST00000517533 VCANP13611 3396 aa2.19□□□□□ -2.06
CTNNA1-202ENST00000517533 A0A096LNT2 108 aa2.19□□□□□ -2.06
CTNNA1-202ENST00000517533 CPSF4LA6NMK7 179 aaKnown RBP2.19□□□□□ -2.06
CTNNA1-202ENST00000517533 ZNF815PA8K554 130 aa2.19□□□□□ -2.06
CTNNA1-202ENST00000517533 DEFB124Q8NES8 71 aa2.19□□□□□ -2.06
CTNNA1-202ENST00000517533 PRR15LQ9BU68 103 aa2.19□□□□□ -2.06
CTNNA1-202ENST00000517533 ASXL3Q9C0F0 2248 aa2.18□□□□□ -2.06
CTNNA1-202ENST00000517533 A0A1B0GWA3 101 aa2.18□□□□□ -2.06
CTNNA1-202ENST00000517533 F8WEM9 126 aa2.18□□□□□ -2.06
CTNNA1-202ENST00000517533 ST20Q9HBF5 79 aa2.18□□□□□ -2.06
CTNNA1-202ENST00000517533 MED13LQ71F56 2210 aa2.17□□□□□ -2.06
CTNNA1-202ENST00000517533 MUC3AQ02505 3323 aa2.17□□□□□ -2.06
CTNNA1-202ENST00000517533 LYNX1P0DP58 116 aa2.17□□□□□ -2.06
CTNNA1-202ENST00000517533 SNRPGP62308 76 aaKnown RBP2.17□□□□□ -2.06
CTNNA1-202ENST00000517533 ADIRFQ15847 76 aa2.17□□□□□ -2.06
CTNNA1-202ENST00000517533 CFAP126Q5VTH2 177 aa2.17□□□□□ -2.06
CTNNA1-202ENST00000517533 FDCSPQ8NFU4 85 aa2.17□□□□□ -2.06
CTNNA1-202ENST00000517533 PSENENQ9NZ42 101 aa2.17□□□□□ -2.06
CTNNA1-202ENST00000517533 CACNA1HO95180 2353 aa2.17□□□□□ -2.06
CTNNA1-202ENST00000517533 WDFY4Q6ZS81 3184 aa2.17□□□□□ -2.06
CTNNA1-202ENST00000517533 DNAH14Q0VDD8 3507 aa2.17□□□□□ -2.06
CTNNA1-202ENST00000517533 ASCC3Q8N3C0 2202 aaKnown RBP2.17□□□□□ -2.06
CTNNA1-202ENST00000517533 VPS13AQ96RL7 3174 aa2.16□□□□□ -2.06
CTNNA1-202ENST00000517533 NCOA6Q14686 2063 aaPredicted RBP2.16□□□□□ -2.06
CTNNA1-202ENST00000517533 J3QKU1 62 aa2.16□□□□□ -2.06
CTNNA1-202ENST00000517533 BCE1O60756 84 aa2.16□□□□□ -2.06
CTNNA1-202ENST00000517533 KRTAP12-4P60329 112 aa2.16□□□□□ -2.06
CTNNA1-202ENST00000517533 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.16□□□□□ -2.06
CTNNA1-202ENST00000517533 CMC2Q9NRP2 79 aa2.16□□□□□ -2.06
CTNNA1-202ENST00000517533 FBN1P35555 2871 aaKnown RBP2.16□□□□□ -2.06
CTNNA1-202ENST00000517533 ZNF292O60281 2723 aa2.16□□□□□ -2.06
CTNNA1-202ENST00000517533 EP300Q09472 2414 aaPredicted RBP2.16□□□□□ -2.06
CTNNA1-202ENST00000517533 KNTC1P50748 2209 aa2.15□□□□□ -2.06
CTNNA1-202ENST00000517533 GVQW2A0A096LPI5 108 aaPredicted RBP2.15□□□□□ -2.07
CTNNA1-202ENST00000517533 C7orf77A4D0Y5 90 aa2.15□□□□□ -2.07
CTNNA1-202ENST00000517533 LINC00472Q9H8W2 130 aa2.15□□□□□ -2.07
CTNNA1-202ENST00000517533 OTOGLQ3ZCN5 2332 aa2.15□□□□□ -2.07
CTNNA1-202ENST00000517533 USP34Q70CQ2 3546 aa2.15□□□□□ -2.07
CTNNA1-202ENST00000517533 DMDP11532 3685 aa2.14□□□□□ -2.07
CTNNA1-202ENST00000517533 MYO15AQ9UKN7 3530 aa2.14□□□□□ -2.07
CTNNA1-202ENST00000517533 ABCA1O95477 2261 aa2.14□□□□□ -2.07
CTNNA1-202ENST00000517533 F2Z2F3 143 aa2.14□□□□□ -2.07
CTNNA1-202ENST00000517533 FXYD6P3P58550 94 aa2.14□□□□□ -2.07
CTNNA1-202ENST00000517533 DEFB109BQ30KR1 87 aa2.14□□□□□ -2.07
CTNNA1-202ENST00000517533 Q5BKY6 102 aa2.14□□□□□ -2.07
CTNNA1-202ENST00000517533 PROK2Q9HC23 129 aa2.14□□□□□ -2.07
CTNNA1-202ENST00000517533 RIF1Q5UIP0 2472 aaKnown RBP2.14□□□□□ -2.07
CTNNA1-202ENST00000517533 PTPRZ1P23471 2315 aaPredicted RBP2.13□□□□□ -2.07
CTNNA1-202ENST00000517533 A0A087WVE0 104 aa2.13□□□□□ -2.07
CTNNA1-202ENST00000517533 RPL37P61927 97 aaKnown RBP2.13□□□□□ -2.07
CTNNA1-202ENST00000517533 SPINK13Q1W4C9 94 aa2.13□□□□□ -2.07
CTNNA1-202ENST00000517533 MUC6Q6W4X9 2439 aa2.13□□□□□ -2.07
CTNNA1-202ENST00000517533 FAM186AA6NE01 2351 aa2.12□□□□□ -2.07
CTNNA1-202ENST00000517533 MRPL33O75394 65 aaKnown RBP2.12□□□□□ -2.07
CTNNA1-202ENST00000517533 MGPP08493 103 aa2.12□□□□□ -2.07
CTNNA1-202ENST00000517533 ARMS2P0C7Q2 107 aa2.12□□□□□ -2.07
CTNNA1-202ENST00000517533 Q6ZRX8 168 aa2.12□□□□□ -2.07
CTNNA1-202ENST00000517533 SMIM11BQ8TCY0 68 aa2.12□□□□□ -2.07
CTNNA1-202ENST00000517533 SMIM4Q8WVI0 70 aa2.12□□□□□ -2.07
CTNNA1-202ENST00000517533 SPRR4Q96PI1 79 aa2.12□□□□□ -2.07
CTNNA1-202ENST00000517533 GVINP1Q7Z2Y8 2422 aa2.12□□□□□ -2.07
CTNNA1-202ENST00000517533 AHCTF1Q8WYP5 2266 aa2.12□□□□□ -2.07
CTNNA1-202ENST00000517533 CNOT1A5YKK6 2376 aaKnown RBP2.12□□□□□ -2.07
CTNNA1-202ENST00000517533 CFAP54Q96N23 3096 aa2.11□□□□□ -2.07
CTNNA1-202ENST00000517533 G3V318 75 aa2.11□□□□□ -2.07
CTNNA1-202ENST00000517533 PDCD5O14737 125 aa2.11□□□□□ -2.07
CTNNA1-202ENST00000517533 BVES-AS1Q5T3Y7 98 aa2.11□□□□□ -2.07
CTNNA1-202ENST00000517533 LINC01590Q5TEZ4 76 aa2.11□□□□□ -2.07
CTNNA1-202ENST00000517533 LINC01600Q96MT4 127 aa2.11□□□□□ -2.07
CTNNA1-202ENST00000517533 SPEGQ15772 3267 aa2.11□□□□□ -2.07
CTNNA1-202ENST00000517533 FLG2Q5D862 2391 aaPredicted RBP2.1□□□□□ -2.07
CTNNA1-202ENST00000517533 DMXL1Q9Y485 3027 aa2.1□□□□□ -2.07
CTNNA1-202ENST00000517533 CEP250Q9BV73 2442 aa2.1□□□□□ -2.07
CTNNA1-202ENST00000517533 WDFY3Q8IZQ1 3526 aa2.1□□□□□ -2.07
CTNNA1-202ENST00000517533 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
CTNNA1-202ENST00000517533 COX17Q14061 63 aa2.1□□□□□ -2.07
CTNNA1-202ENST00000517533 MYO7BQ6PIF6 2116 aa2.1□□□□□ -2.07
CTNNA1-202ENST00000517533 CNTRLQ7Z7A1 2325 aa2.09□□□□□ -2.07
CTNNA1-202ENST00000517533 H3BUT2 72 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms