RNA–Protein interactions for RNA: ENST00000517391.5

CPNE3-202, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 785 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-202ENST00000517391 GNRH2O43555 120 aa2.87□□□□□ -1.95
CPNE3-202ENST00000517391 CRYGDP07320 174 aa2.87□□□□□ -1.95
CPNE3-202ENST00000517391 C3orf79P0CE67 100 aa2.87□□□□□ -1.95
CPNE3-202ENST00000517391 S100A4P26447 101 aaKnown RBP2.87□□□□□ -1.95
CPNE3-202ENST00000517391 ASIPP42127 132 aa2.87□□□□□ -1.95
CPNE3-202ENST00000517391 HINT1P49773 126 aaPredicted RBP2.87□□□□□ -1.95
CPNE3-202ENST00000517391 MP68P56378 58 aa2.87□□□□□ -1.95
CPNE3-202ENST00000517391 KRTDAPP60985 99 aa2.87□□□□□ -1.95
CPNE3-202ENST00000517391 CKS1BP61024 79 aa2.87□□□□□ -1.95
CPNE3-202ENST00000517391 UBE2G1P62253 170 aa2.87□□□□□ -1.95
CPNE3-202ENST00000517391 GNG5P63218 68 aa2.87□□□□□ -1.95
CPNE3-202ENST00000517391 LINC01556Q5JQF7 62 aa2.87□□□□□ -1.95
CPNE3-202ENST00000517391 BVES-AS1Q5T3Y7 98 aa2.87□□□□□ -1.95
CPNE3-202ENST00000517391 CFAP126Q5VTH2 177 aa2.87□□□□□ -1.95
CPNE3-202ENST00000517391 OSTCQ9NRP0 149 aa2.87□□□□□ -1.95
CPNE3-202ENST00000517391 KIAA1109Q2LD37 5005 aa2.86□□□□□ -1.95
CPNE3-202ENST00000517391 A8MWP4 228 aa2.86□□□□□ -1.95
CPNE3-202ENST00000517391 H3BRM9 83 aa2.86□□□□□ -1.95
CPNE3-202ENST00000517391 RNASE3P12724 160 aaKnown RBP2.86□□□□□ -1.95
CPNE3-202ENST00000517391 GNG4P50150 75 aa2.86□□□□□ -1.95
CPNE3-202ENST00000517391 ZNF80P51504 273 aaPredicted RBP2.86□□□□□ -1.95
CPNE3-202ENST00000517391 LELP1Q5T871 98 aa2.86□□□□□ -1.95
CPNE3-202ENST00000517391 ATP5L2Q7Z4Y8 100 aa2.86□□□□□ -1.95
CPNE3-202ENST00000517391 Q86TA4 180 aa2.86□□□□□ -1.95
CPNE3-202ENST00000517391 WFDC10BQ8IUB3 73 aa2.86□□□□□ -1.95
CPNE3-202ENST00000517391 ATP6V0E2Q8NHE4 81 aa2.86□□□□□ -1.95
CPNE3-202ENST00000517391 C18orf32Q8TCD1 76 aa2.86□□□□□ -1.95
CPNE3-202ENST00000517391 TSKUQ8WUA8 353 aa2.86□□□□□ -1.95
CPNE3-202ENST00000517391 CHCHD1Q96BP2 118 aaKnown RBP2.86□□□□□ -1.95
CPNE3-202ENST00000517391 TMEM70Q9BUB7 260 aa2.86□□□□□ -1.95
CPNE3-202ENST00000517391 GTSF1LQ9H1H1 148 aa2.86□□□□□ -1.95
CPNE3-202ENST00000517391 FAT2Q9NYQ8 4349 aa2.86□□□□□ -1.95
CPNE3-202ENST00000517391 DMBT1Q9UGM3 2413 aaPredicted RBP2.85□□□□□ -1.95
CPNE3-202ENST00000517391 A0A087WTM6 91 aa2.85□□□□□ -1.95
CPNE3-202ENST00000517391 TRBV10-1A0A0K0K1A3 114 aa2.85□□□□□ -1.95
CPNE3-202ENST00000517391 SMIM27A0A1W2PRY6 76 aa2.85□□□□□ -1.95
CPNE3-202ENST00000517391 GRIFINA4D1Z8 144 aa2.85□□□□□ -1.95
CPNE3-202ENST00000517391 IBA57-AS1B1ANH7 110 aa2.85□□□□□ -1.95
CPNE3-202ENST00000517391 K7EP34 96 aa2.85□□□□□ -1.95
CPNE3-202ENST00000517391 PSCAO43653 123 aa2.85□□□□□ -1.95
CPNE3-202ENST00000517391 LTAP01374 205 aa2.85□□□□□ -1.95
CPNE3-202ENST00000517391 AMMECR1LQ6DCA0 310 aa2.85□□□□□ -1.95
CPNE3-202ENST00000517391 TMEM126AQ9H061 195 aa2.85□□□□□ -1.95
CPNE3-202ENST00000517391 TMEM191AQ9H0A3 160 aa2.85□□□□□ -1.95
CPNE3-202ENST00000517391 NAT8BQ9UHF3 227 aa2.85□□□□□ -1.95
CPNE3-202ENST00000517391 PHLDA3Q9Y5J5 127 aa2.85□□□□□ -1.95
CPNE3-202ENST00000517391 V9GYV3 84 aa2.85□□□□□ -1.95
CPNE3-202ENST00000517391 DNAH17Q9UFH2 4485 aa2.85□□□□□ -1.95
CPNE3-202ENST00000517391 DNAH2Q9P225 4427 aa2.85□□□□□ -1.95
CPNE3-202ENST00000517391 HERC2O95714 4834 aa2.84□□□□□ -1.95
CPNE3-202ENST00000517391 DNAH11Q96DT5 4516 aa2.84□□□□□ -1.95
CPNE3-202ENST00000517391 TRBV20OR9-2A0A075B6H5 130 aa2.84□□□□□ -1.95
CPNE3-202ENST00000517391 H3BVH4 76 aa2.84□□□□□ -1.95
CPNE3-202ENST00000517391 SH2D1AO60880 128 aa2.84□□□□□ -1.95
CPNE3-202ENST00000517391 LINC00694P0DN24 101 aa2.84□□□□□ -1.95
CPNE3-202ENST00000517391 COX8AP10176 69 aa2.84□□□□□ -1.95
CPNE3-202ENST00000517391 HSD52Q0P140 79 aa2.84□□□□□ -1.95
CPNE3-202ENST00000517391 FAM19A3Q7Z5A8 133 aa2.84□□□□□ -1.95
CPNE3-202ENST00000517391 ZC2HC1AQ96GY0 325 aa2.84□□□□□ -1.95
CPNE3-202ENST00000517391 AP1S3Q96PC3 154 aa2.84□□□□□ -1.95
CPNE3-202ENST00000517391 SPANXB1Q9NS25 103 aaPredicted RBP2.84□□□□□ -1.95
CPNE3-202ENST00000517391 PKD1P98161 4303 aa2.84□□□□□ -1.95
CPNE3-202ENST00000517391 TRBV7-3A0A075B6L6 115 aa2.83□□□□□ -1.96
CPNE3-202ENST00000517391 IGHV3-73A0A0B4J1V6 119 aa2.83□□□□□ -1.96
CPNE3-202ENST00000517391 A0A0B4J2C4 111 aa2.83□□□□□ -1.96
CPNE3-202ENST00000517391 MUC21A0A0G2JKD1 596 aa2.83□□□□□ -1.96
CPNE3-202ENST00000517391 MUC21A0A140T8X8 626 aa2.83□□□□□ -1.96
CPNE3-202ENST00000517391 F8W1H4 67 aa2.83□□□□□ -1.96
CPNE3-202ENST00000517391 SYS1-DBNDD2H3BUS1 97 aa2.83□□□□□ -1.96
CPNE3-202ENST00000517391 ARMS2P0C7Q2 107 aa2.83□□□□□ -1.96
CPNE3-202ENST00000517391 CRIP1P50238 77 aa2.83□□□□□ -1.96
CPNE3-202ENST00000517391 TMEM97Q5BJF2 176 aa2.83□□□□□ -1.96
CPNE3-202ENST00000517391 FAM74A4Q5TZK3 123 aa2.83□□□□□ -1.96
CPNE3-202ENST00000517391 LINC01545Q5VT33 79 aa2.83□□□□□ -1.96
CPNE3-202ENST00000517391 HSPB8Q9UJY1 196 aa2.83□□□□□ -1.96
CPNE3-202ENST00000517391 CYSLTR1Q9Y271 337 aa2.83□□□□□ -1.96
CPNE3-202ENST00000517391 A0A087WX48 190 aa2.82□□□□□ -1.96
CPNE3-202ENST00000517391 A0A1W2PPM0 123 aa2.82□□□□□ -1.96
CPNE3-202ENST00000517391 F2Z2F3 143 aa2.82□□□□□ -1.96
CPNE3-202ENST00000517391 M0R381 172 aa2.82□□□□□ -1.96
CPNE3-202ENST00000517391 IGHV3-30P01768 117 aa2.82□□□□□ -1.96
CPNE3-202ENST00000517391 IGHV3-33P01772 117 aa2.82□□□□□ -1.96
CPNE3-202ENST00000517391 IGHV3-30-3P0DP02 117 aa2.82□□□□□ -1.96
CPNE3-202ENST00000517391 IGHV3-30-5P0DP03 117 aa2.82□□□□□ -1.96
CPNE3-202ENST00000517391 FABP2P12104 132 aa2.82□□□□□ -1.96
CPNE3-202ENST00000517391 CENPWQ5EE01 88 aa2.82□□□□□ -1.96
CPNE3-202ENST00000517391 SPANXN1Q5VSR9 72 aa2.82□□□□□ -1.96
CPNE3-202ENST00000517391 Q8N814 137 aa2.82□□□□□ -1.96
CPNE3-202ENST00000517391 OR10AG1Q8NH19 301 aa2.82□□□□□ -1.96
CPNE3-202ENST00000517391 UBE2WQ96B02 151 aa2.82□□□□□ -1.96
CPNE3-202ENST00000517391 HIGD1BQ9P298 99 aa2.82□□□□□ -1.96
CPNE3-202ENST00000517391 ERG28Q9UKR5 140 aa2.82□□□□□ -1.96
CPNE3-202ENST00000517391 FLG2Q5D862 2391 aaPredicted RBP2.82□□□□□ -1.96
CPNE3-202ENST00000517391 TRBV6-8A0A0A6YYG3 113 aa2.81□□□□□ -1.96
CPNE3-202ENST00000517391 IGKV2-24A0A0C4DH68 120 aa2.81□□□□□ -1.96
CPNE3-202ENST00000517391 TMEM262E9PQX1 116 aa2.81□□□□□ -1.96
CPNE3-202ENST00000517391 LEPROTL1O95214 131 aa2.81□□□□□ -1.96
CPNE3-202ENST00000517391 UBE2D3P61077 147 aa2.81□□□□□ -1.96
CPNE3-202ENST00000517391 UBE2D2P62837 147 aa2.81□□□□□ -1.96
CPNE3-202ENST00000517391 RPS28P62857 69 aaKnown RBP2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms