RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 LAMC1P11047 1609 aa1.58□□□□□ -2.16
RNU4-60P-201ENST00000517239 LINC00959A0A1B0GUT2 108 aa1.58□□□□□ -2.16
RNU4-60P-201ENST00000517239 J3QKU1 62 aa1.58□□□□□ -2.16
RNU4-60P-201ENST00000517239 K7EIL1 84 aa1.58□□□□□ -2.16
RNU4-60P-201ENST00000517239 HMGA1P17096 107 aaKnown RBP1.58□□□□□ -2.16
RNU4-60P-201ENST00000517239 FLG2Q5D862 2391 aaPredicted RBP1.57□□□□□ -2.16
RNU4-60P-201ENST00000517239 FAM103A1Q9BTL3 118 aaKnown RBP1.57□□□□□ -2.16
RNU4-60P-201ENST00000517239 CNTRLQ7Z7A1 2325 aa1.57□□□□□ -2.16
RNU4-60P-201ENST00000517239 COX7BP24311 80 aa1.56□□□□□ -2.16
RNU4-60P-201ENST00000517239 SYCP2Q9BX26 1530 aa1.56□□□□□ -2.16
RNU4-60P-201ENST00000517239 TULP4Q9NRJ4 1543 aa1.56□□□□□ -2.16
RNU4-60P-201ENST00000517239 DDX60LQ5H9U9 1706 aaKnown RBP1.55□□□□□ -2.16
RNU4-60P-201ENST00000517239 KRTAP12-4P60329 112 aa1.55□□□□□ -2.16
RNU4-60P-201ENST00000517239 MAST1Q9Y2H9 1570 aa1.55□□□□□ -2.16
RNU4-60P-201ENST00000517239 EP400Q96L91 3159 aa1.53□□□□□ -2.16
RNU4-60P-201ENST00000517239 LINC01549A6NIU2 74 aa1.53□□□□□ -2.16
RNU4-60P-201ENST00000517239 LY75O60449 1722 aa1.53□□□□□ -2.16
RNU4-60P-201ENST00000517239 ABCC6O95255 1503 aa1.53□□□□□ -2.16
RNU4-60P-201ENST00000517239 NWD1Q149M9 1564 aa1.53□□□□□ -2.16
RNU4-60P-201ENST00000517239 Q6ZSA8 131 aa1.53□□□□□ -2.16
RNU4-60P-201ENST00000517239 CLASP1Q7Z460 1538 aa1.53□□□□□ -2.16
RNU4-60P-201ENST00000517239 ASXL3Q9C0F0 2248 aa1.53□□□□□ -2.16
RNU4-60P-201ENST00000517239 KNTC1P50748 2209 aa1.52□□□□□ -2.17
RNU4-60P-201ENST00000517239 LCE6AA0A183 80 aa1.52□□□□□ -2.17
RNU4-60P-201ENST00000517239 KRTAP9-6A8MVA2 160 aa1.52□□□□□ -2.17
RNU4-60P-201ENST00000517239 RPL38P63173 70 aaKnown RBP1.52□□□□□ -2.17
RNU4-60P-201ENST00000517239 A0A1B0GUL6 1792 aa1.52□□□□□ -2.17
RNU4-60P-201ENST00000517239 A0A0D9SFI3 127 aa1.51□□□□□ -2.17
RNU4-60P-201ENST00000517239 SPTY2D1-AS1A0A0U1RR47 76 aa1.51□□□□□ -2.17
RNU4-60P-201ENST00000517239 NDUFA4O00483 81 aa1.51□□□□□ -2.17
RNU4-60P-201ENST00000517239 ANGP03950 147 aaKnown RBP1.51□□□□□ -2.17
RNU4-60P-201ENST00000517239 ENHOQ6UWT2 76 aa1.51□□□□□ -2.17
RNU4-60P-201ENST00000517239 TJP1Q07157 1748 aa1.51□□□□□ -2.17
RNU4-60P-201ENST00000517239 CPS1P31327 1500 aa1.5□□□□□ -2.17
RNU4-60P-201ENST00000517239 KRTAP12-3P60328 96 aa1.5□□□□□ -2.17
RNU4-60P-201ENST00000517239 ADCY10Q96PN6 1610 aa1.5□□□□□ -2.17
RNU4-60P-201ENST00000517239 UGGT1Q9NYU2 1555 aa1.5□□□□□ -2.17
RNU4-60P-201ENST00000517239 CACNA1AO00555 2505 aa1.49□□□□□ -2.17
RNU4-60P-201ENST00000517239 TNRC18O15417 2968 aaPredicted RBP1.49□□□□□ -2.17
RNU4-60P-201ENST00000517239 ANKRD17O75179 2603 aaKnown RBP1.49□□□□□ -2.17
RNU4-60P-201ENST00000517239 TP53AIP1Q9HCN2 124 aa1.49□□□□□ -2.17
RNU4-60P-201ENST00000517239 NAV3Q8IVL0 2385 aa1.49□□□□□ -2.17
RNU4-60P-201ENST00000517239 C3P01024 1663 aa1.48□□□□□ -2.17
RNU4-60P-201ENST00000517239 TNRC6CQ9HCJ0 1690 aaKnown RBP1.48□□□□□ -2.17
RNU4-60P-201ENST00000517239 SPINK9Q5DT21 86 aa1.48□□□□□ -2.17
RNU4-60P-201ENST00000517239 KRTAP5-3Q6L8H2 238 aa1.48□□□□□ -2.17
RNU4-60P-201ENST00000517239 UBL5Q9BZL1 73 aa1.48□□□□□ -2.17
RNU4-60P-201ENST00000517239 PCNTO95613 3336 aa1.48□□□□□ -2.17
RNU4-60P-201ENST00000517239 ANKRD36CQ5JPF3 1778 aa1.47□□□□□ -2.17
RNU4-60P-201ENST00000517239 CPSF4LA6NMK7 179 aaKnown RBP1.47□□□□□ -2.17
RNU4-60P-201ENST00000517239 I3L2K1 104 aa1.47□□□□□ -2.17
RNU4-60P-201ENST00000517239 ARL14EPLP0DKL9 152 aa1.47□□□□□ -2.17
RNU4-60P-201ENST00000517239 JMJD1CQ15652 2540 aa1.47□□□□□ -2.17
RNU4-60P-201ENST00000517239 SORL1Q92673 2214 aa1.47□□□□□ -2.17
RNU4-60P-201ENST00000517239 FANCD2Q9BXW9 1451 aa1.46□□□□□ -2.18
RNU4-60P-201ENST00000517239 PIGYQ3MUY2 71 aa1.46□□□□□ -2.18
RNU4-60P-201ENST00000517239 FXYD6Q9H0Q3 95 aa1.46□□□□□ -2.18
RNU4-60P-201ENST00000517239 GOLGB1Q14789 3259 aaKnown RBP1.46□□□□□ -2.18
RNU4-60P-201ENST00000517239 PDE4DIPQ5VU43 2346 aa1.46□□□□□ -2.18
RNU4-60P-201ENST00000517239 URB1O60287 2271 aaKnown RBP1.46□□□□□ -2.18
RNU4-60P-201ENST00000517239 UTRNP46939 3433 aa1.46□□□□□ -2.18
RNU4-60P-201ENST00000517239 HIVEP2P31629 2446 aa1.45□□□□□ -2.18
RNU4-60P-201ENST00000517239 CRIPTQ9P021 101 aa1.45□□□□□ -2.18
RNU4-60P-201ENST00000517239 PRO0255Q9UI72 69 aa1.45□□□□□ -2.18
RNU4-60P-201ENST00000517239 ROS1P08922 2347 aa1.44□□□□□ -2.18
RNU4-60P-201ENST00000517239 FCER1GP30273 86 aa1.44□□□□□ -2.18
RNU4-60P-201ENST00000517239 USMG5Q96IX5 58 aa1.44□□□□□ -2.18
RNU4-60P-201ENST00000517239 CNFNQ9BYD5 112 aa1.44□□□□□ -2.18
RNU4-60P-201ENST00000517239 BIVM-ERCC5R4GMW8 1640 aa1.44□□□□□ -2.18
RNU4-60P-201ENST00000517239 AHCTF1Q8WYP5 2266 aa1.43□□□□□ -2.18
RNU4-60P-201ENST00000517239 RP1L1Q8IWN7 2480 aaPredicted RBP1.43□□□□□ -2.18
RNU4-60P-201ENST00000517239 I3L3M4 83 aa1.43□□□□□ -2.18
RNU4-60P-201ENST00000517239 C10orf95Q9H7T3 257 aa1.43□□□□□ -2.18
RNU4-60P-201ENST00000517239 FAM208BQ5VWN6 2430 aa1.41□□□□□ -2.18
RNU4-60P-201ENST00000517239 COL6A6A6NMZ7 2263 aa1.41□□□□□ -2.18
RNU4-60P-201ENST00000517239 NRXN3Q9Y4C0 1643 aa1.41□□□□□ -2.18
RNU4-60P-201ENST00000517239 K7EQZ3 153 aa1.41□□□□□ -2.18
RNU4-60P-201ENST00000517239 COX6A2Q02221 97 aa1.41□□□□□ -2.18
RNU4-60P-201ENST00000517239 DEFB123Q8N688 67 aa1.41□□□□□ -2.18
RNU4-60P-201ENST00000517239 A0A0D9SG42 100 aa1.4□□□□□ -2.19
RNU4-60P-201ENST00000517239 TOGARAM1Q9Y4F4 1720 aa1.4□□□□□ -2.19
RNU4-60P-201ENST00000517239 Q8IZM0 81 aa1.39□□□□□ -2.19
RNU4-60P-201ENST00000517239 UNC79Q9P2D8 2635 aa1.39□□□□□ -2.19
RNU4-60P-201ENST00000517239 C4AP0C0L4 1744 aa1.38□□□□□ -2.19
RNU4-60P-201ENST00000517239 C4BP0C0L5 1744 aa1.38□□□□□ -2.19
RNU4-60P-201ENST00000517239 ABCA5Q8WWZ7 1642 aa1.38□□□□□ -2.19
RNU4-60P-201ENST00000517239 K7EMI3 77 aa1.38□□□□□ -2.19
RNU4-60P-201ENST00000517239 MRPL34Q9BQ48 92 aaKnown RBP1.38□□□□□ -2.19
RNU4-60P-201ENST00000517239 KCNQ1DNQ9H478 68 aa1.38□□□□□ -2.19
RNU4-60P-201ENST00000517239 COL6A3P12111 3177 aa1.38□□□□□ -2.19
RNU4-60P-201ENST00000517239 A0A0C4DFX4 3053 aa1.38□□□□□ -2.19
RNU4-60P-201ENST00000517239 UNC80Q8N2C7 3258 aa1.37□□□□□ -2.19
RNU4-60P-201ENST00000517239 SNRPGP15A8MWD9 76 aa1.37□□□□□ -2.19
RNU4-60P-201ENST00000517239 PKD1L2Q7Z442 2459 aa1.37□□□□□ -2.19
RNU4-60P-201ENST00000517239 ETDCA0A1B0GVM5 59 aa1.36□□□□□ -2.19
RNU4-60P-201ENST00000517239 KRTAP10-4P60372 401 aaPredicted RBP1.36□□□□□ -2.19
RNU4-60P-201ENST00000517239 ASH1LQ9NR48 2969 aaKnown RBP1.36□□□□□ -2.19
RNU4-60P-201ENST00000517239 GOLGA4Q13439 2230 aaKnown RBP1.36□□□□□ -2.19
RNU4-60P-201ENST00000517239 TOP2AP11388 1531 aaKnown RBP1.35□□□□□ -2.19
RNU4-60P-201ENST00000517239 M0R1W7 72 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms