RNA–Protein interactions for RNA: ENST00000515143.5

SPOCK3-223, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, human

TSL 4

Gene SPOCK3, Length 565 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPOCK3-223	ENST00000515143	CRYGA	P11844	174 aa		4.26	□□□□□ -1.73
SPOCK3-223	ENST00000515143	LINC00310	P59036	64 aa		4.26	□□□□□ -1.73
SPOCK3-223	ENST00000515143	SVBP	Q8N300	66 aa		4.26	□□□□□ -1.73
SPOCK3-223	ENST00000515143	CHCHD1	Q96BP2	118 aa	Known RBP	4.26	□□□□□ -1.73
SPOCK3-223	ENST00000515143	SND1-IT1	Q9HBX3	110 aa		4.26	□□□□□ -1.73
SPOCK3-223	ENST00000515143	C11orf86	A6NJI1	115 aa		4.25	□□□□□ -1.73
SPOCK3-223	ENST00000515143	RPL37AP8	A6NKH3	93 aa		4.25	□□□□□ -1.73
SPOCK3-223	ENST00000515143	RPL24	P83731	157 aa	Known RBP	4.25	□□□□□ -1.73
SPOCK3-223	ENST00000515143	BAGE3	Q86Y29	109 aa		4.25	□□□□□ -1.73
SPOCK3-223	ENST00000515143	ERG28	Q9UKR5	140 aa		4.25	□□□□□ -1.73
SPOCK3-223	ENST00000515143	LOC107984156	A0A0G2JMH3	177 aa		4.24	□□□□□ -1.73
SPOCK3-223	ENST00000515143	TMEM223	A0PJW6	202 aa		4.24	□□□□□ -1.73
SPOCK3-223	ENST00000515143	KRTAP13-2	Q52LG2	175 aa		4.24	□□□□□ -1.73
SPOCK3-223	ENST00000515143	ARL17A	Q8IVW1	177 aa		4.24	□□□□□ -1.73
SPOCK3-223	ENST00000515143	NKAPP1	Q8N9T2	125 aa		4.24	□□□□□ -1.73
SPOCK3-223	ENST00000515143		M0R378	163 aa		4.23	□□□□□ -1.73
SPOCK3-223	ENST00000515143	APOC3	P02656	99 aa		4.23	□□□□□ -1.73
SPOCK3-223	ENST00000515143		Q8NDZ9	215 aa		4.23	□□□□□ -1.73
SPOCK3-223	ENST00000515143	PLEKHB2	Q96CS7	222 aa		4.23	□□□□□ -1.73
SPOCK3-223	ENST00000515143	TMEM126A	Q9H061	195 aa		4.23	□□□□□ -1.73
SPOCK3-223	ENST00000515143	MUC2	Q02817	5179 aa		4.22	□□□□□ -1.73
SPOCK3-223	ENST00000515143	LINC00587	B1AMM8	73 aa		4.22	□□□□□ -1.73
SPOCK3-223	ENST00000515143	PFN2	P35080	140 aa		4.22	□□□□□ -1.73
SPOCK3-223	ENST00000515143	SPRR1A	P35321	89 aa		4.22	□□□□□ -1.73
SPOCK3-223	ENST00000515143	NDUFA5	Q16718	116 aa		4.22	□□□□□ -1.73
SPOCK3-223	ENST00000515143	TYMSOS	Q8TAI1	123 aa		4.22	□□□□□ -1.73
SPOCK3-223	ENST00000515143	IFI27L1	Q96BM0	104 aa		4.22	□□□□□ -1.73
SPOCK3-223	ENST00000515143	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.22	□□□□□ -1.73
SPOCK3-223	ENST00000515143	IGKV2D-26	A0A0A0MRZ7	120 aa		4.21	□□□□□ -1.74
SPOCK3-223	ENST00000515143	GAGE10	A6NGK3	116 aa		4.21	□□□□□ -1.74
SPOCK3-223	ENST00000515143	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.21	□□□□□ -1.74
SPOCK3-223	ENST00000515143	NDUFA6	P56556	154 aa		4.21	□□□□□ -1.74
SPOCK3-223	ENST00000515143	HERV-K104	P63124	156 aa		4.21	□□□□□ -1.74
SPOCK3-223	ENST00000515143	PMCHL1	Q16048	86 aa		4.21	□□□□□ -1.74
SPOCK3-223	ENST00000515143	TMEM170B	Q5T4T1	132 aa		4.21	□□□□□ -1.74
SPOCK3-223	ENST00000515143	KCNQ1DN	Q9H478	68 aa		4.21	□□□□□ -1.74
SPOCK3-223	ENST00000515143	UBE2A	P49459	152 aa		4.2	□□□□□ -1.74
SPOCK3-223	ENST00000515143	LINC00337	Q8N6G1	96 aa		4.2	□□□□□ -1.74
SPOCK3-223	ENST00000515143	IGKV2-28	A0A075B6P5	120 aa		4.19	□□□□□ -1.74
SPOCK3-223	ENST00000515143	TMEM238	C9JI98	176 aa		4.19	□□□□□ -1.74
SPOCK3-223	ENST00000515143	SCO1	O75880	301 aa		4.19	□□□□□ -1.74
SPOCK3-223	ENST00000515143	IGKV2D-28	P01615	120 aa		4.19	□□□□□ -1.74
SPOCK3-223	ENST00000515143	PRR4	Q16378	134 aa		4.19	□□□□□ -1.74
SPOCK3-223	ENST00000515143	SPAG11A	Q6PDA7	123 aa		4.19	□□□□□ -1.74
SPOCK3-223	ENST00000515143	ANAPC11	Q9NYG5	84 aa		4.19	□□□□□ -1.74
SPOCK3-223	ENST00000515143	LINC00158	P58513	81 aa		4.18	□□□□□ -1.74
SPOCK3-223	ENST00000515143	TPRXL	Q17RH7	258 aa		4.18	□□□□□ -1.74
SPOCK3-223	ENST00000515143	LCE3B	Q5TA77	95 aa		4.18	□□□□□ -1.74
SPOCK3-223	ENST00000515143	TRBV10-2	A0A0K0K1G8	114 aa		4.17	□□□□□ -1.74
SPOCK3-223	ENST00000515143	MYMX	A0A1B0GTQ4	84 aa		4.17	□□□□□ -1.74
SPOCK3-223	ENST00000515143	PRY	O14603	147 aa		4.17	□□□□□ -1.74
SPOCK3-223	ENST00000515143	TRGC2	P03986	189 aa		4.17	□□□□□ -1.74
SPOCK3-223	ENST00000515143	SMIM13	P0DJ93	91 aa		4.17	□□□□□ -1.74
SPOCK3-223	ENST00000515143	PLN	P26678	52 aa		4.17	□□□□□ -1.74
SPOCK3-223	ENST00000515143	LINC00483	Q53H64	154 aa		4.17	□□□□□ -1.74
SPOCK3-223	ENST00000515143	FAM19A1	Q7Z5A9	133 aa		4.17	□□□□□ -1.74
SPOCK3-223	ENST00000515143	CBLN2	Q8IUK8	224 aa		4.17	□□□□□ -1.74
SPOCK3-223	ENST00000515143	LINC00304	Q8N9R0	145 aa		4.17	□□□□□ -1.74
SPOCK3-223	ENST00000515143	SPRR4	Q96PI1	79 aa		4.17	□□□□□ -1.74
SPOCK3-223	ENST00000515143	NDUFA12	Q9UI09	145 aa		4.17	□□□□□ -1.74
SPOCK3-223	ENST00000515143	TMA7	Q9Y2S6	64 aa	Known RBP	4.17	□□□□□ -1.74
SPOCK3-223	ENST00000515143	COLCA2	A8K830	154 aa		4.16	□□□□□ -1.74
SPOCK3-223	ENST00000515143	LEPROT	O15243	131 aa		4.16	□□□□□ -1.74
SPOCK3-223	ENST00000515143	HSBP1	O75506	76 aa		4.16	□□□□□ -1.74
SPOCK3-223	ENST00000515143	NDUFC2	O95298	119 aa		4.16	□□□□□ -1.74
SPOCK3-223	ENST00000515143	TSPAN13	O95857	204 aa		4.16	□□□□□ -1.74
SPOCK3-223	ENST00000515143	NMU	P48645	174 aa		4.16	□□□□□ -1.74
SPOCK3-223	ENST00000515143	PRLH	P81277	87 aa		4.16	□□□□□ -1.74
SPOCK3-223	ENST00000515143	FAM19A2	Q8N3H0	131 aa		4.16	□□□□□ -1.74
SPOCK3-223	ENST00000515143	MIR7-3HG	Q8N6C7	128 aa		4.16	□□□□□ -1.74
SPOCK3-223	ENST00000515143	MAP1LC3C	Q9BXW4	147 aa		4.16	□□□□□ -1.74
SPOCK3-223	ENST00000515143	LEPROTL1	O95214	131 aa		4.15	□□□□□ -1.75
SPOCK3-223	ENST00000515143	BOD1L2	Q8IYS8	172 aa		4.15	□□□□□ -1.75
SPOCK3-223	ENST00000515143	HSPB8	Q9UJY1	196 aa		4.15	□□□□□ -1.75
SPOCK3-223	ENST00000515143	ZNF706	Q9Y5V0	76 aa	Predicted RBP	4.15	□□□□□ -1.75
SPOCK3-223	ENST00000515143	C5orf52	A6NGY3	159 aa		4.14	□□□□□ -1.75
SPOCK3-223	ENST00000515143		B5MCH6	92 aa		4.14	□□□□□ -1.75
SPOCK3-223	ENST00000515143	SERF1A	O75920	110 aa		4.14	□□□□□ -1.75
SPOCK3-223	ENST00000515143	IGLV6-57	P01721	117 aa		4.14	□□□□□ -1.75
SPOCK3-223	ENST00000515143	TSPEAR-AS2	P59090	65 aa		4.14	□□□□□ -1.75
SPOCK3-223	ENST00000515143	RPS29	P62273	56 aa	Known RBP	4.14	□□□□□ -1.75
SPOCK3-223	ENST00000515143	MEIG1	Q5JSS6	88 aa		4.14	□□□□□ -1.75
SPOCK3-223	ENST00000515143	FP248	Q71RG6	208 aa	Predicted RBP	4.14	□□□□□ -1.75
SPOCK3-223	ENST00000515143	TRBV10-3	A0A0K0K1G6	114 aa		4.13	□□□□□ -1.75
SPOCK3-223	ENST00000515143		J3QQQ9	107 aa		4.13	□□□□□ -1.75
SPOCK3-223	ENST00000515143	ATP6V1G1	O75348	118 aa		4.13	□□□□□ -1.75
SPOCK3-223	ENST00000515143	DPM2	O94777	84 aa		4.13	□□□□□ -1.75
SPOCK3-223	ENST00000515143	SPINK1	P00995	79 aa		4.13	□□□□□ -1.75
SPOCK3-223	ENST00000515143	KRTAP19-4	Q3LI73	84 aa		4.13	□□□□□ -1.75
SPOCK3-223	ENST00000515143	SSBP3-AS1	Q7Z2R9	100 aa		4.13	□□□□□ -1.75
SPOCK3-223	ENST00000515143	C3orf22	Q8N5N4	141 aa		4.13	□□□□□ -1.75
SPOCK3-223	ENST00000515143	SMCR5	Q8TEV8	140 aa		4.13	□□□□□ -1.75
SPOCK3-223	ENST00000515143	IGLV7-46	A0A075B6I9	117 aa		4.12	□□□□□ -1.75
SPOCK3-223	ENST00000515143	HIGD2A	Q9BW72	106 aa		4.12	□□□□□ -1.75
SPOCK3-223	ENST00000515143		A0A0U1RQV1	116 aa		4.11	□□□□□ -1.75
SPOCK3-223	ENST00000515143		A0A0U1RRA0	63 aa		4.11	□□□□□ -1.75
SPOCK3-223	ENST00000515143		E9PLD3	99 aa		4.11	□□□□□ -1.75
SPOCK3-223	ENST00000515143	IGKC	P01834	107 aa		4.11	□□□□□ -1.75
SPOCK3-223	ENST00000515143		Q6ZRX8	168 aa		4.11	□□□□□ -1.75
SPOCK3-223	ENST00000515143		Q9BRP9	147 aa		4.11	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms