RNA–Protein interactions for RNA: ENST00000514914.1

SMN2-212, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 2

Gene SMN2, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-212ENST00000514914 SLIT1O75093 1534 aa0.39□□□□□ -2.35
SMN2-212ENST00000514914 PKD1L3Q7Z443 1732 aa0.39□□□□□ -2.35
SMN2-212ENST00000514914 MYMXA0A1B0GTQ4 84 aa0.39□□□□□ -2.35
SMN2-212ENST00000514914 RPL38P63173 70 aaKnown RBP0.39□□□□□ -2.35
SMN2-212ENST00000514914 RGPD3A6NKT7 1758 aaPredicted RBP0.39□□□□□ -2.35
SMN2-212ENST00000514914 SPTBN1Q01082 2364 aaKnown RBP0.39□□□□□ -2.35
SMN2-212ENST00000514914 CLIP1P30622 1438 aa0.38□□□□□ -2.35
SMN2-212ENST00000514914 NEXMIFQ5QGS0 1516 aa0.38□□□□□ -2.35
SMN2-212ENST00000514914 AHNAKQ09666 5890 aaKnown RBP0.38□□□□□ -2.35
SMN2-212ENST00000514914 PTPN13Q12923 2485 aa0.38□□□□□ -2.35
SMN2-212ENST00000514914 KANTRA0A1W2PQU2 76 aa0.38□□□□□ -2.35
SMN2-212ENST00000514914 MUC5BQ9HC84 5762 aaPredicted RBP0.38□□□□□ -2.35
SMN2-212ENST00000514914 KIF14Q15058 1648 aa0.38□□□□□ -2.35
SMN2-212ENST00000514914 HIVEP3Q5T1R4 2406 aa0.37□□□□□ -2.35
SMN2-212ENST00000514914 IQCF6A8MYZ5 107 aa0.37□□□□□ -2.35
SMN2-212ENST00000514914 IGSF10Q6WRI0 2623 aa0.36□□□□□ -2.35
SMN2-212ENST00000514914 PPLO60437 1756 aa0.36□□□□□ -2.35
SMN2-212ENST00000514914 KIF20BQ96Q89 1820 aa0.36□□□□□ -2.35
SMN2-212ENST00000514914 ANKRD36A6QL64 1941 aa0.35□□□□□ -2.35
SMN2-212ENST00000514914 MAST4O15021 2626 aa0.35□□□□□ -2.35
SMN2-212ENST00000514914 MDN1Q9NU22 5596 aa0.35□□□□□ -2.35
SMN2-212ENST00000514914 URB1O60287 2271 aaKnown RBP0.35□□□□□ -2.35
SMN2-212ENST00000514914 FMN2Q9NZ56 1722 aa0.35□□□□□ -2.35
SMN2-212ENST00000514914 CCDC18Q5T9S5 1454 aa0.35□□□□□ -2.35
SMN2-212ENST00000514914 MAGI2Q86UL8 1455 aa0.35□□□□□ -2.35
SMN2-212ENST00000514914 LRP1Q07954 4544 aaKnown RBP0.34□□□□□ -2.35
SMN2-212ENST00000514914 CEBPZOSA8MTT3 80 aa0.34□□□□□ -2.36
SMN2-212ENST00000514914 MRPL34Q9BQ48 92 aaKnown RBP0.34□□□□□ -2.36
SMN2-212ENST00000514914 APLNQ9ULZ1 77 aa0.34□□□□□ -2.36
SMN2-212ENST00000514914 NCOR1O75376 2440 aa0.34□□□□□ -2.36
SMN2-212ENST00000514914 SYNE1Q8NF91 8797 aaKnown RBP0.34□□□□□ -2.36
SMN2-212ENST00000514914 UBR1Q8IWV7 1749 aa0.33□□□□□ -2.36
SMN2-212ENST00000514914 COL14A1Q05707 1796 aaKnown RBP0.33□□□□□ -2.36
SMN2-212ENST00000514914 NDUFB1O75438 58 aa0.33□□□□□ -2.36
SMN2-212ENST00000514914 COX7BP24311 80 aa0.33□□□□□ -2.36
SMN2-212ENST00000514914 LRRC7Q96NW7 1537 aa0.33□□□□□ -2.36
SMN2-212ENST00000514914 LOC730098B7Z3J9 87 aa0.32□□□□□ -2.36
SMN2-212ENST00000514914 S100A13Q99584 98 aa0.32□□□□□ -2.36
SMN2-212ENST00000514914 MED14O60244 1454 aa0.32□□□□□ -2.36
SMN2-212ENST00000514914 WNK2Q9Y3S1 2297 aa0.32□□□□□ -2.36
SMN2-212ENST00000514914 FAT4Q6V0I7 4981 aa0.32□□□□□ -2.36
SMN2-212ENST00000514914 ABCA2Q9BZC7 2435 aa0.32□□□□□ -2.36
SMN2-212ENST00000514914 TENM4Q6N022 2769 aa0.31□□□□□ -2.36
SMN2-212ENST00000514914 GAFA1Q96PS6 74 aa0.31□□□□□ -2.36
SMN2-212ENST00000514914 GVINP1Q7Z2Y8 2422 aa0.3□□□□□ -2.36
SMN2-212ENST00000514914 QSER1Q2KHR3 1735 aa0.3□□□□□ -2.36
SMN2-212ENST00000514914 HRNRQ86YZ3 2850 aaPredicted RBP0.29□□□□□ -2.36
SMN2-212ENST00000514914 ADIRFQ15847 76 aa0.29□□□□□ -2.36
SMN2-212ENST00000514914 CSMD3Q7Z407 3707 aa0.29□□□□□ -2.36
SMN2-212ENST00000514914 URB2Q14146 1524 aaKnown RBP0.28□□□□□ -2.36
SMN2-212ENST00000514914 DMBT1Q9UGM3 2413 aaPredicted RBP0.28□□□□□ -2.36
SMN2-212ENST00000514914 SUPT6HQ7KZ85 1726 aaKnown RBP0.28□□□□□ -2.36
SMN2-212ENST00000514914 KLK9Q2XQG4 91 aa0.28□□□□□ -2.36
SMN2-212ENST00000514914 CDKN2A-AS1Q9UH64 79 aa0.28□□□□□ -2.36
SMN2-212ENST00000514914 UBR3Q6ZT12 1888 aa0.27□□□□□ -2.37
SMN2-212ENST00000514914 VWFP04275 2813 aa0.27□□□□□ -2.37
SMN2-212ENST00000514914 HEPN1Q6WQI6 88 aa0.27□□□□□ -2.37
SMN2-212ENST00000514914 COX6B2Q6YFQ2 88 aa0.27□□□□□ -2.37
SMN2-212ENST00000514914 ST20Q9HBF5 79 aa0.27□□□□□ -2.37
SMN2-212ENST00000514914 UBR5O95071 2799 aaPredicted RBP0.27□□□□□ -2.37
SMN2-212ENST00000514914 TDRG1Q3Y452 100 aa0.26□□□□□ -2.37
SMN2-212ENST00000514914 H1FX-AS1Q4G0G2 97 aa0.26□□□□□ -2.37
SMN2-212ENST00000514914 BCORQ6W2J9 1755 aa0.26□□□□□ -2.37
SMN2-212ENST00000514914 TMEM131LA2VDJ0 1609 aa0.25□□□□□ -2.37
SMN2-212ENST00000514914 TRAV21A0A0B4J279 112 aa0.25□□□□□ -2.37
SMN2-212ENST00000514914 ATP5EP2Q5VTU8 51 aa0.25□□□□□ -2.37
SMN2-212ENST00000514914 WFDC9Q8NEX5 89 aa0.25□□□□□ -2.37
SMN2-212ENST00000514914 MUC5ACP98088 5654 aa0.25□□□□□ -2.37
SMN2-212ENST00000514914 KMT2DO14686 5537 aa0.25□□□□□ -2.37
SMN2-212ENST00000514914 CHD6Q8TD26 2715 aa0.25□□□□□ -2.37
SMN2-212ENST00000514914 RGPD8O14715 1765 aaPredicted RBP0.24□□□□□ -2.37
SMN2-212ENST00000514914 RGPD5Q99666 1765 aa0.24□□□□□ -2.37
SMN2-212ENST00000514914 PREX1Q8TCU6 1659 aa0.24□□□□□ -2.37
SMN2-212ENST00000514914 SCRIBQ14160 1630 aa0.24□□□□□ -2.37
SMN2-212ENST00000514914 SPTA1P02549 2419 aa0.23□□□□□ -2.37
SMN2-212ENST00000514914 SPRR2DP22532 72 aa0.23□□□□□ -2.37
SMN2-212ENST00000514914 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.23□□□□□ -2.37
SMN2-212ENST00000514914 RGPD2P0DJD1 1756 aa0.22□□□□□ -2.37
SMN2-212ENST00000514914 DCAF1Q9Y4B6 1507 aa0.22□□□□□ -2.37
SMN2-212ENST00000514914 RGPD1P0DJD0 1748 aa0.21□□□□□ -2.38
SMN2-212ENST00000514914 CACNA1AO00555 2505 aa0.21□□□□□ -2.38
SMN2-212ENST00000514914 M0R2T5 61 aa0.21□□□□□ -2.38
SMN2-212ENST00000514914 PRM1P04553 51 aa0.21□□□□□ -2.38
SMN2-212ENST00000514914 CSPG4Q6UVK1 2322 aa0.21□□□□□ -2.38
SMN2-212ENST00000514914 CCDC88BA6NC98 1476 aa0.21□□□□□ -2.38
SMN2-212ENST00000514914 ABCC1P33527 1531 aa0.2□□□□□ -2.38
SMN2-212ENST00000514914 MAGI3Q5TCQ9 1506 aa0.2□□□□□ -2.38
SMN2-212ENST00000514914 TIAM2Q8IVF5 1701 aa0.2□□□□□ -2.38
SMN2-212ENST00000514914 KDM5DQ9BY66 1539 aa0.19□□□□□ -2.38
SMN2-212ENST00000514914 ARHGAP35Q9NRY4 1499 aa0.19□□□□□ -2.38
SMN2-212ENST00000514914 ERVK-7P63135 1459 aa0.18□□□□□ -2.38
SMN2-212ENST00000514914 HMGA1P17096 107 aaKnown RBP0.18□□□□□ -2.38
SMN2-212ENST00000514914 LTN1O94822 1766 aa0.18□□□□□ -2.38
SMN2-212ENST00000514914 CEP170BQ9Y4F5 1589 aaPredicted RBP0.18□□□□□ -2.38
SMN2-212ENST00000514914 CELSR1Q9NYQ6 3014 aa0.18□□□□□ -2.38
SMN2-212ENST00000514914 EP300Q09472 2414 aaPredicted RBP0.17□□□□□ -2.38
SMN2-212ENST00000514914 NCOA2Q15596 1464 aa0.17□□□□□ -2.38
SMN2-212ENST00000514914 IFI27P40305 119 aaPredicted RBP0.17□□□□□ -2.38
SMN2-212ENST00000514914 USP32Q8NFA0 1604 aa0.16□□□□□ -2.38
SMN2-212ENST00000514914 POLR1AO95602 1720 aaPredicted RBP0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms