RNA–Protein interactions for RNA: ENST00000514914.1

SMN2-212, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 2

Gene SMN2, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-212ENST00000514914 AEBP2Q6ZN18 517 aaPredicted RBP19.67■□□□□ 0.74
SMN2-212ENST00000514914 CHIC1Q5VXU3 224 aa18.47■□□□□ 0.55
SMN2-212ENST00000514914 SENP3Q9H4L4 574 aaPredicted RBP16.89■□□□□ 0.29
SMN2-212ENST00000514914 PHF23Q9BUL5 403 aaPredicted RBP16.58■□□□□ 0.24
SMN2-212ENST00000514914 FOXD1Q16676 465 aa15.73■□□□□ 0.11
SMN2-212ENST00000514914 POTEDQ86YR6 584 aa14.91□□□□□ -0.02
SMN2-212ENST00000514914 MSH5O43196 834 aa14.87□□□□□ -0.03
SMN2-212ENST00000514914 PLPPR3Q6T4P5 718 aa14.66□□□□□ -0.06
SMN2-212ENST00000514914 PIAS4Q8N2W9 510 aaPredicted RBP14.65□□□□□ -0.06
SMN2-212ENST00000514914 PPP6R1Q9UPN7 881 aa14.46□□□□□ -0.09
SMN2-212ENST00000514914 ADRA2BP18089 450 aa14.41□□□□□ -0.1
SMN2-212ENST00000514914 DMRT2Q9Y5R5 561 aa13.33□□□□□ -0.28
SMN2-212ENST00000514914 MAPK8IP2Q13387 824 aaPredicted RBP13.3□□□□□ -0.28
SMN2-212ENST00000514914 SCAF1Q9H7N4 1312 aaKnown RBP13.26□□□□□ -0.29
SMN2-212ENST00000514914 CACNB1Q02641 598 aaPredicted RBP12.89□□□□□ -0.35
SMN2-212ENST00000514914 PPP4R3CPQ6ZMV5 832 aa12.79□□□□□ -0.36
SMN2-212ENST00000514914 DCAF8L1A6NGE4 600 aa12.76□□□□□ -0.37
SMN2-212ENST00000514914 HOXD11P31277 338 aaPredicted RBP12.75□□□□□ -0.37
SMN2-212ENST00000514914 RNF39Q9H2S5 420 aa12.64□□□□□ -0.39
SMN2-212ENST00000514914 CNKSR2Q8WXI2 1034 aa12.63□□□□□ -0.39
SMN2-212ENST00000514914 KCNA4P22459 653 aa12.62□□□□□ -0.39
SMN2-212ENST00000514914 RNF216Q9NWF9 866 aaPredicted RBP12.58□□□□□ -0.4
SMN2-212ENST00000514914 EHMT2Q96KQ7 1210 aa12.49□□□□□ -0.41
SMN2-212ENST00000514914 C1QBPQ07021 282 aaKnown RBP12.46□□□□□ -0.41
SMN2-212ENST00000514914 DNAJC5BQ9UF47 199 aa12.4□□□□□ -0.42
SMN2-212ENST00000514914 NCBP3Q53F19 620 aaKnown RBP12.32□□□□□ -0.44
SMN2-212ENST00000514914 SLC4A1APQ9BWU0 796 aaKnown RBP12.24□□□□□ -0.45
SMN2-212ENST00000514914 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.12□□□□□ -0.47
SMN2-212ENST00000514914 CSRNP3Q8WYN3 585 aa12.05□□□□□ -0.48
SMN2-212ENST00000514914 NPM3O75607 178 aaKnown RBP12.04□□□□□ -0.48
SMN2-212ENST00000514914 U3KPZ7 1027 aaPredicted RBP11.84□□□□□ -0.51
SMN2-212ENST00000514914 CAPN15O75808 1086 aa11.73□□□□□ -0.53
SMN2-212ENST00000514914 DSG3P32926 999 aa11.73□□□□□ -0.53
SMN2-212ENST00000514914 SPINK5Q9NQ38 1064 aaPredicted RBP11.73□□□□□ -0.53
SMN2-212ENST00000514914 POTEHQ6S545 545 aa11.64□□□□□ -0.55
SMN2-212ENST00000514914 ZBTB22O15209 634 aa11.55□□□□□ -0.56
SMN2-212ENST00000514914 SLC4A2P04920 1241 aa11.55□□□□□ -0.56
SMN2-212ENST00000514914 APLP2Q06481 763 aa11.55□□□□□ -0.56
SMN2-212ENST00000514914 FOXD4L1Q9NU39 408 aa11.55□□□□□ -0.56
SMN2-212ENST00000514914 ZNF219Q9P2Y4 722 aaPredicted RBP11.5□□□□□ -0.57
SMN2-212ENST00000514914 TRHP20396 242 aaPredicted RBP11.48□□□□□ -0.57
SMN2-212ENST00000514914 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.46□□□□□ -0.57
SMN2-212ENST00000514914 HNRNPUL2Q1KMD3 747 aaKnown RBP11.46□□□□□ -0.57
SMN2-212ENST00000514914 ABCB7O75027 752 aa11.43□□□□□ -0.58
SMN2-212ENST00000514914 SAMD1Q6SPF0 538 aaPredicted RBP11.37□□□□□ -0.59
SMN2-212ENST00000514914 RBM42Q9BTD8 480 aaKnown RBP11.26□□□□□ -0.61
SMN2-212ENST00000514914 ATXN8OSP0DMR3 200 aa11.19□□□□□ -0.62
SMN2-212ENST00000514914 MYCNP04198 464 aaPredicted RBP11.18□□□□□ -0.62
SMN2-212ENST00000514914 AMER1Q5JTC6 1135 aaPredicted RBP11.12□□□□□ -0.63
SMN2-212ENST00000514914 POLA2Q14181 598 aa11.11□□□□□ -0.63
SMN2-212ENST00000514914 CHRDL2Q6WN34 429 aa11.07□□□□□ -0.64
SMN2-212ENST00000514914 SLC24A1O60721 1099 aa10.95□□□□□ -0.66
SMN2-212ENST00000514914 ZBTB12Q9Y330 459 aaPredicted RBP10.93□□□□□ -0.66
SMN2-212ENST00000514914 AKT1S1Q96B36 256 aa10.92□□□□□ -0.66
SMN2-212ENST00000514914 RTN4Q9NQC3 1192 aaKnown RBP10.92□□□□□ -0.66
SMN2-212ENST00000514914 FKBP8Q14318 412 aa10.91□□□□□ -0.66
SMN2-212ENST00000514914 ATF5Q9Y2D1 282 aaPredicted RBP10.87□□□□□ -0.67
SMN2-212ENST00000514914 SP7Q8TDD2 431 aaPredicted RBP10.8□□□□□ -0.68
SMN2-212ENST00000514914 REM2Q8IYK8 340 aaPredicted RBP10.78□□□□□ -0.68
SMN2-212ENST00000514914 OSCARQ8IYS5 282 aa10.78□□□□□ -0.68
SMN2-212ENST00000514914 PIP4P2Q8N4L2 257 aa10.74□□□□□ -0.69
SMN2-212ENST00000514914 PITPNM1O00562 1244 aa10.69□□□□□ -0.7
SMN2-212ENST00000514914 FXR2P51116 673 aaKnown RBP eCLIP10.64□□□□□ -0.71
SMN2-212ENST00000514914 HAX1O00165 279 aa10.61□□□□□ -0.71
SMN2-212ENST00000514914 SPDYE2BA6NHP3 402 aa10.55□□□□□ -0.72
SMN2-212ENST00000514914 SPDYE6P0CI01 402 aa10.55□□□□□ -0.72
SMN2-212ENST00000514914 SPDYE2Q495Y8 402 aa10.55□□□□□ -0.72
SMN2-212ENST00000514914 FBXO3Q9UK99 471 aa10.54□□□□□ -0.72
SMN2-212ENST00000514914 FBLN2P98095 1184 aa10.52□□□□□ -0.73
SMN2-212ENST00000514914 EVX2Q03828 476 aa10.43□□□□□ -0.74
SMN2-212ENST00000514914 SPDYE1Q8NFV5 336 aaPredicted RBP10.42□□□□□ -0.74
SMN2-212ENST00000514914 PRKAR2AP13861 404 aaKnown RBP10.4□□□□□ -0.74
SMN2-212ENST00000514914 CLEC11AQ9Y240 323 aa10.39□□□□□ -0.75
SMN2-212ENST00000514914 SPDYE4A6NLX3 237 aa10.38□□□□□ -0.75
SMN2-212ENST00000514914 MKRN4PQ13434 485 aaPredicted RBP10.38□□□□□ -0.75
SMN2-212ENST00000514914 SSUH2Q9Y2M2 353 aa10.38□□□□□ -0.75
SMN2-212ENST00000514914 ZNF692Q9BU19 519 aaPredicted RBP10.35□□□□□ -0.75
SMN2-212ENST00000514914 C19orf67A6NJJ6 358 aa10.32□□□□□ -0.76
SMN2-212ENST00000514914 PROM2Q8N271 834 aa10.25□□□□□ -0.77
SMN2-212ENST00000514914 VASPP50552 380 aaPredicted RBP10.23□□□□□ -0.77
SMN2-212ENST00000514914 GABBR2O75899 941 aa10.21□□□□□ -0.77
SMN2-212ENST00000514914 CHADLQ6NUI6 762 aa10.21□□□□□ -0.77
SMN2-212ENST00000514914 PRR29P0C7W0 189 aa10.19□□□□□ -0.78
SMN2-212ENST00000514914 PABPN1Q86U42 306 aaKnown RBP eCLIP10.19□□□□□ -0.78
SMN2-212ENST00000514914 PLCB2Q00722 1185 aa10.16□□□□□ -0.78
SMN2-212ENST00000514914 LHX8Q68G74 356 aa10.11□□□□□ -0.79
SMN2-212ENST00000514914 DCAF8L2P0C7V8 631 aa10.09□□□□□ -0.79
SMN2-212ENST00000514914 CD44P16070 742 aaKnown RBP10.07□□□□□ -0.8
SMN2-212ENST00000514914 IFNLR1Q8IU57 520 aaPredicted RBP10.07□□□□□ -0.8
SMN2-212ENST00000514914 FARP1Q9Y4F1 1045 aaPredicted RBP10.05□□□□□ -0.8
SMN2-212ENST00000514914 CLCN6P51797 869 aa10.03□□□□□ -0.8
SMN2-212ENST00000514914 HAP1P54257 671 aaPredicted RBP10.02□□□□□ -0.81
SMN2-212ENST00000514914 STAG3Q9UJ98 1225 aa10.02□□□□□ -0.81
SMN2-212ENST00000514914 KLHL34Q8N239 644 aa9.99□□□□□ -0.81
SMN2-212ENST00000514914 POTEIP0CG38 1075 aa9.98□□□□□ -0.81
SMN2-212ENST00000514914 SPOCK2Q92563 424 aa9.98□□□□□ -0.81
SMN2-212ENST00000514914 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.98□□□□□ -0.81
SMN2-212ENST00000514914 PKD2Q13563 968 aa9.96□□□□□ -0.82
SMN2-212ENST00000514914 VSIG10Q8N0Z9 540 aa9.96□□□□□ -0.82
SMN2-212ENST00000514914 BCANQ96GW7 911 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms