RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 HIVEP1P15822 2718 aa-0.48□□□□□ -2.49
NEDD4-211ENST00000514893 ANKRD36A6QL64 1941 aa-0.48□□□□□ -2.49
NEDD4-211ENST00000514893 TRANK1O15050 2925 aa-0.48□□□□□ -2.49
NEDD4-211ENST00000514893 MLH3Q9UHC1 1453 aa-0.48□□□□□ -2.49
NEDD4-211ENST00000514893 SLIT1O75093 1534 aa-0.48□□□□□ -2.49
NEDD4-211ENST00000514893 TRBV7-7A0A0K0K1E9 115 aa-0.49□□□□□ -2.49
NEDD4-211ENST00000514893 C20orf202A1L168 122 aa-0.49□□□□□ -2.49
NEDD4-211ENST00000514893 LINC00587B1AMM8 73 aa-0.49□□□□□ -2.49
NEDD4-211ENST00000514893 CCL22O00626 93 aa-0.49□□□□□ -2.49
NEDD4-211ENST00000514893 PSENENQ9NZ42 101 aa-0.49□□□□□ -2.49
NEDD4-211ENST00000514893 ABCC5O15440 1437 aa-0.49□□□□□ -2.49
NEDD4-211ENST00000514893 LAMA5O15230 3695 aa-0.5□□□□□ -2.49
NEDD4-211ENST00000514893 TRBV25-1A0A075B6N4 114 aa-0.5□□□□□ -2.49
NEDD4-211ENST00000514893 NDUFC1O43677 76 aa-0.5□□□□□ -2.49
NEDD4-211ENST00000514893 SARNPP82979 210 aaKnown RBP-0.5□□□□□ -2.49
NEDD4-211ENST00000514893 LELP1Q5T871 98 aa-0.5□□□□□ -2.49
NEDD4-211ENST00000514893 C2orf88Q9BSF0 95 aa-0.5□□□□□ -2.49
NEDD4-211ENST00000514893 EPG5Q9HCE0 2579 aa-0.5□□□□□ -2.49
NEDD4-211ENST00000514893 SHPRHQ149N8 1683 aa-0.5□□□□□ -2.49
NEDD4-211ENST00000514893 S100A10P60903 97 aa-0.51□□□□□ -2.49
NEDD4-211ENST00000514893 BCORQ6W2J9 1755 aa-0.51□□□□□ -2.49
NEDD4-211ENST00000514893 WFDC13Q8IUB5 93 aa-0.51□□□□□ -2.49
NEDD4-211ENST00000514893 KIF20BQ96Q89 1820 aa-0.51□□□□□ -2.49
NEDD4-211ENST00000514893 KIAA1551Q9HCM1 1747 aa-0.51□□□□□ -2.49
NEDD4-211ENST00000514893 CDKN2A-AS1Q9UH64 79 aa-0.51□□□□□ -2.49
NEDD4-211ENST00000514893 COL4A6Q14031 1691 aa-0.52□□□□□ -2.49
NEDD4-211ENST00000514893 FAM135AQ9P2D6 1515 aa-0.52□□□□□ -2.49
NEDD4-211ENST00000514893 KRTAP20-2Q3LI61 65 aa-0.52□□□□□ -2.49
NEDD4-211ENST00000514893 ETDBQ3ZM63 59 aa-0.52□□□□□ -2.49
NEDD4-211ENST00000514893 COL5A1-AS1Q5SY13 56 aa-0.52□□□□□ -2.49
NEDD4-211ENST00000514893 PCLOQ9Y6V0 5065 aa-0.52□□□□□ -2.49
NEDD4-211ENST00000514893 RGPD2P0DJD1 1756 aa-0.52□□□□□ -2.49
NEDD4-211ENST00000514893 USP9YO00507 2555 aaPredicted RBP-0.52□□□□□ -2.49
NEDD4-211ENST00000514893 CLIP1P30622 1438 aa-0.53□□□□□ -2.49
NEDD4-211ENST00000514893 UQCRHLA0A096LP55 91 aa-0.53□□□□□ -2.49
NEDD4-211ENST00000514893 LEPROTL1O95214 131 aa-0.53□□□□□ -2.49
NEDD4-211ENST00000514893 SPRR2EP22531 72 aa-0.53□□□□□ -2.49
NEDD4-211ENST00000514893 TRGV9Q99603 122 aa-0.53□□□□□ -2.49
NEDD4-211ENST00000514893 RAPGEF2Q9Y4G8 1499 aa-0.54□□□□□ -2.5
NEDD4-211ENST00000514893 HERC1Q15751 4861 aa-0.54□□□□□ -2.5
NEDD4-211ENST00000514893 ANKRD36BQ8N2N9 1353 aa-0.54□□□□□ -2.5
NEDD4-211ENST00000514893 PKD1L3Q7Z443 1732 aa-0.54□□□□□ -2.5
NEDD4-211ENST00000514893 D6R8Y8 96 aa-0.54□□□□□ -2.5
NEDD4-211ENST00000514893 ATOX1O00244 68 aa-0.54□□□□□ -2.5
NEDD4-211ENST00000514893 FAUP35544 74 aaKnown RBP-0.54□□□□□ -2.5
NEDD4-211ENST00000514893 ZNF720Q7Z2F6 126 aa-0.54□□□□□ -2.5
NEDD4-211ENST00000514893 MUSTN1Q8IVN3 82 aa-0.54□□□□□ -2.5
NEDD4-211ENST00000514893 HIGD1BQ9P298 99 aa-0.54□□□□□ -2.5
NEDD4-211ENST00000514893 NBPF19A0A087WUL8 3843 aa-0.54□□□□□ -2.5
NEDD4-211ENST00000514893 ABCC2Q92887 1545 aa-0.54□□□□□ -2.5
NEDD4-211ENST00000514893 HECTD1Q9ULT8 2610 aa-0.54□□□□□ -2.5
NEDD4-211ENST00000514893 TACC2O95359 2948 aa-0.54□□□□□ -2.5
NEDD4-211ENST00000514893 NCOA3Q9Y6Q9 1424 aa-0.55□□□□□ -2.5
NEDD4-211ENST00000514893 KMT2CQ8NEZ4 4911 aaKnown RBP-0.55□□□□□ -2.5
NEDD4-211ENST00000514893 HTTP42858 3142 aa-0.55□□□□□ -2.5
NEDD4-211ENST00000514893 ITPR3Q14573 2671 aa-0.55□□□□□ -2.5
NEDD4-211ENST00000514893 MT-ATP8P03928 68 aa-0.55□□□□□ -2.5
NEDD4-211ENST00000514893 IGLC2P0DOY2 106 aa-0.55□□□□□ -2.5
NEDD4-211ENST00000514893 IGLC3P0DOY3 106 aa-0.55□□□□□ -2.5
NEDD4-211ENST00000514893 SAMD9Q5K651 1589 aa-0.55□□□□□ -2.5
NEDD4-211ENST00000514893 ZFYVE16Q7Z3T8 1539 aa-0.55□□□□□ -2.5
NEDD4-211ENST00000514893 CLTCQ00610 1675 aaKnown RBP-0.56□□□□□ -2.5
NEDD4-211ENST00000514893 TNRC18O15417 2968 aaPredicted RBP-0.56□□□□□ -2.5
NEDD4-211ENST00000514893 NBASA2RRP1 2371 aa-0.56□□□□□ -2.5
NEDD4-211ENST00000514893 ADAMTS12P58397 1594 aa-0.56□□□□□ -2.5
NEDD4-211ENST00000514893 F8WEM9 126 aa-0.56□□□□□ -2.5
NEDD4-211ENST00000514893 H7BZZ5 65 aa-0.56□□□□□ -2.5
NEDD4-211ENST00000514893 MPC2O95563 127 aa-0.56□□□□□ -2.5
NEDD4-211ENST00000514893 SERP2Q8N6R1 65 aa-0.56□□□□□ -2.5
NEDD4-211ENST00000514893 CRYBG1Q9Y4K1 1723 aa-0.56□□□□□ -2.5
NEDD4-211ENST00000514893 FYCO1Q9BQS8 1478 aa-0.56□□□□□ -2.5
NEDD4-211ENST00000514893 NRXN1Q9ULB1 1477 aa-0.56□□□□□ -2.5
NEDD4-211ENST00000514893 PRDM15P57071 1507 aaPredicted RBP-0.57□□□□□ -2.5
NEDD4-211ENST00000514893 H3BNG1 76 aa-0.57□□□□□ -2.5
NEDD4-211ENST00000514893 RPL38P63173 70 aaKnown RBP-0.57□□□□□ -2.5
NEDD4-211ENST00000514893 PREX1Q8TCU6 1659 aa-0.57□□□□□ -2.5
NEDD4-211ENST00000514893 PTPN23Q9H3S7 1636 aa-0.57□□□□□ -2.5
NEDD4-211ENST00000514893 REV3LO60673 3130 aa-0.58□□□□□ -2.5
NEDD4-211ENST00000514893 KNL1Q8NG31 2342 aa-0.58□□□□□ -2.5
NEDD4-211ENST00000514893 PKD1P98161 4303 aa-0.58□□□□□ -2.5
NEDD4-211ENST00000514893 SPG11Q96JI7 2443 aa-0.58□□□□□ -2.5
NEDD4-211ENST00000514893 NMSQ5H8A3 153 aa-0.58□□□□□ -2.5
NEDD4-211ENST00000514893 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.58□□□□□ -2.5
NEDD4-211ENST00000514893 C4AP0C0L4 1744 aa-0.58□□□□□ -2.5
NEDD4-211ENST00000514893 C4BP0C0L5 1744 aa-0.58□□□□□ -2.5
NEDD4-211ENST00000514893 UBR3Q6ZT12 1888 aa-0.58□□□□□ -2.5
NEDD4-211ENST00000514893 LRRC7Q96NW7 1537 aa-0.59□□□□□ -2.5
NEDD4-211ENST00000514893 ANKRD11Q6UB99 2663 aaPredicted RBP-0.59□□□□□ -2.5
NEDD4-211ENST00000514893 CICQ96RK0 1608 aaPredicted RBP-0.59□□□□□ -2.5
NEDD4-211ENST00000514893 S100PP25815 95 aa-0.59□□□□□ -2.5
NEDD4-211ENST00000514893 TCEAL7Q9BRU2 100 aa-0.59□□□□□ -2.5
NEDD4-211ENST00000514893 FASNP49327 2511 aaKnown RBP-0.59□□□□□ -2.5
NEDD4-211ENST00000514893 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.59□□□□□ -2.5
NEDD4-211ENST00000514893 SONP18583 2426 aaKnown RBP-0.59□□□□□ -2.5
NEDD4-211ENST00000514893 DMXL1Q9Y485 3027 aa-0.6□□□□□ -2.51
NEDD4-211ENST00000514893 QSER1Q2KHR3 1735 aa-0.6□□□□□ -2.51
NEDD4-211ENST00000514893 TROQ12816 1431 aaPredicted RBP-0.6□□□□□ -2.51
NEDD4-211ENST00000514893 ATP6V1G2-DDX39BF2Z307 99 aa-0.6□□□□□ -2.51
NEDD4-211ENST00000514893 NDUFA3O95167 84 aa-0.6□□□□□ -2.51
NEDD4-211ENST00000514893 LINC00032P0C843 101 aa-0.6□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms