RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 AKAP13Q12802 2813 aa-0.22□□□□□ -2.44
TRAPPC11-210ENST00000513600 NLRP1Q9C000 1473 aa-0.22□□□□□ -2.45
TRAPPC11-210ENST00000513600 PRDM15P57071 1507 aaPredicted RBP-0.23□□□□□ -2.45
TRAPPC11-210ENST00000513600 CHD1O14646 1710 aa-0.23□□□□□ -2.45
TRAPPC11-210ENST00000513600 TEX15Q9BXT5 2789 aa-0.23□□□□□ -2.45
TRAPPC11-210ENST00000513600 TRAV30A0A087WSZ9 112 aa-0.23□□□□□ -2.45
TRAPPC11-210ENST00000513600 A0A0G2JND7 137 aa-0.23□□□□□ -2.45
TRAPPC11-210ENST00000513600 H0Y9P7 68 aa-0.23□□□□□ -2.45
TRAPPC11-210ENST00000513600 H7BZZ5 65 aa-0.23□□□□□ -2.45
TRAPPC11-210ENST00000513600 M0R2T5 61 aa-0.23□□□□□ -2.45
TRAPPC11-210ENST00000513600 MPC2O95563 127 aa-0.23□□□□□ -2.45
TRAPPC11-210ENST00000513600 KLK9Q2XQG4 91 aa-0.23□□□□□ -2.45
TRAPPC11-210ENST00000513600 PSMG4Q5JS54 123 aa-0.23□□□□□ -2.45
TRAPPC11-210ENST00000513600 C6orf201Q7Z4U5 140 aa-0.23□□□□□ -2.45
TRAPPC11-210ENST00000513600 C14orf144Q96I85 54 aa-0.23□□□□□ -2.45
TRAPPC11-210ENST00000513600 TRGV9Q99603 122 aa-0.23□□□□□ -2.45
TRAPPC11-210ENST00000513600 TCEAL7Q9BRU2 100 aa-0.23□□□□□ -2.45
TRAPPC11-210ENST00000513600 RYR2Q92736 4967 aa-0.23□□□□□ -2.45
TRAPPC11-210ENST00000513600 EDC4Q6P2E9 1401 aaKnown RBP-0.23□□□□□ -2.45
TRAPPC11-210ENST00000513600 ITPR1Q14643 2758 aa-0.23□□□□□ -2.45
TRAPPC11-210ENST00000513600 LAMA5O15230 3695 aa-0.24□□□□□ -2.45
TRAPPC11-210ENST00000513600 ANKRD36A6QL64 1941 aa-0.24□□□□□ -2.45
TRAPPC11-210ENST00000513600 CPSF4LA6NMK7 179 aaKnown RBP-0.24□□□□□ -2.45
TRAPPC11-210ENST00000513600 CRIPTQ9P021 101 aa-0.24□□□□□ -2.45
TRAPPC11-210ENST00000513600 APLNQ9ULZ1 77 aa-0.24□□□□□ -2.45
TRAPPC11-210ENST00000513600 MLH3Q9UHC1 1453 aa-0.24□□□□□ -2.45
TRAPPC11-210ENST00000513600 MGAM2Q2M2H8 2515 aa-0.24□□□□□ -2.45
TRAPPC11-210ENST00000513600 COL6A5A8TX70 2615 aa-0.24□□□□□ -2.45
TRAPPC11-210ENST00000513600 STARD9Q9P2P6 4700 aa-0.24□□□□□ -2.45
TRAPPC11-210ENST00000513600 BIRC6Q9NR09 4857 aa-0.24□□□□□ -2.45
TRAPPC11-210ENST00000513600 ABCA3Q99758 1704 aa-0.24□□□□□ -2.45
TRAPPC11-210ENST00000513600 MYO18BQ8IUG5 2567 aa-0.25□□□□□ -2.45
TRAPPC11-210ENST00000513600 ITPR2Q14571 2701 aa-0.25□□□□□ -2.45
TRAPPC11-210ENST00000513600 ATOX1O00244 68 aa-0.25□□□□□ -2.45
TRAPPC11-210ENST00000513600 MT-ATP8P03928 68 aa-0.25□□□□□ -2.45
TRAPPC11-210ENST00000513600 UQCRHP07919 91 aa-0.25□□□□□ -2.45
TRAPPC11-210ENST00000513600 DEFB107AQ8IZN7 70 aa-0.25□□□□□ -2.45
TRAPPC11-210ENST00000513600 SERP2Q8N6R1 65 aa-0.25□□□□□ -2.45
TRAPPC11-210ENST00000513600 NKTRP30414 1462 aaKnown RBP-0.25□□□□□ -2.45
TRAPPC11-210ENST00000513600 IQSEC2Q5JU85 1478 aa-0.25□□□□□ -2.45
TRAPPC11-210ENST00000513600 FMN2Q9NZ56 1722 aa-0.25□□□□□ -2.45
TRAPPC11-210ENST00000513600 GCN1Q92616 2671 aaKnown RBP-0.26□□□□□ -2.45
TRAPPC11-210ENST00000513600 SONP18583 2426 aaKnown RBP-0.26□□□□□ -2.45
TRAPPC11-210ENST00000513600 PAPPA2Q9BXP8 1791 aa-0.26□□□□□ -2.45
TRAPPC11-210ENST00000513600 ABCC2Q92887 1545 aa-0.26□□□□□ -2.45
TRAPPC11-210ENST00000513600 TEX14Q8IWB6 1497 aa-0.26□□□□□ -2.45
TRAPPC11-210ENST00000513600 ANKRD36BQ8N2N9 1353 aa-0.26□□□□□ -2.45
TRAPPC11-210ENST00000513600 NBPF19A0A087WUL8 3843 aa-0.26□□□□□ -2.45
TRAPPC11-210ENST00000513600 I3L3M4 83 aa-0.26□□□□□ -2.45
TRAPPC11-210ENST00000513600 ARMS2P0C7Q2 107 aa-0.26□□□□□ -2.45
TRAPPC11-210ENST00000513600 LINC00032P0C843 101 aa-0.26□□□□□ -2.45
TRAPPC11-210ENST00000513600 ASIPP42127 132 aa-0.26□□□□□ -2.45
TRAPPC11-210ENST00000513600 S100A10P60903 97 aa-0.26□□□□□ -2.45
TRAPPC11-210ENST00000513600 GNGT1P63211 74 aa-0.26□□□□□ -2.45
TRAPPC11-210ENST00000513600 HMGN3Q15651 99 aa-0.26□□□□□ -2.45
TRAPPC11-210ENST00000513600 PMCHL2Q9BQD1 86 aa-0.26□□□□□ -2.45
TRAPPC11-210ENST00000513600 AP4S1Q9Y587 144 aa-0.26□□□□□ -2.45
TRAPPC11-210ENST00000513600 NBEAL2Q6ZNJ1 2754 aa-0.26□□□□□ -2.45
TRAPPC11-210ENST00000513600 TRANK1O15050 2925 aa-0.27□□□□□ -2.45
TRAPPC11-210ENST00000513600 PKHD1P08F94 4074 aa-0.27□□□□□ -2.45
TRAPPC11-210ENST00000513600 MARF1Q9Y4F3 1742 aaKnown RBP-0.27□□□□□ -2.45
TRAPPC11-210ENST00000513600 ANKRD11Q6UB99 2663 aaPredicted RBP-0.27□□□□□ -2.45
TRAPPC11-210ENST00000513600 SLIT1O75093 1534 aa-0.27□□□□□ -2.45
TRAPPC11-210ENST00000513600 RAPGEF2Q9Y4G8 1499 aa-0.27□□□□□ -2.45
TRAPPC11-210ENST00000513600 ABCA13Q86UQ4 5058 aa-0.27□□□□□ -2.45
TRAPPC11-210ENST00000513600 ATP6V1G2-DDX39BF2Z307 99 aa-0.27□□□□□ -2.45
TRAPPC11-210ENST00000513600 RBP2P50120 134 aa-0.27□□□□□ -2.45
TRAPPC11-210ENST00000513600 ALKAL2Q6UX46 152 aa-0.27□□□□□ -2.45
TRAPPC11-210ENST00000513600 ACBD7Q8N6N7 88 aa-0.27□□□□□ -2.45
TRAPPC11-210ENST00000513600 CEP295Q9C0D2 2601 aa-0.27□□□□□ -2.45
TRAPPC11-210ENST00000513600 LRRC37AA6NMS7 1700 aa-0.27□□□□□ -2.45
TRAPPC11-210ENST00000513600 TARBP1Q13395 1621 aaKnown RBP-0.27□□□□□ -2.45
TRAPPC11-210ENST00000513600 UTP20O75691 2785 aaKnown RBP-0.28□□□□□ -2.45
TRAPPC11-210ENST00000513600 CFAP46Q8IYW2 2715 aa-0.28□□□□□ -2.45
TRAPPC11-210ENST00000513600 FYCO1Q9BQS8 1478 aa-0.28□□□□□ -2.45
TRAPPC11-210ENST00000513600 NRXN1Q9ULB1 1477 aa-0.28□□□□□ -2.45
TRAPPC11-210ENST00000513600 MTORP42345 2549 aa-0.28□□□□□ -2.45
TRAPPC11-210ENST00000513600 FLGP20930 4061 aaPredicted RBP-0.28□□□□□ -2.45
TRAPPC11-210ENST00000513600 H1FX-AS1Q4G0G2 97 aa-0.28□□□□□ -2.45
TRAPPC11-210ENST00000513600 DPY30Q9C005 99 aa-0.28□□□□□ -2.45
TRAPPC11-210ENST00000513600 KNDC1Q76NI1 1749 aa-0.28□□□□□ -2.45
TRAPPC11-210ENST00000513600 SHPRHQ149N8 1683 aa-0.28□□□□□ -2.45
TRAPPC11-210ENST00000513600 PEG3Q9GZU2 1588 aa-0.28□□□□□ -2.45
TRAPPC11-210ENST00000513600 COL12A1Q99715 3063 aa-0.29□□□□□ -2.46
TRAPPC11-210ENST00000513600 CNTLNQ9NXG0 1405 aa-0.29□□□□□ -2.46
TRAPPC11-210ENST00000513600 TACC2O95359 2948 aa-0.29□□□□□ -2.46
TRAPPC11-210ENST00000513600 KIAA1551Q9HCM1 1747 aa-0.29□□□□□ -2.46
TRAPPC11-210ENST00000513600 CCL22O00626 93 aa-0.29□□□□□ -2.46
TRAPPC11-210ENST00000513600 ZNF720Q7Z2F6 126 aa-0.29□□□□□ -2.46
TRAPPC11-210ENST00000513600 MRPL34Q9BQ48 92 aaKnown RBP-0.29□□□□□ -2.46
TRAPPC11-210ENST00000513600 SAMD9Q5K651 1589 aa-0.29□□□□□ -2.46
TRAPPC11-210ENST00000513600 LAMA2P24043 3122 aaKnown RBP-0.29□□□□□ -2.46
TRAPPC11-210ENST00000513600 UQCRHLA0A096LP55 91 aa-0.3□□□□□ -2.46
TRAPPC11-210ENST00000513600 TRBV7-7A0A0K0K1E9 115 aa-0.3□□□□□ -2.46
TRAPPC11-210ENST00000513600 SPTY2D1-AS1A0A0U1RR47 76 aa-0.3□□□□□ -2.46
TRAPPC11-210ENST00000513600 TNRC18O15417 2968 aaPredicted RBP-0.3□□□□□ -2.46
TRAPPC11-210ENST00000513600 DEFB135Q30KP9 77 aa-0.3□□□□□ -2.46
TRAPPC11-210ENST00000513600 ETDBQ3ZM63 59 aa-0.3□□□□□ -2.46
TRAPPC11-210ENST00000513600 COL5A1-AS1Q5SY13 56 aa-0.3□□□□□ -2.46
TRAPPC11-210ENST00000513600 PSENENQ9NZ42 101 aa-0.3□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms