RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 LINC00526Q96FQ7 95 aa5.37□□□□□ -1.55
HTT-209ENST00000512068 SND1-IT1Q9HBX3 110 aa5.37□□□□□ -1.55
HTT-209ENST00000512068 TRAV13-2A0A0B4J235 113 aa5.36□□□□□ -1.55
HTT-209ENST00000512068 USP17L23D6RBM5 183 aa5.36□□□□□ -1.55
HTT-209ENST00000512068 H7C2G1 150 aa5.36□□□□□ -1.55
HTT-209ENST00000512068 SYCNQ0VAF6 134 aa5.36□□□□□ -1.55
HTT-209ENST00000512068 GTF2H5Q6ZYL4 71 aa5.36□□□□□ -1.55
HTT-209ENST00000512068 C15orf56Q8N910 161 aa5.36□□□□□ -1.55
HTT-209ENST00000512068 CARD19Q96LW7 228 aa5.36□□□□□ -1.55
HTT-209ENST00000512068 A0A1W2PPM0 123 aa5.35□□□□□ -1.55
HTT-209ENST00000512068 C3orf84H3BNL1 204 aa5.35□□□□□ -1.55
HTT-209ENST00000512068 COX6CP09669 75 aa5.35□□□□□ -1.55
HTT-209ENST00000512068 SCGB1C2P0DMR2 95 aa5.35□□□□□ -1.55
HTT-209ENST00000512068 RPL13AP40429 203 aaKnown RBP5.35□□□□□ -1.55
HTT-209ENST00000512068 NAA38Q9BRA0 125 aaKnown RBP5.35□□□□□ -1.55
HTT-209ENST00000512068 DNHD1Q96M86 4753 aa5.34□□□□□ -1.55
HTT-209ENST00000512068 LOC107984156A0A0G2JMH3 177 aa5.34□□□□□ -1.55
HTT-209ENST00000512068 GAGE10A6NGK3 116 aa5.34□□□□□ -1.55
HTT-209ENST00000512068 LY6G6CO95867 125 aa5.34□□□□□ -1.55
HTT-209ENST00000512068 C9orf116Q5BN46 136 aaPredicted RBP5.34□□□□□ -1.55
HTT-209ENST00000512068 C10orf25Q5T742 122 aa5.34□□□□□ -1.55
HTT-209ENST00000512068 Q6ZRU5 148 aa5.34□□□□□ -1.55
HTT-209ENST00000512068 ARL17AQ8IVW1 177 aa5.34□□□□□ -1.55
HTT-209ENST00000512068 C6orf48Q9UBA6 75 aa5.34□□□□□ -1.55
HTT-209ENST00000512068 SPCS1Q9Y6A9 102 aa5.34□□□□□ -1.55
HTT-209ENST00000512068 COL7A1Q02388 2944 aa5.34□□□□□ -1.55
HTT-209ENST00000512068 M0R2N4 97 aa5.33□□□□□ -1.56
HTT-209ENST00000512068 LECT2O14960 151 aa5.33□□□□□ -1.56
HTT-209ENST00000512068 TSPAN13O95857 204 aa5.33□□□□□ -1.56
HTT-209ENST00000512068 LCE5AQ5TCM9 118 aa5.33□□□□□ -1.56
HTT-209ENST00000512068 SOSTDC1Q6X4U4 206 aa5.33□□□□□ -1.56
HTT-209ENST00000512068 OR13C6PQ8NH95 151 aa5.33□□□□□ -1.56
HTT-209ENST00000512068 PKIGQ9Y2B9 76 aa5.33□□□□□ -1.56
HTT-209ENST00000512068 NDUFC2-KCTD14E9PQ53 114 aa5.32□□□□□ -1.56
HTT-209ENST00000512068 NDUFC2O95298 119 aa5.32□□□□□ -1.56
HTT-209ENST00000512068 SLPIP03973 132 aa5.32□□□□□ -1.56
HTT-209ENST00000512068 RPL18AQ02543 176 aaKnown RBP5.32□□□□□ -1.56
HTT-209ENST00000512068 CASC10Q5T4H9 136 aa5.32□□□□□ -1.56
HTT-209ENST00000512068 KRTAP1-5Q9BYS1 174 aa5.32□□□□□ -1.56
HTT-209ENST00000512068 K7EP34 96 aa5.31□□□□□ -1.56
HTT-209ENST00000512068 GAGE2EQ4V326 116 aa5.31□□□□□ -1.56
HTT-209ENST00000512068 S100A7L2Q5SY68 101 aa5.31□□□□□ -1.56
HTT-209ENST00000512068 GAGE2DQ9UEU5 116 aa5.31□□□□□ -1.56
HTT-209ENST00000512068 MEGF8Q7Z7M0 2845 aa5.3□□□□□ -1.56
HTT-209ENST00000512068 LOC107984640A0A0U1RRK4 108 aa5.3□□□□□ -1.56
HTT-209ENST00000512068 UBE2V1Q13404 147 aa5.3□□□□□ -1.56
HTT-209ENST00000512068 KRTAP4-7Q9BYR0 210 aa5.3□□□□□ -1.56
HTT-209ENST00000512068 CBY1Q9Y3M2 126 aa5.3□□□□□ -1.56
HTT-209ENST00000512068 FBN3Q75N90 2809 aa5.29□□□□□ -1.56
HTT-209ENST00000512068 PRKDCP78527 4128 aaKnown RBP5.29□□□□□ -1.56
HTT-209ENST00000512068 TRBV20-1A0A075B6N2 111 aa5.29□□□□□ -1.56
HTT-209ENST00000512068 NCR3O14931 201 aa5.29□□□□□ -1.56
HTT-209ENST00000512068 XAGE1AQ9HD64 81 aa5.29□□□□□ -1.56
HTT-209ENST00000512068 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.28□□□□□ -1.56
HTT-209ENST00000512068 TLX1NBP0CAT3 122 aa5.28□□□□□ -1.56
HTT-209ENST00000512068 GAGE2BQ13066 116 aa5.28□□□□□ -1.56
HTT-209ENST00000512068 ATXN8Q156A1 80 aa5.28□□□□□ -1.56
HTT-209ENST00000512068 C1orf134Q5TEV5 83 aa5.28□□□□□ -1.56
HTT-209ENST00000512068 LINC00337Q8N6G1 96 aa5.28□□□□□ -1.56
HTT-209ENST00000512068 NKAPP1Q8N9T2 125 aa5.28□□□□□ -1.56
HTT-209ENST00000512068 TMEM126AQ9H061 195 aa5.28□□□□□ -1.56
HTT-209ENST00000512068 IGKV2-28A0A075B6P5 120 aa5.27□□□□□ -1.57
HTT-209ENST00000512068 TRBV10-2A0A0K0K1G8 114 aa5.27□□□□□ -1.57
HTT-209ENST00000512068 SNCGO76070 127 aa5.27□□□□□ -1.57
HTT-209ENST00000512068 IGKV2D-28P01615 120 aa5.27□□□□□ -1.57
HTT-209ENST00000512068 CNBPP62633 177 aaKnown RBP5.27□□□□□ -1.57
HTT-209ENST00000512068 Q6ZRP5 223 aa5.26□□□□□ -1.57
HTT-209ENST00000512068 KRTAP4-9Q9BYQ8 210 aa5.26□□□□□ -1.57
HTT-209ENST00000512068 M0R378 163 aa5.25□□□□□ -1.57
HTT-209ENST00000512068 RPL28P46779 137 aaKnown RBP5.25□□□□□ -1.57
HTT-209ENST00000512068 WFDC2Q14508 124 aa5.25□□□□□ -1.57
HTT-209ENST00000512068 Q6ZR54 194 aa5.25□□□□□ -1.57
HTT-209ENST00000512068 SMIM11BQ8TCY0 68 aa5.25□□□□□ -1.57
HTT-209ENST00000512068 H0YGX0 51 aa5.24□□□□□ -1.57
HTT-209ENST00000512068 H3BMG7 143 aa5.24□□□□□ -1.57
HTT-209ENST00000512068 TCL1BO95988 128 aa5.24□□□□□ -1.57
HTT-209ENST00000512068 DNAL4O96015 105 aa5.24□□□□□ -1.57
HTT-209ENST00000512068 PRR3P79522 188 aaKnown RBP5.24□□□□□ -1.57
HTT-209ENST00000512068 Q6ZRN7 208 aaPredicted RBP5.24□□□□□ -1.57
HTT-209ENST00000512068 Q8N814 137 aa5.24□□□□□ -1.57
HTT-209ENST00000512068 DYNC2H1Q8NCM8 4307 aaKnown RBP5.24□□□□□ -1.57
HTT-209ENST00000512068 TRAV23DV6A0A075B6W5 121 aa5.23□□□□□ -1.57
HTT-209ENST00000512068 A0A087WTM6 91 aa5.23□□□□□ -1.57
HTT-209ENST00000512068 IGKV2-24A0A0C4DH68 120 aa5.23□□□□□ -1.57
HTT-209ENST00000512068 LRCOL1A6NCL2 159 aa5.23□□□□□ -1.57
HTT-209ENST00000512068 C16orf90A8MZG2 172 aa5.23□□□□□ -1.57
HTT-209ENST00000512068 F8W1H4 67 aa5.23□□□□□ -1.57
HTT-209ENST00000512068 VPREB1P12018 145 aa5.23□□□□□ -1.57
HTT-209ENST00000512068 C9orf129Q5T035 196 aaKnown RBP5.23□□□□□ -1.57
HTT-209ENST00000512068 LINC00474Q9P2X8 69 aa5.23□□□□□ -1.57
HTT-209ENST00000512068 DNAH7Q8WXX0 4024 aa5.22□□□□□ -1.57
HTT-209ENST00000512068 LST1O00453 97 aa5.22□□□□□ -1.57
HTT-209ENST00000512068 FAM19A5Q7Z5A7 132 aaPredicted RBP5.22□□□□□ -1.57
HTT-209ENST00000512068 CLEC2BQ92478 149 aa5.22□□□□□ -1.57
HTT-209ENST00000512068 DIRC1Q969H9 104 aa5.22□□□□□ -1.57
HTT-209ENST00000512068 TRBV10-3A0A0K0K1G6 114 aa5.21□□□□□ -1.58
HTT-209ENST00000512068 C9JAW5 83 aa5.21□□□□□ -1.58
HTT-209ENST00000512068 SLC25A20O43772 301 aa5.21□□□□□ -1.58
HTT-209ENST00000512068 IGLV6-57P01721 117 aa5.21□□□□□ -1.58
HTT-209ENST00000512068 KRTAP15-1Q3LI76 137 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms