RNA–Protein interactions for RNA: ENST00000511816.1

CALCOCO2-220, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 562 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-220ENST00000511816 KMT2BQ9UMN6 2715 aaPredicted RBP1.66□□□□□ -2.14
CALCOCO2-220ENST00000511816 GVQW2A0A096LPI5 108 aaPredicted RBP1.66□□□□□ -2.14
CALCOCO2-220ENST00000511816 LCE6AA0A183 80 aa1.66□□□□□ -2.14
CALCOCO2-220ENST00000511816 G3V318 75 aa1.66□□□□□ -2.14
CALCOCO2-220ENST00000511816 KRTAP12-4P60329 112 aa1.66□□□□□ -2.14
CALCOCO2-220ENST00000511816 DEFB103AP81534 67 aa1.66□□□□□ -2.14
CALCOCO2-220ENST00000511816 UBL5Q9BZL1 73 aa1.66□□□□□ -2.14
CALCOCO2-220ENST00000511816 DNAJC13O75165 2243 aa1.66□□□□□ -2.14
CALCOCO2-220ENST00000511816 SDK1Q7Z5N4 2213 aa1.66□□□□□ -2.14
CALCOCO2-220ENST00000511816 POLR1AO95602 1720 aaPredicted RBP1.66□□□□□ -2.14
CALCOCO2-220ENST00000511816 A0A096LNT2 108 aa1.65□□□□□ -2.15
CALCOCO2-220ENST00000511816 PRH1P02810 166 aa1.65□□□□□ -2.15
CALCOCO2-220ENST00000511816 SSBP3-AS1Q7Z2R9 100 aa1.65□□□□□ -2.15
CALCOCO2-220ENST00000511816 PIN1P1O15428 100 aa1.64□□□□□ -2.15
CALCOCO2-220ENST00000511816 LY6G6CO95867 125 aa1.64□□□□□ -2.15
CALCOCO2-220ENST00000511816 KRTAP13-4Q3LI77 160 aa1.64□□□□□ -2.15
CALCOCO2-220ENST00000511816 NCBP2-AS2Q69YL0 99 aa1.64□□□□□ -2.15
CALCOCO2-220ENST00000511816 ABCA5Q8WWZ7 1642 aa1.64□□□□□ -2.15
CALCOCO2-220ENST00000511816 ADCY10Q96PN6 1610 aa1.64□□□□□ -2.15
CALCOCO2-220ENST00000511816 ZFHX3Q15911 3703 aa1.64□□□□□ -2.15
CALCOCO2-220ENST00000511816 EFCAB6Q5THR3 1501 aa1.64□□□□□ -2.15
CALCOCO2-220ENST00000511816 A0A0G2JMZ2 1700 aa1.63□□□□□ -2.15
CALCOCO2-220ENST00000511816 MYO7AQ13402 2215 aa1.63□□□□□ -2.15
CALCOCO2-220ENST00000511816 LINC00959A0A1B0GUT2 108 aa1.63□□□□□ -2.15
CALCOCO2-220ENST00000511816 NDUFA4O00483 81 aa1.63□□□□□ -2.15
CALCOCO2-220ENST00000511816 COX7BP24311 80 aa1.63□□□□□ -2.15
CALCOCO2-220ENST00000511816 RPL38P63173 70 aaKnown RBP1.63□□□□□ -2.15
CALCOCO2-220ENST00000511816 TOMM5Q8N4H5 51 aa1.63□□□□□ -2.15
CALCOCO2-220ENST00000511816 C3P01024 1663 aa1.63□□□□□ -2.15
CALCOCO2-220ENST00000511816 SSC5DA1L4H1 1573 aa1.63□□□□□ -2.15
CALCOCO2-220ENST00000511816 IQGAP2Q13576 1575 aa1.63□□□□□ -2.15
CALCOCO2-220ENST00000511816 LY75O60449 1722 aa1.63□□□□□ -2.15
CALCOCO2-220ENST00000511816 KIAA0586Q9BVV6 1533 aa1.62□□□□□ -2.15
CALCOCO2-220ENST00000511816 ERCC6L2Q5T890 1561 aa1.62□□□□□ -2.15
CALCOCO2-220ENST00000511816 HMCN1Q96RW7 5635 aa1.62□□□□□ -2.15
CALCOCO2-220ENST00000511816 DOT1LQ8TEK3 1739 aa1.61□□□□□ -2.15
CALCOCO2-220ENST00000511816 RPL37P61927 97 aaKnown RBP1.61□□□□□ -2.15
CALCOCO2-220ENST00000511816 ANKRD36CQ5JPF3 1778 aa1.61□□□□□ -2.15
CALCOCO2-220ENST00000511816 SLIT1O75093 1534 aa1.61□□□□□ -2.15
CALCOCO2-220ENST00000511816 NCOA6Q14686 2063 aaPredicted RBP1.6□□□□□ -2.15
CALCOCO2-220ENST00000511816 UBE2DNLQ8IWF7 75 aa1.6□□□□□ -2.15
CALCOCO2-220ENST00000511816 LRRC37AA6NMS7 1700 aa1.6□□□□□ -2.15
CALCOCO2-220ENST00000511816 QSER1Q2KHR3 1735 aa1.6□□□□□ -2.15
CALCOCO2-220ENST00000511816 INTS1Q8N201 2190 aaKnown RBP1.59□□□□□ -2.15
CALCOCO2-220ENST00000511816 NRXN3Q9Y4C0 1643 aa1.59□□□□□ -2.15
CALCOCO2-220ENST00000511816 SERF2P84101 59 aa1.59□□□□□ -2.15
CALCOCO2-220ENST00000511816 NMES1Q9C002 83 aa1.59□□□□□ -2.15
CALCOCO2-220ENST00000511816 CMC2Q9NRP2 79 aa1.59□□□□□ -2.15
CALCOCO2-220ENST00000511816 TJP1Q07157 1748 aa1.59□□□□□ -2.16
CALCOCO2-220ENST00000511816 MED13LQ71F56 2210 aa1.58□□□□□ -2.16
CALCOCO2-220ENST00000511816 SPTY2D1-AS1A0A0U1RR47 76 aa1.58□□□□□ -2.16
CALCOCO2-220ENST00000511816 K7EMI3 77 aa1.58□□□□□ -2.16
CALCOCO2-220ENST00000511816 PCOTHQ58A44 107 aa1.58□□□□□ -2.16
CALCOCO2-220ENST00000511816 ABCC8Q09428 1581 aa1.58□□□□□ -2.16
CALCOCO2-220ENST00000511816 PRB1P04280 392 aa1.57□□□□□ -2.16
CALCOCO2-220ENST00000511816 NWD1Q149M9 1564 aa1.56□□□□□ -2.16
CALCOCO2-220ENST00000511816 FAM208AQ9UK61 1670 aaKnown RBP1.56□□□□□ -2.16
CALCOCO2-220ENST00000511816 ARL14EPLP0DKL9 152 aa1.56□□□□□ -2.16
CALCOCO2-220ENST00000511816 PLNP26678 52 aa1.56□□□□□ -2.16
CALCOCO2-220ENST00000511816 TULP4Q9NRJ4 1543 aa1.56□□□□□ -2.16
CALCOCO2-220ENST00000511816 F5P12259 2224 aa1.55□□□□□ -2.16
CALCOCO2-220ENST00000511816 ABCA1O95477 2261 aa1.55□□□□□ -2.16
CALCOCO2-220ENST00000511816 CPSF4LA6NMK7 179 aaKnown RBP1.55□□□□□ -2.16
CALCOCO2-220ENST00000511816 M0R1W7 72 aa1.55□□□□□ -2.16
CALCOCO2-220ENST00000511816 FXYD6P3P58550 94 aa1.55□□□□□ -2.16
CALCOCO2-220ENST00000511816 DEFB114Q30KQ6 69 aa1.55□□□□□ -2.16
CALCOCO2-220ENST00000511816 ABRACLQ9P1F3 81 aa1.55□□□□□ -2.16
CALCOCO2-220ENST00000511816 SORL1Q92673 2214 aa1.55□□□□□ -2.16
CALCOCO2-220ENST00000511816 AGLP35573 1532 aa1.55□□□□□ -2.16
CALCOCO2-220ENST00000511816 DDX60LQ5H9U9 1706 aaKnown RBP1.54□□□□□ -2.16
CALCOCO2-220ENST00000511816 PLXNB2O15031 1838 aa1.54□□□□□ -2.16
CALCOCO2-220ENST00000511816 ETDCA0A1B0GVM5 59 aa1.54□□□□□ -2.16
CALCOCO2-220ENST00000511816 ANGP03950 147 aaKnown RBP1.54□□□□□ -2.16
CALCOCO2-220ENST00000511816 KRTAP12-1P59990 96 aa1.54□□□□□ -2.16
CALCOCO2-220ENST00000511816 KRTAP21-3Q3LHN1 58 aa1.54□□□□□ -2.16
CALCOCO2-220ENST00000511816 KCNQ1DNQ9H478 68 aa1.54□□□□□ -2.16
CALCOCO2-220ENST00000511816 MRPL33O75394 65 aaKnown RBP1.53□□□□□ -2.16
CALCOCO2-220ENST00000511816 CACNA1CQ13936 2221 aa1.52□□□□□ -2.17
CALCOCO2-220ENST00000511816 TRPM2O94759 1503 aa1.51□□□□□ -2.17
CALCOCO2-220ENST00000511816 I3L3M4 83 aa1.51□□□□□ -2.17
CALCOCO2-220ENST00000511816 KRTAP21-2Q3LI59 83 aa1.51□□□□□ -2.17
CALCOCO2-220ENST00000511816 CRIPTQ9P021 101 aa1.51□□□□□ -2.17
CALCOCO2-220ENST00000511816 CACNA1BQ00975 2339 aa1.5□□□□□ -2.17
CALCOCO2-220ENST00000511816 SMIM27A0A1W2PRY6 76 aa1.5□□□□□ -2.17
CALCOCO2-220ENST00000511816 IGIPA6NJ69 53 aa1.5□□□□□ -2.17
CALCOCO2-220ENST00000511816 DEFB119Q8N690 84 aa1.5□□□□□ -2.17
CALCOCO2-220ENST00000511816 ANKRD17O75179 2603 aaKnown RBP1.5□□□□□ -2.17
CALCOCO2-220ENST00000511816 DEFB131BA0A096LNP1 70 aa1.49□□□□□ -2.17
CALCOCO2-220ENST00000511816 PIGYQ3MUY2 71 aa1.49□□□□□ -2.17
CALCOCO2-220ENST00000511816 USMG5Q96IX5 58 aa1.49□□□□□ -2.17
CALCOCO2-220ENST00000511816 TP53AIP1Q9HCN2 124 aa1.49□□□□□ -2.17
CALCOCO2-220ENST00000511816 ASCC3Q8N3C0 2202 aaKnown RBP1.49□□□□□ -2.17
CALCOCO2-220ENST00000511816 K7EIL1 84 aa1.48□□□□□ -2.17
CALCOCO2-220ENST00000511816 TIMM8BQ9Y5J9 83 aaPredicted RBP1.47□□□□□ -2.17
CALCOCO2-220ENST00000511816 TNRC6CQ9HCJ0 1690 aaKnown RBP1.47□□□□□ -2.17
CALCOCO2-220ENST00000511816 DEPDC5O75140 1603 aa1.47□□□□□ -2.17
CALCOCO2-220ENST00000511816 CADP27708 2225 aa1.47□□□□□ -2.17
CALCOCO2-220ENST00000511816 MUC6Q6W4X9 2439 aa1.47□□□□□ -2.17
CALCOCO2-220ENST00000511816 TOGARAM1Q9Y4F4 1720 aa1.46□□□□□ -2.18
CALCOCO2-220ENST00000511816 COX6B1P14854 86 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms