RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 CARHSP1Q9Y2V2 147 aaKnown RBP4.47□□□□□ -1.69
CCSER1-208ENST00000509109 TINCRA0A1B0GVN0 87 aa4.46□□□□□ -1.7
CCSER1-208ENST00000509109 SMIM1B2RUZ4 78 aa4.46□□□□□ -1.7
CCSER1-208ENST00000509109 H3BRM9 83 aa4.46□□□□□ -1.7
CCSER1-208ENST00000509109 ZNF861PO60384 105 aa4.46□□□□□ -1.7
CCSER1-208ENST00000509109 RPL28P46779 137 aaKnown RBP4.46□□□□□ -1.7
CCSER1-208ENST00000509109 KRTAP11-1Q8IUC1 163 aa4.46□□□□□ -1.7
CCSER1-208ENST00000509109 KRTAP7-1Q8IUC3 87 aa4.46□□□□□ -1.7
CCSER1-208ENST00000509109 COX7B2Q8TF08 81 aa4.46□□□□□ -1.7
CCSER1-208ENST00000509109 GNB1LQ9BYB4 327 aa4.46□□□□□ -1.7
CCSER1-208ENST00000509109 XAGE1AQ9HD64 81 aa4.46□□□□□ -1.7
CCSER1-208ENST00000509109 C22orf24Q9Y442 160 aa4.46□□□□□ -1.7
CCSER1-208ENST00000509109 IGLV5-45A0A087WSX0 123 aa4.45□□□□□ -1.7
CCSER1-208ENST00000509109 TMEM218A2RU14 115 aa4.45□□□□□ -1.7
CCSER1-208ENST00000509109 ATP5LO75964 103 aa4.45□□□□□ -1.7
CCSER1-208ENST00000509109 KRTAP1-4P0C5Y4 121 aa4.45□□□□□ -1.7
CCSER1-208ENST00000509109 PMVKQ15126 192 aa4.45□□□□□ -1.7
CCSER1-208ENST00000509109 KIAA1644Q3SXP7 199 aa4.45□□□□□ -1.7
CCSER1-208ENST00000509109 FA2HQ7L5A8 372 aa4.45□□□□□ -1.7
CCSER1-208ENST00000509109 NKAPP1Q8N9T2 125 aa4.45□□□□□ -1.7
CCSER1-208ENST00000509109 LINC01546A6NGU7 62 aa4.44□□□□□ -1.7
CCSER1-208ENST00000509109 BCE1O60756 84 aa4.44□□□□□ -1.7
CCSER1-208ENST00000509109 SEC11CQ9BY50 192 aa4.44□□□□□ -1.7
CCSER1-208ENST00000509109 LPAP08519 4548 aa4.44□□□□□ -1.7
CCSER1-208ENST00000509109 ADCYAP1P18509 176 aa4.43□□□□□ -1.7
CCSER1-208ENST00000509109 RHEBQ15382 184 aa4.43□□□□□ -1.7
CCSER1-208ENST00000509109 SFTA2Q6UW10 78 aa4.43□□□□□ -1.7
CCSER1-208ENST00000509109 CST9LQ9H4G1 147 aa4.43□□□□□ -1.7
CCSER1-208ENST00000509109 SPINK8P0C7L1 97 aa4.42□□□□□ -1.7
CCSER1-208ENST00000509109 CRYGAP11844 174 aa4.42□□□□□ -1.7
CCSER1-208ENST00000509109 FABP9Q0Z7S8 132 aa4.42□□□□□ -1.7
CCSER1-208ENST00000509109 PRR4Q16378 134 aa4.42□□□□□ -1.7
CCSER1-208ENST00000509109 SMIM29Q86T20 159 aa4.42□□□□□ -1.7
CCSER1-208ENST00000509109 RPL37AP8A6NKH3 93 aa4.41□□□□□ -1.7
CCSER1-208ENST00000509109 UBE2AP49459 152 aa4.41□□□□□ -1.7
CCSER1-208ENST00000509109 COX17Q14061 63 aa4.41□□□□□ -1.7
CCSER1-208ENST00000509109 LINC00167Q96N53 147 aa4.41□□□□□ -1.7
CCSER1-208ENST00000509109 HBDP02042 147 aa4.4□□□□□ -1.71
CCSER1-208ENST00000509109 IGLC3P0DOY3 106 aa4.4□□□□□ -1.71
CCSER1-208ENST00000509109 NDUFA6P56556 154 aa4.4□□□□□ -1.71
CCSER1-208ENST00000509109 RAB5BP61020 215 aa4.4□□□□□ -1.71
CCSER1-208ENST00000509109 RPL24P83731 157 aaKnown RBP4.4□□□□□ -1.71
CCSER1-208ENST00000509109 COMMD7Q86VX2 200 aa4.4□□□□□ -1.71
CCSER1-208ENST00000509109 TYMSOSQ8TAI1 123 aa4.4□□□□□ -1.71
CCSER1-208ENST00000509109 RPS10P5Q9NQ39 176 aa4.4□□□□□ -1.71
CCSER1-208ENST00000509109 MUC2Q02817 5179 aa4.39□□□□□ -1.71
CCSER1-208ENST00000509109 PFN2P35080 140 aa4.39□□□□□ -1.71
CCSER1-208ENST00000509109 FAM229BQ4G0N7 80 aa4.39□□□□□ -1.71
CCSER1-208ENST00000509109 ERG28Q9UKR5 140 aa4.39□□□□□ -1.71
CCSER1-208ENST00000509109 IGKV2-28A0A075B6P5 120 aa4.38□□□□□ -1.71
CCSER1-208ENST00000509109 A0A087X002 238 aa4.38□□□□□ -1.71
CCSER1-208ENST00000509109 A0A0U1RQV1 116 aa4.38□□□□□ -1.71
CCSER1-208ENST00000509109 IGKV2D-28P01615 120 aa4.38□□□□□ -1.71
CCSER1-208ENST00000509109 LINC00614P0C842 121 aa4.38□□□□□ -1.71
CCSER1-208ENST00000509109 ZNF22P17026 224 aaPredicted RBP4.38□□□□□ -1.71
CCSER1-208ENST00000509109 NDUFA5Q16718 116 aa4.38□□□□□ -1.71
CCSER1-208ENST00000509109 C10orf91Q5T1B1 145 aa4.38□□□□□ -1.71
CCSER1-208ENST00000509109 C18orf32Q8TCD1 76 aa4.38□□□□□ -1.71
CCSER1-208ENST00000509109 TRAPPC1Q9Y5R8 145 aa4.38□□□□□ -1.71
CCSER1-208ENST00000509109 IGKV2D-26A0A0A0MRZ7 120 aa4.37□□□□□ -1.71
CCSER1-208ENST00000509109 TSPAN13O95857 204 aa4.37□□□□□ -1.71
CCSER1-208ENST00000509109 TMEM170BQ5T4T1 132 aa4.37□□□□□ -1.71
CCSER1-208ENST00000509109 KRTAP5-1Q6L8H4 278 aa4.37□□□□□ -1.71
CCSER1-208ENST00000509109 KRTAP13-1Q8IUC0 172 aa4.37□□□□□ -1.71
CCSER1-208ENST00000509109 SND1-IT1Q9HBX3 110 aa4.37□□□□□ -1.71
CCSER1-208ENST00000509109 A0A096LNJ9 63 aa4.36□□□□□ -1.71
CCSER1-208ENST00000509109 CTAG1AP78358 180 aa4.36□□□□□ -1.71
CCSER1-208ENST00000509109 IFITM2Q01629 132 aa4.36□□□□□ -1.71
CCSER1-208ENST00000509109 FAM19A1Q7Z5A9 133 aa4.36□□□□□ -1.71
CCSER1-208ENST00000509109 BAGE3Q86Y29 109 aa4.36□□□□□ -1.71
CCSER1-208ENST00000509109 SVBPQ8N300 66 aa4.36□□□□□ -1.71
CCSER1-208ENST00000509109 LINC00304Q8N9R0 145 aa4.36□□□□□ -1.71
CCSER1-208ENST00000509109 TMEM126AQ9H061 195 aa4.36□□□□□ -1.71
CCSER1-208ENST00000509109 C11orf86A6NJI1 115 aa4.35□□□□□ -1.71
CCSER1-208ENST00000509109 SNAPINO95295 136 aa4.35□□□□□ -1.71
CCSER1-208ENST00000509109 PRLHP81277 87 aa4.35□□□□□ -1.71
CCSER1-208ENST00000509109 CHTOPQ9Y3Y2 248 aaKnown RBP4.35□□□□□ -1.71
CCSER1-208ENST00000509109 LINC00587B1AMM8 73 aa4.34□□□□□ -1.71
CCSER1-208ENST00000509109 ATP6V1G1O75348 118 aa4.34□□□□□ -1.71
CCSER1-208ENST00000509109 APOC3P02656 99 aa4.34□□□□□ -1.71
CCSER1-208ENST00000509109 LINC00158P58513 81 aa4.34□□□□□ -1.71
CCSER1-208ENST00000509109 S100A12P80511 92 aa4.34□□□□□ -1.71
CCSER1-208ENST00000509109 PMCHL1Q16048 86 aa4.34□□□□□ -1.71
CCSER1-208ENST00000509109 CBLN2Q8IUK8 224 aa4.34□□□□□ -1.71
CCSER1-208ENST00000509109 CHCHD1Q96BP2 118 aaKnown RBP4.34□□□□□ -1.71
CCSER1-208ENST00000509109 ZNF625Q96I27 306 aaPredicted RBP4.34□□□□□ -1.71
CCSER1-208ENST00000509109 ZNF706Q9Y5V0 76 aaPredicted RBP4.34□□□□□ -1.71
CCSER1-208ENST00000509109 TRAV12-1A0A0B4J245 112 aa4.33□□□□□ -1.72
CCSER1-208ENST00000509109 TMEM238C9JI98 176 aa4.33□□□□□ -1.72
CCSER1-208ENST00000509109 M0R378 163 aa4.33□□□□□ -1.72
CCSER1-208ENST00000509109 SCO1O75880 301 aa4.33□□□□□ -1.72
CCSER1-208ENST00000509109 TMEM223A0PJW6 202 aa4.32□□□□□ -1.72
CCSER1-208ENST00000509109 HERV-K104P63124 156 aa4.32□□□□□ -1.72
CCSER1-208ENST00000509109 KRTAP13-2Q52LG2 175 aa4.32□□□□□ -1.72
CCSER1-208ENST00000509109 MEIG1Q5JSS6 88 aa4.32□□□□□ -1.72
CCSER1-208ENST00000509109 IFI27L1Q96BM0 104 aa4.32□□□□□ -1.72
CCSER1-208ENST00000509109 HIGD2AQ9BW72 106 aa4.32□□□□□ -1.72
CCSER1-208ENST00000509109 MAP1LC3CQ9BXW4 147 aa4.32□□□□□ -1.72
CCSER1-208ENST00000509109 ANAPC11Q9NYG5 84 aa4.32□□□□□ -1.72
CCSER1-208ENST00000509109 HSBP1O75506 76 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms