RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 CADP27708 2225 aa0.79□□□□□ -2.28
DEPDC1B-204ENST00000509006 A0A0D9SG42 100 aa0.78□□□□□ -2.28
DEPDC1B-204ENST00000509006 CCL22O00626 93 aa0.78□□□□□ -2.28
DEPDC1B-204ENST00000509006 IFI6P09912 130 aa0.78□□□□□ -2.28
DEPDC1B-204ENST00000509006 NREPQ16612 68 aa0.78□□□□□ -2.28
DEPDC1B-204ENST00000509006 Q5BKY6 102 aa0.78□□□□□ -2.28
DEPDC1B-204ENST00000509006 DEFB123Q8N688 67 aa0.78□□□□□ -2.28
DEPDC1B-204ENST00000509006 AHNAK2Q8IVF2 5795 aa0.78□□□□□ -2.28
DEPDC1B-204ENST00000509006 PAPPAQ13219 1627 aa0.78□□□□□ -2.29
DEPDC1B-204ENST00000509006 NHSL1Q5SYE7 1610 aa0.78□□□□□ -2.29
DEPDC1B-204ENST00000509006 FXYD6-FXYD2A0A087WZ82 144 aa0.77□□□□□ -2.29
DEPDC1B-204ENST00000509006 LMTK2Q8IWU2 1503 aa0.77□□□□□ -2.29
DEPDC1B-204ENST00000509006 CEP170BQ9Y4F5 1589 aaPredicted RBP0.77□□□□□ -2.29
DEPDC1B-204ENST00000509006 PLCH1Q4KWH8 1693 aa0.77□□□□□ -2.29
DEPDC1B-204ENST00000509006 CFAP43Q8NDM7 1665 aa0.77□□□□□ -2.29
DEPDC1B-204ENST00000509006 RGPD1P0DJD0 1748 aa0.77□□□□□ -2.29
DEPDC1B-204ENST00000509006 COL14A1Q05707 1796 aaKnown RBP0.77□□□□□ -2.29
DEPDC1B-204ENST00000509006 AHCTF1Q8WYP5 2266 aa0.76□□□□□ -2.29
DEPDC1B-204ENST00000509006 QSER1Q2KHR3 1735 aa0.76□□□□□ -2.29
DEPDC1B-204ENST00000509006 ASXL1Q8IXJ9 1541 aa0.76□□□□□ -2.29
DEPDC1B-204ENST00000509006 RALGAPBQ86X10 1494 aa0.76□□□□□ -2.29
DEPDC1B-204ENST00000509006 CD163L1Q9NR16 1453 aa0.76□□□□□ -2.29
DEPDC1B-204ENST00000509006 CPSF4LA6NMK7 179 aaKnown RBP0.76□□□□□ -2.29
DEPDC1B-204ENST00000509006 I3L2K1 104 aa0.76□□□□□ -2.29
DEPDC1B-204ENST00000509006 MRPL33O75394 65 aaKnown RBP0.76□□□□□ -2.29
DEPDC1B-204ENST00000509006 COX6B1P14854 86 aa0.76□□□□□ -2.29
DEPDC1B-204ENST00000509006 KRTAP10-4P60372 401 aaPredicted RBP0.76□□□□□ -2.29
DEPDC1B-204ENST00000509006 COX6B2Q6YFQ2 88 aa0.76□□□□□ -2.29
DEPDC1B-204ENST00000509006 UBL5Q9BZL1 73 aa0.76□□□□□ -2.29
DEPDC1B-204ENST00000509006 ROS1P08922 2347 aa0.76□□□□□ -2.29
DEPDC1B-204ENST00000509006 ARFGEF2Q9Y6D5 1785 aa0.75□□□□□ -2.29
DEPDC1B-204ENST00000509006 NHSQ6T4R5 1651 aa0.75□□□□□ -2.29
DEPDC1B-204ENST00000509006 TIAM1Q13009 1591 aa0.75□□□□□ -2.29
DEPDC1B-204ENST00000509006 LCE6AA0A183 80 aa0.75□□□□□ -2.29
DEPDC1B-204ENST00000509006 FAM103A1Q9BTL3 118 aaKnown RBP0.75□□□□□ -2.29
DEPDC1B-204ENST00000509006 JMJD1CQ15652 2540 aa0.75□□□□□ -2.29
DEPDC1B-204ENST00000509006 TIAM2Q8IVF5 1701 aa0.75□□□□□ -2.29
DEPDC1B-204ENST00000509006 CICQ96RK0 1608 aaPredicted RBP0.75□□□□□ -2.29
DEPDC1B-204ENST00000509006 CCDC180Q9P1Z9 1646 aa0.75□□□□□ -2.29
DEPDC1B-204ENST00000509006 ASXL3Q9C0F0 2248 aa0.74□□□□□ -2.29
DEPDC1B-204ENST00000509006 FAM208BQ5VWN6 2430 aa0.74□□□□□ -2.29
DEPDC1B-204ENST00000509006 K7EQZ3 153 aa0.74□□□□□ -2.29
DEPDC1B-204ENST00000509006 NDUFA4O00483 81 aa0.74□□□□□ -2.29
DEPDC1B-204ENST00000509006 Q5VSD8 79 aa0.74□□□□□ -2.29
DEPDC1B-204ENST00000509006 HILPDAQ9Y5L2 63 aa0.74□□□□□ -2.29
DEPDC1B-204ENST00000509006 COL6A6A6NMZ7 2263 aa0.74□□□□□ -2.29
DEPDC1B-204ENST00000509006 POLR1AO95602 1720 aaPredicted RBP0.74□□□□□ -2.29
DEPDC1B-204ENST00000509006 USP32Q8NFA0 1604 aa0.74□□□□□ -2.29
DEPDC1B-204ENST00000509006 EIF2AK4Q9P2K8 1649 aaKnown RBP0.74□□□□□ -2.29
DEPDC1B-204ENST00000509006 CDC42BPGQ6DT37 1551 aa0.74□□□□□ -2.29
DEPDC1B-204ENST00000509006 ASH1LQ9NR48 2969 aaKnown RBP0.73□□□□□ -2.29
DEPDC1B-204ENST00000509006 SFTA3P0C7M3 94 aa0.73□□□□□ -2.29
DEPDC1B-204ENST00000509006 ABCA9Q8IUA7 1624 aa0.73□□□□□ -2.29
DEPDC1B-204ENST00000509006 THOC2Q8NI27 1593 aaKnown RBP0.73□□□□□ -2.29
DEPDC1B-204ENST00000509006 GOLGA4Q13439 2230 aaKnown RBP0.73□□□□□ -2.29
DEPDC1B-204ENST00000509006 SLIT1O75093 1534 aa0.73□□□□□ -2.29
DEPDC1B-204ENST00000509006 BCORQ6W2J9 1755 aa0.73□□□□□ -2.29
DEPDC1B-204ENST00000509006 EEA1Q15075 1411 aa0.72□□□□□ -2.29
DEPDC1B-204ENST00000509006 LAMC1P11047 1609 aa0.72□□□□□ -2.29
DEPDC1B-204ENST00000509006 BIVM-ERCC5R4GMW8 1640 aa0.72□□□□□ -2.29
DEPDC1B-204ENST00000509006 NWD1Q149M9 1564 aa0.72□□□□□ -2.29
DEPDC1B-204ENST00000509006 SPINK4O60575 86 aa0.72□□□□□ -2.29
DEPDC1B-204ENST00000509006 C3orf79P0CE67 100 aa0.72□□□□□ -2.29
DEPDC1B-204ENST00000509006 SERF2P84101 59 aa0.72□□□□□ -2.29
DEPDC1B-204ENST00000509006 MRPL34Q9BQ48 92 aaKnown RBP0.72□□□□□ -2.29
DEPDC1B-204ENST00000509006 ITSN1Q15811 1721 aa0.72□□□□□ -2.29
DEPDC1B-204ENST00000509006 PREX1Q8TCU6 1659 aa0.72□□□□□ -2.29
DEPDC1B-204ENST00000509006 MADDQ8WXG6 1647 aa0.71□□□□□ -2.3
DEPDC1B-204ENST00000509006 CDKN2A-AS1Q9UH64 79 aa0.71□□□□□ -2.3
DEPDC1B-204ENST00000509006 ZFHX3Q15911 3703 aa0.71□□□□□ -2.3
DEPDC1B-204ENST00000509006 ABCA10Q8WWZ4 1543 aa0.7□□□□□ -2.3
DEPDC1B-204ENST00000509006 WIZO95785 1651 aa0.7□□□□□ -2.3
DEPDC1B-204ENST00000509006 KRTAP5-10Q6L8G5 202 aa0.7□□□□□ -2.3
DEPDC1B-204ENST00000509006 ENHOQ6UWT2 76 aa0.7□□□□□ -2.3
DEPDC1B-204ENST00000509006 URB1O60287 2271 aaKnown RBP0.69□□□□□ -2.3
DEPDC1B-204ENST00000509006 DEFB131BA0A096LNP1 70 aa0.69□□□□□ -2.3
DEPDC1B-204ENST00000509006 K7EMI3 77 aa0.69□□□□□ -2.3
DEPDC1B-204ENST00000509006 DEFB114Q30KQ6 69 aa0.69□□□□□ -2.3
DEPDC1B-204ENST00000509006 SPINK6Q6UWN8 80 aa0.69□□□□□ -2.3
DEPDC1B-204ENST00000509006 HELZ2Q9BYK8 2649 aaKnown RBP0.69□□□□□ -2.3
DEPDC1B-204ENST00000509006 DIP2AQ14689 1571 aa0.69□□□□□ -2.3
DEPDC1B-204ENST00000509006 DOT1LQ8TEK3 1739 aa0.69□□□□□ -2.3
DEPDC1B-204ENST00000509006 ANKRD17O75179 2603 aaKnown RBP0.68□□□□□ -2.3
DEPDC1B-204ENST00000509006 NESP48681 1621 aa0.68□□□□□ -2.3
DEPDC1B-204ENST00000509006 LINC01549A6NIU2 74 aa0.68□□□□□ -2.3
DEPDC1B-204ENST00000509006 RICTORQ6R327 1708 aa0.68□□□□□ -2.3
DEPDC1B-204ENST00000509006 NMES1Q9C002 83 aa0.68□□□□□ -2.3
DEPDC1B-204ENST00000509006 KCNQ1DNQ9H478 68 aa0.68□□□□□ -2.3
DEPDC1B-204ENST00000509006 PARP4Q9UKK3 1724 aaKnown RBP0.68□□□□□ -2.3
DEPDC1B-204ENST00000509006 TSC2P49815 1807 aa0.68□□□□□ -2.3
DEPDC1B-204ENST00000509006 DDX60LQ5H9U9 1706 aaKnown RBP0.67□□□□□ -2.3
DEPDC1B-204ENST00000509006 PLXNC1O60486 1568 aa0.67□□□□□ -2.3
DEPDC1B-204ENST00000509006 ETDCA0A1B0GVM5 59 aa0.67□□□□□ -2.3
DEPDC1B-204ENST00000509006 SPRR1AP35321 89 aa0.67□□□□□ -2.3
DEPDC1B-204ENST00000509006 NCBP2-AS2Q69YL0 99 aa0.67□□□□□ -2.3
DEPDC1B-204ENST00000509006 DEFB105AQ8NG35 78 aa0.67□□□□□ -2.3
DEPDC1B-204ENST00000509006 FXYD6Q9H0Q3 95 aa0.67□□□□□ -2.3
DEPDC1B-204ENST00000509006 PRO3102Q9H379 93 aa0.67□□□□□ -2.3
DEPDC1B-204ENST00000509006 ZNF831Q5JPB2 1677 aa0.67□□□□□ -2.3
DEPDC1B-204ENST00000509006 TNRC6CQ9HCJ0 1690 aaKnown RBP0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms